Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1611 Acer truncatum HOM05D005275 ORTHO05D006435 3.8e-114 414.8 210 100.0
Ciclev10022175m.g Citrus clementina HOM05D005275 ORTHO05D006435 4.1e-92 341.7 216 77.3
Duzib114G0832 Durio zibethinus HOM05D005275 ORTHO05D006435 3.5e-83 312.0 219 71.7
PGR042G0357 Punica granatum HOM05D005275 ORTHO05D006435 2.5e-81 305.8 219 70.8
Ciclev10023889m.g Citrus clementina HOM05D005275 ORTHO05D006435 9.5e-81 303.9 218 70.2
CiPaw.06G045000 Carya illinoinensis HOM05D005275 ORTHO05D006435 2.8e-80 302.4 220 70.0
TWI39G0072 Tripterygium wilfordii HOM05D005275 ORTHO05D006435 1.1e-79 300.4 219 68.5
COL.COLO4_38546 Corchorus olitorius HOM05D005275 ORTHO05D006435 8.9e-79 297.4 217 70.5
Cpa.g.sc69.87 Carica papaya HOM05D005275 ORTHO05D006435 1.5e-78 296.6 220 65.0
Cfa016214 Carpinus fangiana HOM05D005275 ORTHO05D006435 7.5e-78 294.3 221 67.9
Eucgr.H01489 Eucalyptus grandis HOM05D005275 ORTHO05D006435 1.3e-77 293.5 221 67.9
QL09p007976 Quercus lobata HOM05D005275 ORTHO05D006435 1.4e-76 290.0 220 65.9
Thecc.10G105800 Theobroma cacao HOM05D005275 ORTHO05D006435 1.9e-76 289.7 205 71.7
THA.LOC104811989 Tarenaya hassleriana HOM05D005275 ORTHO05D006435 3.2e-76 288.9 205 68.8
Gorai.009G304100 Gossypium raimondii HOM05D005275 ORTHO05D006435 5.4e-76 288.1 221 66.5
Gohir.A05G287800 Gossypium hirsutum HOM05D005275 ORTHO05D006435 9.2e-76 287.3 221 66.1
CANSAT21G1202 Cannabis sativa HOM05D005275 ORTHO05D006435 2.7e-75 285.8 221 67.0
Gohir.D05G289000 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.5e-75 285.4 221 65.6
Carub.0008s1327 Capsella rubella HOM05D005275 ORTHO05D006435 7.8e-75 284.3 220 65.0
Thhalv10014627m.g Eutrema salsugineum HOM05D005275 ORTHO05D006435 1.3e-74 283.5 219 63.9
AL8G27700 Arabidopsis lyrata HOM05D005275 ORTHO05D006435 3.0e-74 282.3 220 64.1
Gohir.A10G201500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.0e-74 282.3 221 64.7
Gohir.A11G223000 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.0e-74 282.3 221 64.7
Gohir.A12G028500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.0e-74 282.3 221 64.7
Gohir.D01G152400 Gossypium hirsutum HOM05D005275 ORTHO05D006435 6.6e-74 281.2 221 64.7
Gohir.A12G115900 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.1e-73 280.4 221 64.3
Gohir.D05G384500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.1e-73 280.4 221 64.3
Potri.012G017300 Populus trichocarpa HOM05D005275 ORTHO05D006435 1.5e-73 280.0 222 63.5
Gohir.A04G061600 Gossypium hirsutum HOM05D005275 ORTHO05D006435 2.5e-73 279.3 221 64.3
Gohir.A08G051700 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.3e-73 278.5 221 63.8
RcHm_v2.0_Chr1g0381511 Rosa chinensis HOM05D005275 ORTHO05D006435 4.3e-73 278.5 223 64.6
AT5G53070 Arabidopsis thaliana HOM05D005275 ORTHO05D006435 5.6e-73 278.1 220 63.2
Manes.01G140200 Manihot esculenta HOM05D005275 ORTHO05D006435 5.6e-73 278.1 220 62.3
Sed0020778 Sechium edule HOM05D005275 ORTHO05D006435 5.6e-73 278.1 219 64.8
Potri.012G121228 Populus trichocarpa HOM05D005275 ORTHO05D006435 9.5e-73 277.3 222 62.6
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 1.6e-72 276.6 221 62.4
Lj8A623T20 Lonicera japonica HOM05D005275 ORTHO05D006435 6.2e-72 274.6 223 65.0
CSS0019342 Camellia sinensis var. sinensis HOM05D005275 ORTHO05D006435 8.1e-72 274.2 223 63.7
FAN10G0352 Fragaria x ananassa HOM05D005275 ORTHO05D006435 8.1e-72 274.2 219 63.9
BcaC04g20510 Brassica carinata HOM05D005275 ORTHO05D006435 1.4e-71 273.5 219 62.1
C09p42780 Brassica napus HOM05D005275 ORTHO05D006435 1.4e-71 273.5 219 62.1
CARHR266090 Cardamine hirsuta HOM05D005275 ORTHO05D006435 1.4e-71 273.5 220 61.8
ClCG05G009030 Citrullus lanatus HOM05D005275 ORTHO05D006435 1.4e-71 273.5 219 63.9
Sp6g15240 Schrenkiella parvula HOM05D005275 ORTHO05D006435 1.4e-71 273.5 219 62.6
Sed0013694 Sechium edule HOM05D005275 ORTHO05D006435 1.4e-71 273.5 219 63.9
BcaC03g14459 Brassica carinata HOM05D005275 ORTHO05D006435 2.3e-71 272.7 219 61.6
A02p11320 Brassica napus HOM05D005275 ORTHO05D006435 3.1e-71 272.3 219 61.6
BraA02t06194Z Brassica rapa HOM05D005275 ORTHO05D006435 3.1e-71 272.3 219 61.6
HanXRQChr16g0505961 Helianthus annuus HOM05D005275 ORTHO05D006435 3.1e-71 272.3 216 63.9
Lalb_Chr22g0360521 Lupinus albus HOM05D005275 ORTHO05D006435 3.1e-71 272.3 221 63.8
BcaB05g22006 Brassica carinata HOM05D000442 ORTHO05D007032 4.0e-71 271.9 219 61.2
BcaB08g35669 Brassica carinata HOM05D005275 ORTHO05D006435 6.8e-71 271.2 219 61.2
A10p10560 Brassica napus HOM05D005275 ORTHO05D006435 6.8e-71 271.2 219 61.6
C02p18700 Brassica napus HOM05D005275 ORTHO05D006435 6.8e-71 271.2 219 61.6
CsaV3_3G019750 Cucumis sativus L. HOM05D005275 ORTHO05D006435 8.9e-71 270.8 219 64.8
Glyma.06G288700 Glycine max HOM05D005275 ORTHO05D006435 8.9e-71 270.8 223 61.9
HanXRQChr04g0128021 Helianthus annuus HOM05D005275 ORTHO05D006435 8.9e-71 270.8 216 64.8
Hma1.2p1_1507F.1_g287690 Hydrangea macrophylla HOM05D005275 ORTHO05D006435 8.9e-71 270.8 209 64.1
Psat7g227360 Pisum sativum HOM05D005275 ORTHO05D006435 8.9e-71 270.8 223 62.8
Glyma.16G061500 Glycine max HOM05D005275 ORTHO05D006435 2.0e-70 269.6 223 61.0
Glyma.19G085300 Glycine max HOM05D005275 ORTHO05D006435 2.0e-70 269.6 223 61.4
Haze_00229 Corylus avellana HOM05D005275 ORTHO05D006435 2.6e-70 269.2 220 64.5
FAN01G0712 Fragaria x ananassa HOM05D000442 ORTHO05D007032 2.6e-70 269.2 192 68.8
Lj3g0024506 Lotus japonicus HOM05D005275 ORTHO05D006435 3.4e-70 268.9 223 62.8
Phvul.008G150700 Phaseolus vulgaris HOM05D005275 ORTHO05D006435 4.4e-70 268.5 223 61.9
BraA10t43140Z Brassica rapa HOM05D005275 ORTHO05D006435 5.8e-70 268.1 219 60.7
TPR.G34143 Trifolium pratense HOM05D005275 ORTHO05D006435 5.8e-70 268.1 223 61.0
Ca_10483_v3 Cicer arietinum L. HOM05D005275 ORTHO05D006435 7.5e-70 267.7 223 61.9
FAN10G2096 Fragaria x ananassa HOM05D000442 ORTHO05D007032 7.5e-70 267.7 192 68.8
BolC9t57154H Brassica oleracea HOM05D005275 ORTHO05D006435 2.2e-69 266.2 227 59.9
Lsat_1_v5_gn_7_91160 Lactuca sativa HOM05D005275 ORTHO05D006435 2.2e-69 266.2 222 62.6
GSVIVG01038570001 Vitis vinifera HOM05D005275 ORTHO05D006435 3.7e-69 265.4 220 61.8
Cc01_g04130 Coffea canephora HOM05D005275 ORTHO05D006435 6.4e-69 264.6 213 64.8
arahy.Tifrunner.gnm1.ann1.T9K8GJ Arachis hypogaea HOM05D005275 ORTHO05D006435 1.4e-68 263.5 222 61.3
Sabra12G0015200 Salix brachista HOM05D005275 ORTHO05D007032 1.4e-68 263.5 251 56.2
arahy.Tifrunner.gnm1.ann1.AF7P3K Arachis hypogaea HOM05D005275 ORTHO05D006435 4.1e-68 261.9 222 60.4
BolC2t08015H Brassica oleracea HOM05D005275 ORTHO05D006435 5.4e-68 261.5 233 57.9
Nn8g39914 Nelumbo nucifera HOM05D005275 ORTHO05D006435 5.4e-68 261.5 219 62.1
arahy.Tifrunner.gnm1.ann1.5IWG5U Arachis hypogaea HOM05D005275 ORTHO05D006435 7.1e-68 261.2 222 60.8
ECA236G4645 Erigeron canadensis HOM05D005275 ORTHO05D006435 4.6e-67 258.5 219 60.7
MD07G1293600 Malus domestica HOM05D005275 ORTHO05D006435 1.0e-66 257.3 225 62.2
Aqoxy7G03390 Aquilegia oxysepala HOM05D005275 ORTHO05D006435 1.7e-66 256.5 219 62.6
Medtr5g038540 Medicago truncatula HOM05D005275 ORTHO05D006435 1.7e-66 256.5 223 59.2
PSO421G0063 Papaver somniferum HOM05D005275 ORTHO05D006435 6.6e-66 254.6 217 61.8
Medtr1g067700 Medicago truncatula HOM05D005275 ORTHO05D006435 1.1e-65 253.8 225 58.2
Prupe.2G313400 Prunus persica HOM05D005275 ORTHO05D006435 1.1e-65 253.8 222 58.1
DCAR_008951 Daucus carota HOM05D005275 ORTHO05D006435 1.5e-65 253.4 212 62.3
Actinidia34231 Actinidia chinensis HOM05D005275 ORTHO05D006435 2.5e-65 252.7 200 64.5
MSTRG.48 Avicennia marina HOM05D005275 ORTHO05D006435 3.3e-65 252.3 210 62.4
vmacro06395 Vaccinium macrocarpon HOM05D005275 ORTHO05D006435 3.3e-65 252.3 247 55.9
Gohir.D09G028700 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.3e-65 251.9 189 66.7
Oeu060995.2 Olea europaea HOM05D005275 ORTHO05D006435 4.3e-65 251.9 212 61.8
EL10Ac3g05547 Beta vulgaris HOM05D005275 ORTHO05D006435 8.1e-64 247.7 221 58.4
Solyc05g032880.3 Solanum lycopersicum HOM05D005275 ORTHO05D006435 4.0e-63 245.4 230 57.4
Sopen05g023270 Solanum pennellii HOM05D005275 ORTHO05D006435 5.2e-63 245.0 230 56.5
Rhsim03G0210600 Rhododendron simsii HOM05D005275 ORTHO05D006435 6.8e-63 244.6 268 52.6
Migut.F01020 Erythranthe guttata HOM05D005275 ORTHO05D006435 1.5e-62 243.4 210 60.5
Nitab4.5_0004499g0010 Nicotiana tabacum HOM05D005275 ORTHO05D006435 2.0e-62 243.0 196 61.2
Sc02g0003260 Simmondsia chinensis HOM05D005275 ORTHO05D006435 3.4e-62 242.3 239 56.1
Nitab4.5_0000006g0650 Nicotiana tabacum HOM05D005275 ORTHO05D006435 4.4e-62 241.9 196 61.2
MBI14_g34252_MAGBIO Magnolia biondii HOM05D005275 ORTHO05D006435 1.7e-61 240.0 219 60.3
Peaxi162Scf00251g01010 Petunia axillaris HOM05D005275 ORTHO05D006435 3.8e-61 238.8 223 57.0
Peaxi162Scf00581g00021 Petunia axillaris HOM05D005275 ORTHO05D006435 3.8e-61 238.8 250 52.4
AUR62002807 Chenopodium quinoa HOM05D005275 ORTHO05D006435 8.4e-61 237.7 220 56.4
TAR374G1406 Trochodendron aralioides HOM05D005275 ORTHO05D006435 1.4e-60 236.9 184 64.7
Actinidia08664 Actinidia chinensis HOM05D005275 ORTHO05D006435 9.3e-60 234.2 179 66.5
SHI02356 Sapria himalayana HOM05D005275 ORTHO05D006435 2.1e-59 233.0 233 50.6
Hund20626 Selenicereus undatus HOM05D005275 ORTHO05D006435 2.7e-59 232.6 215 57.7
Gohir.A07G020100 Gossypium hirsutum HOM05D005275 ORTHO05D006435 2.5e-57 226.1 164 67.7
PSO675G7727 Papaver somniferum HOM05D005275 ORTHO05D006435 7.3e-57 224.6 212 58.0
AUR62014115 Chenopodium quinoa HOM05D005275 ORTHO05D006435 6.2e-56 221.5 266 48.5
Ah.13g074120 Amaranthus hybridus HOM05D000770 ORTHO05D000586 9.0e-55 217.6 233 52.4
CDE01G0034 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 2.0e-54 216.5 208 57.2
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 9.9e-54 214.2 165 64.8
Lj1C1021T21 Lonicera japonica HOM05D005275 ORTHO05D006435 3.8e-53 212.2 207 57.5
HPP92_008880 Vanilla planifolia HOM05D005275 ORTHO05D006435 6.4e-53 211.5 195 58.5
ATR0564G295 Amborella trichopoda HOM05D005275 ORTHO05D006435 1.1e-52 210.7 204 57.8
arahy.Tifrunner.gnm1.ann1.G3VF9V Arachis hypogaea HOM05D005275 ORTHO05D006435 1.4e-52 210.3 346 39.0
Os05g0528900 Oryza sativa ssp. japonica HOM05D005275 ORTHO05D006435 1.9e-52 209.9 198 56.1
SGA_v2.0_scaffold55G19785 Striga asiatica HOM05D005275 ORTHO05D006435 3.5e-51 205.7 185 58.9
MELO3C019369.2 Cucumis melo HOM05D005275 ORTHO05D006435 5.3e-47 191.8 148 66.2
Zm00001eb199670 Zea mays HOM05D005275 ORTHO05D006435 5.3e-47 191.8 266 44.4
Gohir.A12G032500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 6.9e-47 191.4 148 64.2
Gohir.A10G000100 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.9e-44 183.3 154 63.0
Duzib128G1952 Durio zibethinus HOM05D005275 ORTHO05D006435 3.5e-43 179.1 137 68.6
VMungo1383G0294 Vigna mungo HOM05D005275 ORTHO05D006435 1.0e-42 177.6 177 54.2
CDE02G4591 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 3.9e-42 175.6 189 55.6
Hma1.2p1_1507F.1_g287680 Hydrangea macrophylla HOM05D005275 ORTHO05D006435 4.8e-40 168.7 134 63.4
Aa31LG3G9400 Aethionema arabicum HOM05D005275 ORTHO05D006435 3.1e-39 166.0 144 61.1
PGSC0003DMG400005324 Solanum tuberosum HOM05D005275 ORTHO05D006435 4.0e-39 165.6 192 50.0
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 1.0e-37 161.0 127 66.1
Sc20g0002940 Simmondsia chinensis HOM05D005275 ORTHO05D006435 3.8e-37 159.1 143 60.8
unitig_62.g23847 Utricularia gibba HOM05D002066 ORTHO05D001617 3.2e-36 156.0 157 56.7
FvH4_7g32000 Fragaria vesca HOM05D005275 ORTHO05D006435 1.6e-35 153.7 133 61.7
Ciclev10024016m.g Citrus clementina HOM05D005275 ORTHO05D006435 1.9e-33 146.7 90 76.7
Dinv21061 Davidia involucrata HOM05D005275 ORTHO05D006435 1.3e-32 144.1 96 75.0
Oeu037051.1 Olea europaea HOM05D005275 ORTHO05D006435 6.5e-29 131.7 127 55.1
Pp3c9_14000 Physcomitrium patens HOM05D005275 ORTHO05D006435 2.3e-26 123.2 191 41.4
SMO334G0054 Selaginella moellendorffii HOM05D005275 ORTHO05D006435 2.5e-25 119.8 180 38.3
Mapoly0074s0056 Marchantia polymorpha HOM05D005275 ORTHO05D006435 1.4e-23 114.0 182 35.7
SEGI_07593 Sequoiadendron giganteum HOM05D005275 ORTHO05D006435 2.2e-21 106.7 113 52.2
CBR_g30099 Chara braunii HOM05D005275 ORTHO05D006435 5.0e-21 105.5 186 34.4
Ciclev10023389m.g Citrus clementina HOM05D005275 ORTHO05D006435 1.6e-19 100.5 68 64.7
Lsat_1_v5_gn_9_70281 Lactuca sativa HOM05D005275 ORTHO05D006435 7.9e-19 98.2 151 41.7
Sc21g0003940 Simmondsia chinensis HOM05D007402 ORTHO05D003673 3.9e-18 95.9 142 47.9
Zm00001eb397120 Zea mays HOM05D005275 ORTHO05D006435 1.3e-16 90.9 90 53.3
Zm00001eb089870 Zea mays HOM05D005275 ORTHO05D006435 1.4e-15 87.4 98 48.0
Aqoxy2G00110 Aquilegia oxysepala HOM05D005275 ORTHO05D006435 1.7e-13 80.5 63 61.9
QL09p008105 Quercus lobata HOM05D005275 ORTHO05D006435 4.2e-12 75.9 50 66.0
AagrBONN_evm.TU.Sc2ySwM_228.762 Anthoceros agrestis HOM05D005275 ORTHO05D006435 6.1e-11 72.0 151 35.1
MCO07G577 Micromonas commoda HOM05D005275 ORTHO05D006435 3.0e-10 69.7 183 32.2
arahy.Tifrunner.gnm1.ann1.6AA68Y Arachis hypogaea HOM05D001355 ORTHO05D006435 2.0e-06 57.0 93 40.9
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 7.7e-06 55.1 173 30.6
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 7.7e-06 55.1 173 30.6


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