Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01887 Aquilegia oxysepala HOM05D004102 ORTHO05D005307 1.7e-135 486.1 266 100.0
Aqoxy5G00225 Aquilegia oxysepala HOM05D004102 ORTHO05D005307 2.6e-59 233.0 276 55.1
TWI18G1245 Tripterygium wilfordii HOM05D004102 ORTHO05D005307 7.9e-48 194.9 275 45.1
Sed0028046 Sechium edule HOM05D004102 ORTHO05D005307 1.6e-40 170.6 275 41.5
ClCG09G008240 Citrullus lanatus HOM05D004102 ORTHO05D005307 1.8e-39 167.2 217 47.9
SHI09769 Sapria himalayana HOM05D004102 ORTHO05D005307 9.7e-38 161.4 275 43.3
Nn3g19665 Nelumbo nucifera HOM05D004102 ORTHO05D005307 2.8e-37 159.8 259 44.0
CsaV3_7G026800 Cucumis sativus L. HOM05D004102 ORTHO05D005307 8.2e-37 158.3 238 44.1
MELO3C012730.2 Cucumis melo HOM05D004102 ORTHO05D005307 3.4e-35 152.9 238 42.9
ATR0827G015 Amborella trichopoda HOM05D004102 ORTHO05D005307 2.5e-33 146.7 275 40.7
VMungo0720G2324 Vigna mungo HOM05D004102 ORTHO05D005307 1.2e-32 144.4 267 40.1
TAR362G0337 Trochodendron aralioides HOM05D004102 ORTHO05D005307 4.6e-32 142.5 224 42.9
Medtr1g069910 Medicago truncatula HOM05D004102 ORTHO05D005307 6.7e-31 138.7 266 36.5
Phvul.007G192600 Phaseolus vulgaris HOM05D004102 ORTHO05D005307 1.1e-30 137.9 275 39.3
DCAR_005687 Daucus carota HOM05D004102 ORTHO05D005307 7.4e-30 135.2 231 40.3
CANSAT01G2283 Cannabis sativa HOM05D004102 ORTHO05D005307 9.7e-30 134.8 276 36.2
MBI07_g16928_MAGBIO Magnolia biondii HOM05D004102 ORTHO05D005307 1.7e-29 134.0 244 40.2
Actinidia07299 Actinidia chinensis HOM05D004102 ORTHO05D005307 2.8e-29 133.3 262 38.5
Cfa002432 Carpinus fangiana HOM05D004102 ORTHO05D005307 4.8e-29 132.5 248 39.5
COL.COLO4_03878 Corchorus olitorius HOM05D004102 ORTHO05D005307 4.8e-29 132.5 269 36.1
COL.COLO4_04038 Corchorus olitorius HOM05D004102 ORTHO05D005307 4.8e-29 132.5 269 36.1
EL10As5g23471 Beta vulgaris HOM05D004102 ORTHO05D005307 8.2e-29 131.7 238 38.7
Ca_09679_v3 Cicer arietinum L. HOM05D004102 ORTHO05D005307 8.2e-29 131.7 267 36.0
Haze_24635 Corylus avellana HOM05D004102 ORTHO05D005307 1.1e-28 131.3 239 41.0
Lj5g0004279 Lotus japonicus HOM05D004102 ORTHO05D005307 1.1e-28 131.3 259 37.5
AagrBONN_evm.TU.Sc2ySwM_344.1414__1415 Anthoceros agrestis HOM05D004102 ORTHO05D005307 1.4e-28 131.0 237 37.6
PGR031G2496 Punica granatum HOM05D004102 ORTHO05D005307 1.8e-28 130.6 259 37.1
Atru.chr5.1694 Acer truncatum HOM05D004102 ORTHO05D005307 3.1e-28 129.8 266 36.1
PSO832G3143 Papaver somniferum HOM05D004102 ORTHO05D005307 3.1e-28 129.8 230 39.1
Lj1A67T41 Lonicera japonica HOM05D004102 ORTHO05D005307 9.1e-28 128.3 257 38.1
Migut.N02206 Erythranthe guttata HOM05D004102 ORTHO05D005307 2.0e-27 127.1 247 37.7
CiPaw.03G264900 Carya illinoinensis HOM05D004102 ORTHO05D005307 2.6e-27 126.7 248 37.9
Medtr1g058610 Medicago truncatula HOM05D004102 ORTHO05D005307 5.9e-27 125.6 176 44.9
PSO210G1261 Papaver somniferum HOM05D004102 ORTHO05D005307 1.0e-26 124.8 230 37.8
CDE03G0492 Ceratophyllum demersum HOM05D004102 ORTHO05D005307 2.2e-26 123.6 227 39.6
Lalb_Chr06g0170471 Lupinus albus HOM05D004102 ORTHO05D005307 2.9e-26 123.2 275 36.7
Oeu025851.5 Olea europaea HOM05D004102 ORTHO05D005307 6.5e-26 122.1 276 35.1
Ciclev10024065m.g Citrus clementina HOM05D004102 ORTHO05D005307 8.5e-26 121.7 256 35.9
Dinv34632 Davidia involucrata HOM05D004102 ORTHO05D005307 1.4e-25 120.9 264 36.4
FAN20G2335 Fragaria x ananassa HOM05D004102 ORTHO05D005307 1.4e-25 120.9 269 34.2
Lj2g0002321 Lotus japonicus HOM05D004102 ORTHO05D005307 1.4e-25 120.9 168 46.4
Ah.11g049770 Amaranthus hybridus HOM05D004102 ORTHO05D005307 2.7e-24 116.7 241 35.7
Duzib138G0514 Durio zibethinus HOM05D004102 ORTHO05D005307 2.7e-24 116.7 246 35.4
Thecc.01G257700 Theobroma cacao HOM05D004102 ORTHO05D005307 2.7e-24 116.7 242 35.5
CSS0001085 Camellia sinensis var. sinensis HOM05D004102 ORTHO05D005307 4.7e-24 115.9 261 35.6
Nitab4.5_0000470g0060 Nicotiana tabacum HOM05D004102 ORTHO05D005307 4.7e-24 115.9 242 36.4
Potri.005G224900 Populus trichocarpa HOM05D004102 ORTHO05D005307 4.7e-24 115.9 230 37.4
Nitab4.5_0006457g0030 Nicotiana tabacum HOM05D004102 ORTHO05D005307 7.9e-24 115.2 241 36.5
TPR.G23973 Trifolium pratense HOM05D004102 ORTHO05D005307 1.4e-23 114.4 216 37.5
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 1.8e-23 114.0 220 36.4
arahy.Tifrunner.gnm1.ann1.3W1S0R Arachis hypogaea HOM05D004102 ORTHO05D005307 2.3e-23 113.6 231 35.9
Gohir.D07G219350 Gossypium hirsutum HOM05D004102 ORTHO05D005307 3.0e-23 113.2 223 35.9
Gorai.001G253800 Gossypium raimondii HOM05D004102 ORTHO05D005307 3.0e-23 113.2 223 35.9
Os12g0641500 Oryza sativa ssp. japonica HOM05D004102 ORTHO05D005307 1.1e-22 111.3 276 33.0
FAN27G0190 Fragaria x ananassa HOM05D004102 ORTHO05D005307 3.3e-22 109.8 270 33.0
Aa31sc35G50 Aethionema arabicum HOM05D004102 ORTHO05D005307 4.4e-22 109.4 275 33.1
Pp3c12_10030 Physcomitrium patens HOM05D004102 ORTHO05D005307 5.7e-22 109.0 218 35.8
Eucgr.B01550 Eucalyptus grandis HOM05D004102 ORTHO05D005307 9.7e-22 108.2 256 33.6
Glyma.10G037300 Glycine max HOM05D004102 ORTHO05D005307 9.7e-22 108.2 252 36.1
arahy.Tifrunner.gnm1.ann1.KRWI3G Arachis hypogaea HOM05D004102 ORTHO05D005307 2.8e-21 106.7 231 33.8
ECA236G1622 Erigeron canadensis HOM05D004102 ORTHO05D005307 6.3e-21 105.5 210 36.2
SEGI_02214 Sequoiadendron giganteum HOM05D004102 ORTHO05D005307 6.3e-21 105.5 226 36.7
Glyma.13G123700 Glycine max HOM05D004102 ORTHO05D005307 8.2e-21 105.1 252 35.7
Manes.12G032800 Manihot esculenta HOM05D004102 ORTHO05D005307 8.2e-21 105.1 250 34.4
MD10G1183700 Malus domestica HOM05D004102 ORTHO05D005307 6.9e-20 102.1 220 34.1
Mapoly0107s0024 Marchantia polymorpha HOM05D004102 ORTHO05D005307 6.9e-20 102.1 249 32.9
Sc17g0000640 Simmondsia chinensis HOM05D004102 ORTHO05D005307 2.6e-19 100.1 219 35.2
Cc01_g18290 Coffea canephora HOM05D004102 ORTHO05D005307 3.4e-19 99.8 254 33.5
SGA_v2.0_scaffold2G00877 Striga asiatica HOM05D004102 ORTHO05D005307 3.4e-19 99.8 260 33.1
vmacro02666 Vaccinium macrocarpon HOM05D004102 ORTHO05D005307 7.7e-19 98.6 279 30.5
HanXRQChr02g0038071 Helianthus annuus HOM05D004102 ORTHO05D005307 3.8e-18 96.3 207 35.3
MD05G1196500 Malus domestica HOM05D004102 ORTHO05D005307 3.8e-18 96.3 223 32.3
Cpa.g.sc50.12 Carica papaya HOM05D004102 ORTHO05D005307 5.0e-18 95.9 236 34.7
Zm00001eb038490 Zea mays HOM05D004102 ORTHO05D005307 1.1e-17 94.7 225 32.0
AUR62011867 Chenopodium quinoa HOM05D004102 ORTHO05D005307 1.4e-17 94.4 225 33.3
Thhalv10010074m.g Eutrema salsugineum HOM05D004102 ORTHO05D005307 4.2e-17 92.8 265 30.2
Rhsim13G0035400 Rhododendron simsii HOM05D004102 ORTHO05D005307 4.2e-17 92.8 330 28.8
Duzib133G0778 Durio zibethinus HOM05D004102 ORTHO05D005307 9.4e-17 91.7 229 32.8
AUR62024710 Chenopodium quinoa HOM05D004102 ORTHO05D005307 2.1e-16 90.5 225 32.9
CAN.G771.28 Capsicum annuum HOM05D004102 ORTHO05D005307 1.0e-15 88.2 226 33.6
Lsat_1_v5_gn_8_92740 Lactuca sativa HOM05D004102 ORTHO05D005307 1.0e-15 88.2 209 33.0
Sabra05G0173500 Salix brachista HOM05D004102 ORTHO05D005307 1.0e-15 88.2 300 29.3
FvH4_2g21371 Fragaria vesca HOM05D004102 ORTHO05D005307 3.0e-15 86.7 270 30.0
FAN24G0573 Fragaria x ananassa HOM05D004102 ORTHO05D005307 3.0e-15 86.7 270 30.0
Hma1.2p1_0273F.1_g109650 Hydrangea macrophylla HOM05D004102 ORTHO05D005307 3.0e-15 86.7 261 32.2
Solyc06g083870.3 Solanum lycopersicum HOM05D004102 ORTHO05D005307 3.9e-15 86.3 224 34.4
Sopen06g035270 Solanum pennellii HOM05D004102 ORTHO05D005307 3.9e-15 86.3 224 34.4
HPP92_014765 Vanilla planifolia HOM05D004102 ORTHO05D005307 2.6e-14 83.6 203 35.5
unitig_37.g12599 Utricularia gibba HOM05D001236 ORTHO05D005307 4.4e-14 82.8 258 32.2
AL5G35750 Arabidopsis lyrata HOM05D004102 ORTHO05D005307 1.3e-13 81.3 275 27.6
RcHm_v2.0_Chr6g0287971 Rosa chinensis HOM05D004102 ORTHO05D005307 2.2e-13 80.5 271 29.5
Peaxi162Scf00013g01122 Petunia axillaris HOM05D004102 ORTHO05D005307 2.8e-13 80.1 217 33.6
MSTRG.12532 Avicennia marina HOM05D004102 ORTHO05D005307 3.7e-13 79.7 236 30.9
C08p29820 Brassica napus HOM05D004102 ORTHO05D005307 4.8e-13 79.3 232 29.7
BolC8t50593H Brassica oleracea HOM05D004102 ORTHO05D005307 4.8e-13 79.3 232 29.7
THA.LOC104798817 Tarenaya hassleriana HOM05D004102 ORTHO05D005307 8.2e-13 78.6 94 47.9
A09p47620 Brassica napus HOM05D004102 ORTHO05D005307 1.1e-12 78.2 232 29.7
BraA09t40218Z Brassica rapa HOM05D004102 ORTHO05D005307 1.1e-12 78.2 232 29.7
Peaxi162Scf00855g00004 Petunia axillaris HOM05D004102 ORTHO05D005307 1.1e-12 78.2 218 31.7
Psat6g041920 Pisum sativum HOM05D004102 ORTHO05D005307 1.1e-12 78.2 266 27.8
QL09p038899 Quercus lobata HOM05D004102 ORTHO05D005307 3.1e-12 76.6 70 61.4
CARHR164590 Cardamine hirsuta HOM05D004102 ORTHO05D005307 5.3e-12 75.9 239 28.5
BraA03t13511Z Brassica rapa HOM05D004102 ORTHO05D005307 2.6e-11 73.6 230 29.1
A03p43760 Brassica napus HOM05D004102 ORTHO05D005307 3.5e-11 73.2 226 29.2
Prupe.8G222900 Prunus persica HOM05D004102 ORTHO05D005307 4.5e-11 72.8 265 29.4
AT3G54670 Arabidopsis thaliana HOM05D004102 ORTHO05D005307 7.7e-11 72.0 271 26.2
C03p53990 Brassica napus HOM05D004102 ORTHO05D005307 1.0e-10 71.6 249 28.1
Sp5g07780 Schrenkiella parvula HOM05D004102 ORTHO05D005307 1.0e-10 71.6 255 26.7
Medtr0003s0460 Medicago truncatula HOM05D004102 ORTHO05D005307 2.9e-10 70.1 262 29.4
TPR.G24931 Trifolium pratense HOM05D004102 ORTHO05D005307 5.0e-10 69.3 253 29.2
Gohir.A07G213200 Gossypium hirsutum HOM05D004102 ORTHO05D005307 6.5e-10 68.9 240 27.9
Carub.0005s2127 Capsella rubella HOM05D004102 ORTHO05D005307 1.9e-09 67.4 239 27.6
SMO357G0017 Selaginella moellendorffii HOM05D004102 ORTHO05D005307 2.5e-09 67.0 111 36.9
FAN15G3235 Fragaria x ananassa HOM05D004102 ORTHO05D005307 8.0e-08 62.0 276 26.1
CAN.G53.6 Capsicum annuum HOM05D004102 ORTHO05D028485 1.4e-07 61.2 67 56.7
Haze_12574 Corylus avellana HOM05D004102 ORTHO05D000687 6.7e-07 58.9 53 64.2
PRCOL_00005438 Prasinoderma coloniale HOM05D004102 ORTHO05D005307 2.0e-06 57.4 269 25.7
C04p37830 Brassica napus HOM05D004102 ORTHO05D005307 2.6e-06 57.0 141 31.2
BolC4t25359H Brassica oleracea HOM05D004102 ORTHO05D005307 2.6e-06 57.0 141 31.2


User provided reference genes

Program Settings