Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 1.7e-161 572.8 326 100.0
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 3.8e-121 438.7 325 78.2
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 5.0e-121 438.3 333 77.8
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 1.5e-120 436.8 325 77.8
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 3.2e-120 435.6 325 78.8
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 4.2e-120 435.3 326 77.0
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 4.7e-119 431.8 327 77.4
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 1.4e-118 430.3 323 78.3
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 2.0e-117 426.4 325 76.3
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 2.0e-117 426.4 326 77.0
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 3.4e-117 425.6 324 76.2
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 9.8e-117 424.1 327 75.2
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.3e-116 423.7 328 75.3
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 1.7e-116 423.3 328 77.1
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 6.3e-116 421.4 324 74.7
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 8.3e-116 421.0 335 73.7
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 4.1e-115 418.7 325 75.1
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 2.7e-114 416.0 331 74.9
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 4.5e-114 415.2 341 73.9
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 5.9e-114 414.8 327 75.2
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 1.3e-113 413.7 327 74.9
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.7e-113 413.3 324 76.5
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 5.0e-113 411.8 327 74.3
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 6.6e-113 411.4 326 74.8
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 8.6e-113 411.0 326 72.4
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.1e-112 410.6 327 74.0
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.1e-112 410.6 326 75.8
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 1.1e-112 410.6 326 74.8
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 3.3e-112 409.1 327 73.4
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 3.3e-112 409.1 325 73.2
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 4.3e-112 408.7 325 74.2
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 5.6e-112 408.3 338 71.3
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 5.6e-112 408.3 325 72.3
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 9.5e-112 407.5 329 72.0
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 9.5e-112 407.5 325 74.5
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 9.5e-112 407.5 330 73.9
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 1.2e-111 407.1 325 74.5
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 1.2e-111 407.1 324 72.8
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 3.6e-111 405.6 329 73.6
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 4.7e-111 405.2 326 73.6
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 6.1e-111 404.8 327 71.3
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 8.0e-111 404.4 325 73.2
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 8.0e-111 404.4 328 74.4
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.4e-110 403.7 330 71.8
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 1.8e-110 403.3 328 72.0
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 3.0e-110 402.5 325 74.2
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 3.0e-110 402.5 325 72.6
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 5.2e-110 401.7 325 72.9
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 5.2e-110 401.7 329 72.6
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 5.2e-110 401.7 326 73.6
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 6.8e-110 401.4 327 74.3
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 2.6e-109 399.4 320 73.8
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 2.6e-109 399.4 328 73.8
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 3.4e-109 399.1 327 72.2
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 3.4e-109 399.1 339 70.2
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 4.4e-109 398.7 326 73.6
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 5.7e-109 398.3 327 73.7
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 7.5e-109 397.9 325 71.4
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 7.5e-109 397.9 323 73.4
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 7.5e-109 397.9 308 73.4
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 1.7e-108 396.7 330 72.4
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 2.2e-108 396.4 287 78.7
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 4.9e-108 395.2 326 72.4
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 1.1e-107 394.0 325 72.6
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 1.1e-107 394.0 324 72.8
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 1.4e-107 393.7 325 73.8
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 2.4e-107 392.9 323 74.3
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 2.4e-107 392.9 325 72.3
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 2.4e-107 392.9 319 74.0
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 2.4e-107 392.9 384 65.9
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 3.2e-107 392.5 327 73.1
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 4.1e-107 392.1 328 70.4
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 5.4e-107 391.7 330 73.0
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 7.0e-107 391.3 336 70.5
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 7.0e-107 391.3 325 72.0
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 1.6e-106 390.2 327 72.8
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 2.0e-106 389.8 325 72.0
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 2.0e-106 389.8 325 72.0
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 2.7e-106 389.4 329 72.9
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 4.6e-106 388.7 325 72.6
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 7.8e-106 387.9 329 70.8
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.0e-105 387.5 326 71.5
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 1.0e-105 387.5 326 71.8
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 1.3e-105 387.1 326 72.1
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 1.3e-105 387.1 259 86.9
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.7e-105 386.7 326 71.5
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 3.0e-105 386.0 328 70.4
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 3.0e-105 386.0 326 69.3
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 3.9e-105 385.6 325 71.4
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 3.9e-105 385.6 325 71.4
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 5.0e-105 385.2 325 71.4
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 5.0e-105 385.2 328 70.4
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 8.6e-105 384.4 325 70.5
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 8.6e-105 384.4 329 70.5
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 1.1e-104 384.0 328 69.5
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 2.5e-104 382.9 358 66.2
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 3.3e-104 382.5 334 70.1
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 4.3e-104 382.1 331 68.9
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 4.3e-104 382.1 325 71.1
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 5.6e-104 381.7 326 71.5
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 5.6e-104 381.7 328 69.2
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 5.6e-104 381.7 330 68.5
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 9.5e-104 380.9 329 70.2
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.6e-103 380.2 325 70.8
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 2.1e-103 379.8 272 80.5
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 2.1e-103 379.8 326 69.6
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 3.6e-103 379.0 326 70.6
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 3.6e-103 379.0 326 70.6
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 4.7e-103 378.6 326 69.6
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 4.7e-103 378.6 326 69.6
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 4.7e-103 378.6 331 70.4
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 1.1e-102 377.5 327 69.7
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.1e-102 377.5 314 71.7
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.8e-102 376.7 309 69.3
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 2.3e-102 376.3 332 70.5
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 4.0e-102 375.6 334 70.1
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 5.2e-102 375.2 320 69.4
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.2e-102 375.2 332 69.9
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 8.9e-102 374.4 320 70.3
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 8.9e-102 374.4 325 70.5
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 1.2e-101 374.0 323 69.7
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 1.2e-101 374.0 310 72.6
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.2e-101 374.0 258 76.0
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 4.4e-101 372.1 324 71.0
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 5.8e-101 371.7 326 70.2
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.8e-101 371.7 333 69.4
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 9.8e-101 370.9 256 84.4
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 1.7e-100 370.2 330 69.4
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 2.4e-99 366.3 323 69.7
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 4.1e-99 365.5 302 73.5
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 9.2e-99 364.4 308 70.1
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 7.8e-98 361.3 322 68.6
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 7.8e-98 361.3 306 71.2
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.0e-97 360.9 319 70.8
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 6.6e-97 358.2 303 72.9
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 8.6e-97 357.8 304 72.4
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 5.6e-96 355.1 325 67.7
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 9.5e-96 354.4 270 75.2
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 7.5e-93 344.7 309 67.0
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.7e-92 343.6 319 64.6
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.5e-90 335.9 228 85.5
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 7.8e-90 334.7 227 86.8
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 6.6e-89 331.6 326 57.4
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 4.7e-87 325.5 228 82.0
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 1.1e-86 324.3 307 67.8
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 2.4e-86 323.2 267 65.5
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 2.2e-84 316.6 263 69.2
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 3.8e-84 315.8 359 58.8
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 1.9e-83 313.5 336 61.9
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 8.7e-81 304.7 328 59.8
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 8.7e-81 304.7 328 59.8
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 4.7e-79 298.9 272 63.6
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 5.2e-78 295.4 251 60.2
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 6.0e-74 282.0 250 56.8
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 2.3e-73 280.0 257 70.4
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.9e-73 279.3 256 60.9
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 3.9e-73 279.3 249 72.7
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 9.0e-70 268.1 193 82.4
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 1.2e-66 257.7 256 67.6
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 5.1e-65 252.3 241 70.1
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 1.3e-55 221.1 270 44.1
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 1.8e-54 217.2 267 47.6
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 3.1e-54 216.5 147 71.4
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 6.9e-54 215.3 122 85.2
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 9.7e-48 194.9 147 68.7
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.4e-45 186.4 122 73.8
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.4e-43 181.0 194 66.5
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.0e-41 173.3 209 59.3
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 5.0e-36 156.0 144 61.8
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 8.2e-31 138.7 98 70.4
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 2.0e-29 134.0 94 71.3
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 4.5e-29 132.9 91 72.5
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.3e-28 131.3 258 37.2
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 4.2e-27 126.3 108 71.3
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 2.8e-23 113.6 88 71.6
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 2.6e-21 107.1 176 49.4
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 2.2e-15 87.4 107 64.5
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 8.2e-15 85.5 83 78.3
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 1.2e-13 81.6 177 45.8
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 1.3e-12 78.2 132 41.7
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 2.3e-09 67.4 91 42.9


User provided reference genes

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