Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 6.4e-282 973.4 483 100.0
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 1.5e-190 669.8 483 69.4
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 7.5e-190 667.5 483 69.2
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 9.8e-190 667.2 483 68.5
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 1.2e-187 660.2 483 67.3
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 3.9e-186 655.2 483 68.3
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 6.6e-186 654.4 486 68.7
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 8.6e-186 654.1 485 66.2
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.6e-184 649.8 483 67.5
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 1.6e-184 649.8 484 67.8
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 2.1e-184 649.4 483 66.3
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 8.1e-184 647.5 483 67.3
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 3.1e-183 645.6 483 66.7
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 4.0e-183 645.2 485 66.0
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 4.0e-183 645.2 478 66.5
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 2.0e-182 642.9 483 66.0
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 5.8e-182 641.3 486 65.6
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.3e-181 640.2 483 65.6
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 2.2e-181 639.4 483 65.8
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 3.2e-180 635.6 493 63.1
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 3.5e-179 632.1 482 65.1
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 3.5e-179 632.1 478 65.1
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 1.3e-178 630.2 487 64.5
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 3.9e-178 628.6 488 64.3
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 5.1e-178 628.2 483 64.8
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 3.3e-177 625.5 480 64.0
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 3.3e-177 625.5 494 66.0
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 7.3e-177 624.4 483 64.4
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 7.3e-177 624.4 486 63.8
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 9.5e-177 624.0 483 63.6
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 1.2e-176 623.6 480 65.0
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 4.7e-176 621.7 488 62.9
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 6.2e-176 621.3 483 63.6
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 6.2e-176 621.3 483 63.6
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 1.4e-175 620.2 485 63.5
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 1.4e-175 620.2 483 63.6
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 1.8e-175 619.8 487 64.1
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 4.0e-175 618.6 484 64.7
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 9.9e-174 614.0 472 64.6
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 9.9e-174 614.0 485 65.6
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 1.7e-173 613.2 484 63.4
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 6.4e-173 611.3 483 62.9
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 8.4e-173 610.9 499 62.5
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 1.9e-172 609.8 494 61.7
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 4.2e-172 608.6 486 61.9
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 2.1e-171 606.3 494 61.3
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 3.5e-171 605.5 486 63.6
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 6.0e-171 604.7 492 60.8
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 7.8e-171 604.4 489 60.9
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.0e-170 604.0 488 63.9
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 3.9e-170 602.1 490 61.8
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 1.1e-169 600.5 480 62.7
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 2.5e-169 599.4 492 60.8
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 3.3e-169 599.0 492 60.0
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 3.3e-169 599.0 480 62.9
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 5.6e-169 598.2 486 63.4
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 7.3e-169 597.8 480 61.7
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 2.1e-168 596.3 494 59.7
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 6.2e-168 594.7 492 59.8
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 6.2e-168 594.7 483 64.0
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 8.1e-168 594.3 485 62.3
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 8.1e-168 594.3 483 61.5
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 4.0e-167 592.0 494 59.5
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 5.2e-167 591.7 494 59.5
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 6.9e-167 591.3 480 61.2
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 6.9e-167 591.3 476 62.8
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 1.5e-166 590.1 492 59.6
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 3.4e-166 589.0 482 61.0
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 4.4e-166 588.6 483 62.7
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 1.3e-165 587.0 483 61.3
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 2.2e-165 586.3 483 62.9
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 6.4e-165 584.7 491 59.7
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 1.1e-164 583.9 486 60.7
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 1.2e-163 580.5 466 61.2
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 1.6e-163 580.1 488 60.2
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 1.3e-162 577.0 482 58.9
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 5.1e-162 575.1 477 60.6
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 3.1e-159 565.8 476 58.8
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 6.0e-155 551.6 483 59.4
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 4.3e-153 545.4 499 56.9
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 3.1e-151 539.3 468 59.6
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.3e-144 517.3 375 66.7
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 1.8e-138 496.9 385 61.8
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.6e-136 490.3 476 50.8
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 8.2e-136 488.0 383 64.2
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 6.9e-135 485.0 320 73.1
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 1.1e-129 467.6 339 66.1
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 1.0e-125 454.5 424 50.9
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 8.8e-122 441.4 469 47.5
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 4.4e-121 439.1 317 65.9
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 7.2e-108 395.2 430 48.6
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.6e-99 367.5 256 71.5
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 7.5e-97 358.6 399 45.1
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 4.1e-95 352.8 264 66.3
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 1.3e-93 347.8 500 39.8
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 2.3e-93 347.1 362 49.4
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 1.6e-91 340.9 443 41.5
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 2.1e-91 340.5 399 42.9
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 8.0e-91 338.6 282 62.1
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 2.3e-90 337.0 277 61.7
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.2e-88 330.5 320 57.2
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 3.5e-86 323.2 300 55.7
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 2.3e-85 320.5 455 40.4
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 1.2e-78 298.1 240 60.8
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 1.3e-72 278.1 211 62.1
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 1.2e-67 261.5 204 64.2
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 5.2e-66 256.1 244 54.5
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 4.3e-60 236.5 237 55.3
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 6.2e-59 232.6 190 57.9
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 9.0e-50 202.2 118 78.0
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 2.9e-48 197.2 118 76.3
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 7.8e-46 189.1 196 53.1
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 5.8e-41 172.9 116 71.6
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 1.1e-28 132.1 108 64.8
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 1.3e-27 128.6 117 56.4
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 1.2e-25 122.1 100 59.0
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 9.7e-12 75.9 197 29.9
MD06G1154400 Malus domestica HOM05D006543 ORTHO05D008308 3.7e-11 73.9 200 29.5
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 1.2e-09 68.9 44 70.5
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 1.6e-06 58.5 58 58.6
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 1.6e-06 58.5 58 58.6
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 2.1e-06 58.2 33 75.8


User provided reference genes

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