Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02393 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 4.9e-196 687.6 340 100.0
TAR628G0457 Trochodendron aralioides HOM05D006408 ORTHO05D008038 2.0e-141 506.1 341 76.8
CANSAT25G1301 Cannabis sativa HOM05D006408 ORTHO05D008038 6.8e-137 491.1 341 73.9
PSO017G3385 Papaver somniferum HOM05D006408 ORTHO05D008038 2.0e-136 489.6 283 85.2
MELO3C010512.2 Cucumis melo HOM05D006408 ORTHO05D008038 4.9e-135 485.0 290 79.3
CsaV3_4G028270 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.9e-134 483.0 290 79.0
MBI03_g48069_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 3.2e-134 482.3 336 74.4
ClCG11G015980 Citrullus lanatus HOM05D006408 ORTHO05D008038 4.1e-134 481.9 312 75.0
PSO170G2303 Papaver somniferum HOM05D006408 ORTHO05D008038 4.1e-134 481.9 342 74.6
Cfa018129 Carpinus fangiana HOM05D006408 ORTHO05D008038 1.2e-133 480.3 330 73.6
Nn1g08961 Nelumbo nucifera HOM05D006408 ORTHO05D008038 2.3e-132 476.1 348 72.1
CiPaw.16G022700 Carya illinoinensis HOM05D006408 ORTHO05D008038 3.9e-132 475.3 340 72.9
Prupe.1G489500 Prunus persica HOM05D006408 ORTHO05D008038 3.9e-132 475.3 343 72.3
Sp1g19130 Schrenkiella parvula HOM05D006408 ORTHO05D008038 6.6e-132 474.6 334 74.6
Thecc.08G133100 Theobroma cacao HOM05D006408 ORTHO05D008038 1.5e-131 473.4 338 74.3
PGR083G0137 Punica granatum HOM05D006408 ORTHO05D008038 7.3e-131 471.1 288 80.9
Sopen04g025710 Solanum pennellii HOM05D006408 ORTHO05D008038 9.5e-131 470.7 337 70.9
AL1G34740 Arabidopsis lyrata HOM05D006408 ORTHO05D008038 2.8e-130 469.2 332 72.9
CARHR021960 Cardamine hirsuta HOM05D006408 ORTHO05D008038 3.6e-130 468.8 332 72.9
Solyc04g057870.3 Solanum lycopersicum HOM05D006408 ORTHO05D008038 4.7e-130 468.4 337 70.6
THA.LOC104814021 Tarenaya hassleriana HOM05D006408 ORTHO05D008038 4.7e-130 468.4 280 81.8
Gorai.005G087700 Gossypium raimondii HOM05D006408 ORTHO05D008038 8.0e-130 467.6 339 72.0
MD08G1159400 Malus domestica HOM05D006408 ORTHO05D008038 8.0e-130 467.6 340 71.2
Cpa.g.sc26.317 Carica papaya HOM05D006408 ORTHO05D008038 1.1e-129 467.2 319 73.4
CDE06G0572 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 2.3e-129 466.1 286 79.7
A06p17690 Brassica napus HOM05D006408 ORTHO05D008038 5.2e-129 464.9 335 72.8
BraA06t24861Z Brassica rapa HOM05D006408 ORTHO05D008038 5.2e-129 464.9 335 72.8
CAN.G288.5 Capsicum annuum HOM05D006408 ORTHO05D008038 5.2e-129 464.9 296 77.7
Manes.02G168400 Manihot esculenta HOM05D006408 ORTHO05D008038 5.2e-129 464.9 335 71.0
C05p20590 Brassica napus HOM05D006408 ORTHO05D008038 1.2e-128 463.8 337 71.8
BolC5t30757H Brassica oleracea HOM05D006408 ORTHO05D008038 1.2e-128 463.8 337 71.8
Aa31LG7G5580 Aethionema arabicum HOM05D006408 ORTHO05D008038 2.0e-128 463.0 353 68.8
RcHm_v2.0_Chr6g0296711 Rosa chinensis HOM05D006408 ORTHO05D008038 2.6e-128 462.6 340 69.1
Potri.002G078900 Populus trichocarpa HOM05D006408 ORTHO05D008038 1.3e-127 460.3 343 70.0
ATR0568G086 Amborella trichopoda HOM05D006408 ORTHO05D008038 8.3e-127 457.6 322 71.4
Glyma.04G087000 Glycine max HOM05D006408 ORTHO05D008038 1.4e-126 456.8 329 68.1
EL10Ac1g01346 Beta vulgaris HOM05D006408 ORTHO05D008038 3.2e-126 455.7 329 71.1
Nitab4.5_0001168g0170 Nicotiana tabacum HOM05D006408 ORTHO05D008038 3.2e-126 455.7 337 69.1
Atru.chr13.1568 Acer truncatum HOM05D006408 ORTHO05D008038 5.4e-126 454.9 343 68.5
Peaxi162Scf00066g00222 Petunia axillaris HOM05D006408 ORTHO05D008038 9.2e-126 454.1 337 70.3
FAN20G2488 Fragaria x ananassa HOM05D006408 ORTHO05D008038 3.5e-125 452.2 340 70.3
PGSC0003DMG400028061 Solanum tuberosum HOM05D006408 ORTHO05D008038 1.1e-123 447.2 337 69.1
Ca_16607_v3 Cicer arietinum L. HOM05D006408 ORTHO05D008038 5.6e-123 444.9 285 76.5
FAN24G2159 Fragaria x ananassa HOM05D006408 ORTHO05D008038 5.6e-123 444.9 340 69.4
Glyma.06G117500 Glycine max HOM05D006408 ORTHO05D008038 1.2e-122 443.7 336 67.3
Sed0021255 Sechium edule HOM05D006408 ORTHO05D008038 1.6e-122 443.4 332 66.9
CDE04G0676 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 3.6e-122 442.2 274 78.8
VMungo1309G0712 Vigna mungo HOM05D006408 ORTHO05D008038 3.6e-122 442.2 287 74.2
AT1G21600 Arabidopsis thaliana HOM05D006408 ORTHO05D008038 4.7e-122 441.8 332 69.6
Lalb_Chr08g0241101 Lupinus albus HOM05D006408 ORTHO05D008038 6.2e-122 441.4 334 67.1
Hma1.2p1_1121F.1_g259280 Hydrangea macrophylla HOM05D006408 ORTHO05D008038 8.1e-122 441.0 344 69.5
Medtr3g088605 Medicago truncatula HOM05D006408 ORTHO05D008038 1.1e-121 440.7 338 66.6
arahy.Tifrunner.gnm1.ann1.227FW7 Arachis hypogaea HOM05D006408 ORTHO05D008038 1.8e-121 439.9 339 69.3
FAN27G1901 Fragaria x ananassa HOM05D006408 ORTHO05D008038 1.8e-121 439.9 340 68.2
Eucgr.A00239 Eucalyptus grandis HOM05D006408 ORTHO05D008038 8.9e-121 437.6 287 77.0
Phvul.009G129900 Phaseolus vulgaris HOM05D006408 ORTHO05D008038 8.9e-121 437.6 332 66.6
arahy.Tifrunner.gnm1.ann1.8X384Y Arachis hypogaea HOM05D006408 ORTHO05D008038 1.2e-120 437.2 337 68.8
Psat5g084760 Pisum sativum HOM05D006408 ORTHO05D008038 2.0e-120 436.4 285 75.4
CSS0036755 Camellia sinensis var. sinensis HOM05D006408 ORTHO05D008038 2.9e-119 432.6 346 68.2
Actinidia15213 Actinidia chinensis HOM05D006408 ORTHO05D008038 3.7e-119 432.2 285 77.5
unitig_52.g17545 Utricularia gibba HOM05D006408 ORTHO05D008038 4.9e-119 431.8 287 72.8
BcaC05g26077 Brassica carinata HOM05D006408 ORTHO05D008038 1.4e-118 430.3 337 68.2
DCAR_003587 Daucus carota HOM05D006408 ORTHO05D008038 1.4e-118 430.3 263 78.7
Cc10_g13760 Coffea canephora HOM05D006408 ORTHO05D008038 1.9e-118 429.9 337 66.2
FAN15G0171 Fragaria x ananassa HOM05D006408 ORTHO05D008038 1.2e-117 427.2 254 80.3
TPR.G28811 Trifolium pratense HOM05D006408 ORTHO05D008038 1.0e-116 424.1 343 65.3
MSTRG.22398 Avicennia marina HOM05D006408 ORTHO05D008038 2.3e-116 422.9 319 69.0
Gohir.D02G078200 Gossypium hirsutum HOM05D006408 ORTHO05D008038 6.6e-116 421.4 339 67.0
Oeu047179.2 Olea europaea HOM05D006408 ORTHO05D008038 6.6e-116 421.4 287 72.5
Carub.0001s2103 Capsella rubella HOM05D006408 ORTHO05D008038 8.6e-116 421.0 225 88.9
GSVIVG01008807001 Vitis vinifera HOM05D006408 ORTHO05D008038 1.9e-115 419.9 222 88.7
HanXRQChr02g0045521 Helianthus annuus HOM05D006408 ORTHO05D008038 2.5e-115 419.5 300 70.7
Lj4A682G50 Lonicera japonica HOM05D006408 ORTHO05D008038 3.3e-115 419.1 250 80.8
Ciclev10001886m.g Citrus clementina HOM05D006408 ORTHO05D008038 4.3e-115 418.7 340 67.9
Lj1g0002290 Lotus japonicus HOM05D006408 ORTHO05D008038 4.7e-114 415.2 338 66.0
BcaB07g32155 Brassica carinata HOM05D006408 ORTHO05D008038 1.1e-113 414.1 337 66.8
HPP92_009911 Vanilla planifolia HOM05D006408 ORTHO05D008038 4.0e-113 412.1 272 73.9
Migut.N03260 Erythranthe guttata HOM05D006408 ORTHO05D008038 2.0e-112 409.8 227 84.1
QL09p032485 Quercus lobata HOM05D006408 ORTHO05D008038 1.7e-111 406.8 223 86.1
ECA236G3303 Erigeron canadensis HOM05D006408 ORTHO05D008038 1.6e-109 400.2 352 61.1
FvH4_2g27850 Fragaria vesca HOM05D006408 ORTHO05D008038 2.1e-109 399.8 340 63.8
Lsat_1_v5_gn_1_7780 Lactuca sativa HOM05D006408 ORTHO05D008038 3.9e-108 395.6 347 63.4
Ah.10g032560 Amaranthus hybridus HOM05D006408 ORTHO05D008038 9.6e-107 391.0 331 62.5
BolC8t49731H Brassica oleracea HOM05D006408 ORTHO05D008038 5.8e-104 381.7 345 61.7
A08p28910 Brassica napus HOM05D006408 ORTHO05D008038 2.9e-103 379.4 206 88.8
Hund17341 Selenicereus undatus HOM05D006408 ORTHO05D008038 3.5e-101 372.5 308 64.9
Gohir.A02G071000 Gossypium hirsutum HOM05D006408 ORTHO05D008038 5.3e-97 358.6 283 66.1
SGA_v2.0_scaffold25G11139 Striga asiatica HOM05D006408 ORTHO05D008038 1.5e-96 357.1 373 53.1
Thhalv10007813m.g Eutrema salsugineum HOM05D006408 ORTHO05D008038 7.6e-96 354.8 214 81.3
Os11g0110100 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 7.1e-94 348.2 232 71.6
Zm00001eb195160 Zea mays HOM05D006408 ORTHO05D008038 7.1e-94 348.2 258 65.5
Os12g0110400 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 9.3e-94 347.8 227 72.2
Nitab4.5_0003978g0010 Nicotiana tabacum HOM05D006408 ORTHO05D008038 5.1e-92 342.0 269 66.2
AUR62007717 Chenopodium quinoa HOM05D006408 ORTHO05D008038 1.1e-91 340.9 335 57.3
AUR62013426 Chenopodium quinoa HOM05D006408 ORTHO05D008038 1.1e-91 340.9 329 57.4
Rhsim06G0091400 Rhododendron simsii HOM05D006408 ORTHO05D008038 1.1e-89 334.3 497 43.7
Sc26g0002930 Simmondsia chinensis HOM05D006408 ORTHO05D008038 1.7e-87 327.0 267 65.9
C08p20930 Brassica napus HOM05D006408 ORTHO05D008038 6.2e-82 308.5 265 63.4
SEGI_15088 Sequoiadendron giganteum HOM05D006408 ORTHO05D008038 1.6e-77 293.9 332 47.6
Mapoly0008s0219 Marchantia polymorpha HOM05D006408 ORTHO05D008038 5.1e-76 288.9 286 50.7
vmacro20822 Vaccinium macrocarpon HOM05D006408 ORTHO05D008038 5.1e-76 288.9 167 82.6
Duzib093G1884 Durio zibethinus HOM05D006408 ORTHO05D008038 8.2e-74 281.6 224 65.2
Pp3c1_1000 Physcomitrium patens HOM05D006408 ORTHO05D008038 1.9e-70 270.4 287 48.4
BraA08t34821Z Brassica rapa HOM05D006408 ORTHO05D008038 4.3e-67 259.2 259 56.4
COL.COLO4_06961 Corchorus olitorius HOM05D006408 ORTHO05D008038 1.1e-65 254.6 235 61.7
CsaV3_5G019980 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.1e-62 244.6 220 56.4
SMO146G0302 Selaginella moellendorffii HOM05D006408 ORTHO05D008038 6.1e-61 238.8 208 55.3
Dinv14691 Davidia involucrata HOM05D006408 ORTHO05D008038 3.9e-60 236.1 196 66.3
CsaV3_UNG224650 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.5e-59 234.2 213 56.3
MBI03_g28486_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 5.7e-59 232.3 251 55.4
SalBow2G2951 Salvia bowleyana HOM05D006408 ORTHO05D008038 1.7e-58 230.7 232 56.5
MBI03_g39652_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 9.1e-49 198.4 171 63.2
Aqoxy219s001 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 1.4e-44 184.5 109 85.3
Sabra02G0061800 Salix brachista HOM05D006408 ORTHO05D008038 1.8e-41 174.1 96 84.4
CBR_g40143 Chara braunii HOM05D006408 ORTHO05D008038 5.9e-32 142.5 175 40.0
CsaV3_5G018920 Cucumis sativus L. HOM05D006408 ORTHO05D008038 7.2e-30 135.6 155 47.1
BolC5t30909H Brassica oleracea HOM05D006408 ORTHO05D008038 8.9e-28 128.6 62 95.2
AagrBONN_evm.TU.Sc2ySwM_344.4901 Anthoceros agrestis HOM05D006408 ORTHO05D008038 1.9e-22 110.9 144 45.1
Actinidia21278 Actinidia chinensis HOM05D006408 ORTHO05D008038 2.1e-21 107.5 104 57.7
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.1e-13 80.9 75 61.3
Actinidia21279 Actinidia chinensis HOM05D006408 ORTHO05D008038 8.3e-10 68.9 175 36.0
CsaV3_UNG111870 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.4e-09 68.2 68 52.9
CsaV3_UNG115880 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.4e-09 68.2 68 52.9


User provided reference genes

Program Settings