Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 1.1e-308 1062.8 635 100.0
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 2.3e-146 523.5 585 52.8
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 8.8e-146 521.5 530 58.1
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 1.3e-144 517.7 602 53.8
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 2.2e-144 516.9 505 61.0
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 5.0e-141 505.8 529 57.8
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 8.0e-139 498.4 397 66.5
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 4.4e-137 492.7 529 52.4
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 4.4e-137 492.7 515 55.5
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 5.7e-137 492.3 584 48.8
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 1.7e-136 490.7 528 55.7
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 1.7e-136 490.7 527 52.8
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 4.8e-136 489.2 528 56.6
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 2.4e-135 486.9 528 56.4
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 8.5e-133 478.4 531 55.0
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 9.4e-132 474.9 522 55.0
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 1.2e-131 474.6 593 50.4
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 4.7e-131 472.6 483 54.0
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 8.8e-130 468.4 508 52.0
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 2.6e-129 466.8 574 50.2
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 4.4e-129 466.1 494 52.2
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 5.7e-129 465.7 308 74.7
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 5.7e-129 465.7 580 49.7
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 2.8e-128 463.4 508 55.7
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 2.8e-128 463.4 584 46.4
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 2.8e-128 463.4 673 45.3
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 1.1e-127 461.5 580 50.5
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 1.4e-127 461.1 533 52.3
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 1.8e-127 460.7 331 71.3
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 1.8e-127 460.7 580 50.3
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 2.4e-127 460.3 508 51.0
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 4.5e-126 456.1 577 52.7
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 4.5e-126 456.1 521 53.7
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 7.7e-126 455.3 308 71.1
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 1.3e-125 454.5 609 49.4
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 1.7e-125 454.1 542 48.2
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 2.2e-125 453.8 307 71.0
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 5.0e-125 452.6 304 71.4
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 5.0e-125 452.6 308 71.8
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 1.5e-124 451.1 327 67.0
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 1.9e-124 450.7 309 70.6
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 1.9e-124 450.7 307 70.0
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 4.7e-123 446.0 500 55.0
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 8.0e-123 445.3 304 70.4
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 1.4e-122 444.5 528 48.7
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 3.0e-122 443.4 607 47.8
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 8.8e-122 441.8 495 53.3
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 8.8e-122 441.8 601 47.1
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 1.2e-121 441.4 601 49.6
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 2.0e-121 440.7 303 70.0
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 7.5e-121 438.7 306 69.6
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 9.8e-121 438.3 492 53.7
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 1.3e-120 438.0 323 66.6
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 1.7e-120 437.6 334 66.8
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 1.7e-120 437.6 380 62.4
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 4.1e-119 433.0 547 50.5
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 5.4e-119 432.6 521 53.7
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 7.0e-119 432.2 493 50.9
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.0e-118 430.6 388 59.0
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 2.7e-118 430.3 588 49.3
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 3.5e-118 429.9 536 50.6
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 8.6e-117 425.2 468 51.5
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 1.2e-115 421.4 572 48.8
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 2.1e-115 420.6 369 59.6
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 6.1e-115 419.1 551 48.5
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 1.3e-112 411.4 499 48.3
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 1.4e-111 407.9 663 42.8
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 7.0e-111 405.6 307 65.1
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 7.0e-111 405.6 596 45.3
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 4.5e-110 402.9 504 47.6
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 5.9e-110 402.5 303 65.7
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 1.0e-109 401.7 576 47.2
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 5.0e-109 399.4 311 62.7
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 2.5e-108 397.1 303 64.4
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 2.5e-108 397.1 303 64.4
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 2.5e-108 397.1 326 59.5
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 4.3e-108 396.4 303 65.0
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 7.3e-108 395.6 303 64.0
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 3.6e-107 393.3 303 64.4
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 4.7e-107 392.9 303 63.7
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 6.1e-107 392.5 303 63.7
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 8.0e-107 392.1 303 63.0
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 1.0e-106 391.7 303 64.4
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 1.4e-106 391.3 573 46.2
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 2.3e-106 390.6 515 46.2
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 3.0e-106 390.2 276 67.0
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 5.8e-105 386.0 331 61.6
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 9.8e-105 385.2 324 58.6
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.1e-99 367.5 306 58.5
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 2.1e-99 367.5 296 60.1
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 1.5e-97 361.3 472 44.5
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 4.4e-97 359.8 652 40.8
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 5.8e-97 359.4 322 56.8
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 5.4e-95 352.8 300 55.7
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 5.4e-95 352.8 480 44.8
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 1.1e-92 345.1 606 41.9
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 4.3e-92 343.2 298 57.0
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 5.6e-92 342.8 300 54.7
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 5.6e-92 342.8 327 52.6
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 5.6e-92 342.8 333 54.1
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 1.2e-91 341.7 370 50.0
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 1.2e-91 341.7 370 50.0
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 6.2e-91 339.3 369 51.8
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 6.4e-88 329.3 298 55.4
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 1.2e-86 325.1 276 60.5
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 3.1e-82 310.5 288 56.9
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 2.2e-80 304.3 309 52.8
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 1.2e-78 298.5 331 47.7
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 3.0e-77 293.9 435 41.6
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 1.2e-75 288.5 330 45.5
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 1.1e-68 265.4 345 39.7
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 6.9e-66 256.1 218 61.5
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.0e-65 254.6 513 35.7
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 1.9e-63 248.1 181 64.1
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 3.5e-62 243.8 188 62.8
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 1.3e-61 241.9 418 42.8
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 2.4e-58 231.1 146 74.7
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 9.9e-57 225.7 267 46.8
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 5.3e-50 203.4 381 34.6
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 1.6e-46 191.8 126 74.6
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 1.8e-37 161.8 293 37.2
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 5.5e-31 140.2 100 67.0
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 7.4e-28 129.8 244 37.7
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 9.4e-23 112.8 73 74.0
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 2.7e-22 111.3 185 36.8
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 4.7e-22 110.5 85 63.5
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 4.2e-15 87.4 69 59.4
Oeu017817.1 Olea europaea HOM05D001353 ORTHO05D002359 5.2e-13 80.5 58 58.6
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 5.2e-13 80.5 62 59.7
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 5.7e-12 77.0 54 68.5


User provided reference genes

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