Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 6.2e-109 397.5 205 100.0
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 6.0e-88 327.8 205 80.0
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 2.2e-82 309.3 196 79.1
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 2.2e-82 309.3 207 79.7
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 8.4e-82 307.4 197 78.2
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 8.4e-82 307.4 192 78.1
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 8.4e-82 307.4 201 77.6
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 1.9e-81 306.2 197 77.7
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 3.2e-81 305.4 197 77.2
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 3.2e-81 305.4 196 78.1
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 4.2e-81 305.1 203 75.4
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 5.4e-81 304.7 200 77.5
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 5.4e-81 304.7 200 77.5
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 9.3e-81 303.9 195 77.4
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 2.7e-80 302.4 205 73.7
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 3.5e-80 302.0 193 76.2
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 4.6e-80 301.6 205 73.7
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 7.9e-80 300.8 197 76.6
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 7.9e-80 300.8 191 77.5
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 1.0e-79 300.4 209 74.6
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 1.3e-79 300.1 189 76.7
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 3.0e-79 298.9 201 72.6
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 3.0e-79 298.9 207 78.3
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 8.7e-79 297.4 194 75.3
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 8.7e-79 297.4 197 75.6
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 1.1e-78 297.0 196 76.0
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 2.5e-78 295.8 199 75.4
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 5.6e-78 294.7 192 77.6
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.3e-77 293.5 192 77.1
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 1.3e-77 293.5 190 74.2
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 1.3e-77 293.5 205 73.7
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 1.6e-77 293.1 192 77.1
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 2.1e-77 292.7 196 74.5
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 2.1e-77 292.7 190 74.2
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 2.8e-77 292.4 197 75.1
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 3.6e-77 292.0 193 75.6
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 6.2e-77 291.2 193 75.1
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 8.1e-77 290.8 190 75.3
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 8.1e-77 290.8 196 74.5
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 1.8e-76 289.7 200 73.0
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 4.0e-76 288.5 197 74.6
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 4.0e-76 288.5 194 74.7
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 9.0e-76 287.3 186 73.7
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 9.0e-76 287.3 186 73.7
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.0e-75 286.2 186 73.1
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 3.4e-75 285.4 202 71.8
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 7.6e-75 284.3 201 72.1
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 9.9e-75 283.9 190 74.2
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 9.9e-75 283.9 190 74.7
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 1.3e-74 283.5 196 71.9
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 1.3e-74 283.5 197 71.6
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 2.2e-74 282.7 186 75.8
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 2.2e-74 282.7 202 71.3
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 2.9e-74 282.3 194 71.6
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 2.9e-74 282.3 197 74.6
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 2.9e-74 282.3 202 70.8
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 3.8e-74 282.0 197 72.6
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 3.8e-74 282.0 194 71.6
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 8.4e-74 280.8 197 74.1
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 1.1e-73 280.4 187 73.3
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 2.4e-73 279.3 248 60.5
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 5.5e-73 278.1 194 74.2
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 1.2e-72 276.9 219 68.0
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.2e-72 276.9 194 71.6
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 1.2e-72 276.9 186 73.1
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 1.6e-72 276.6 189 73.5
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 1.6e-72 276.6 257 58.4
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 3.5e-72 275.4 188 71.8
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 4.6e-72 275.0 183 74.9
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 7.9e-72 274.2 188 71.3
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 7.9e-72 274.2 188 71.3
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 7.9e-72 274.2 187 71.7
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 1.3e-71 273.5 192 72.9
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 1.3e-71 273.5 187 71.7
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.8e-71 273.1 176 76.7
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.3e-71 272.7 202 71.8
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 5.1e-71 271.6 187 71.1
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 8.7e-71 270.8 190 69.5
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.9e-70 269.6 205 70.2
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 9.6e-70 267.3 190 68.9
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 1.3e-69 266.9 188 69.1
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 2.1e-69 266.2 188 69.7
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 8.1e-69 264.2 190 68.9
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 2.4e-68 262.7 187 72.7
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 3.1e-68 262.3 190 67.4
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 1.2e-67 260.4 213 66.7
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 2.6e-67 259.2 185 69.7
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 2.3e-63 246.1 161 76.4
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 1.5e-62 243.4 164 72.0
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 6.9e-60 234.6 188 63.8
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 2.6e-59 232.6 185 62.2
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 3.2e-57 225.7 185 61.1
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 7.2e-57 224.6 147 74.8
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 3.9e-55 218.8 195 61.0
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 5.1e-55 218.4 167 67.7
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.9e-54 216.5 194 59.3
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 4.3e-54 215.3 145 73.1
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.6e-53 213.4 186 59.7
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 1.4e-49 200.3 252 50.4
SEGI_30710 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 1.5e-46 190.3 113 82.3
DCAR_005521 Daucus carota HOM05D000780 ORTHO05D008187 2.6e-46 189.5 109 86.2
ATR0724G057 Amborella trichopoda HOM05D000780 ORTHO05D008187 7.4e-46 188.0 109 85.3
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 9.7e-46 187.6 137 67.9
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 2.2e-45 186.4 141 68.8
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 2.8e-45 186.0 123 77.2
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 2.4e-44 183.0 137 67.2
Cre07.g312750 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D008187 4.4e-38 162.2 187 48.1
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 1.3e-37 160.6 112 69.6
QL01p042037 Quercus lobata HOM05D000780 ORTHO05D008187 9.1e-36 154.5 86 87.2
MCO11G401 Micromonas commoda HOM05D000780 ORTHO05D008187 3.5e-35 152.5 199 44.2
Thecc.07G153800 Theobroma cacao HOM05D000780 ORTHO05D008187 2.5e-33 146.4 102 70.6
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 1.0e-31 141.0 111 65.8
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 1.5e-30 137.1 136 54.4
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 2.6e-30 136.3 140 48.6
MD04G1233000 Malus domestica HOM05D000780 ORTHO05D008187 2.7e-27 126.3 140 56.4
PRCOL_00002874 Prasinoderma coloniale HOM05D000780 ORTHO05D008187 1.5e-22 110.5 132 48.5
Cfa025943 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.3e-21 107.5 197 34.0
Dinv06000 Davidia involucrata HOM05D000780 ORTHO05D008187 3.1e-20 102.8 59 84.7
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.3e-15 86.7 82 50.0
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.8e-12 77.0 82 46.3
Cpa.g.c42374 Carica papaya HOM05D000780 ORTHO05D008187 5.9e-11 72.0 49 65.3
Psat7g095160 Pisum sativum HOM05D000780 ORTHO05D008187 2.3e-10 70.1 56 58.9
SalBow1G1556 Salvia bowleyana HOM05D000111 ORTHO05D013786 6.6e-10 68.6 109 40.4
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 5.7e-06 55.5 55 49.1


User provided reference genes

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