Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02471 Aquilegia oxysepala HOM05D002037 ORTHO05D005261 0.0e+00 1712.2 856 100.0
Aqoxy6G00128 Aquilegia oxysepala HOM05D002037 ORTHO05D005261 1.4e-130 471.5 1243 30.3
TAR628G0359 Trochodendron aralioides HOM05D002037 ORTHO05D005261 9.4e-127 458.8 1249 30.0
CSS0033264 Camellia sinensis var. sinensis HOM05D002037 ORTHO05D005261 1.4e-125 454.9 1251 29.3
QL12p030895 Quercus lobata HOM05D002037 ORTHO05D005261 2.2e-123 447.6 1256 29.1
Lsat_1_v5_gn_5_59360 Lactuca sativa HOM05D002037 ORTHO05D005261 1.1e-122 445.3 1163 30.2
CiPaw.08G017100 Carya illinoinensis HOM05D002037 ORTHO05D005261 1.8e-122 444.5 1273 28.8
Ciclev10007230m.g Citrus clementina HOM05D002037 ORTHO05D005261 3.1e-122 443.7 1253 29.1
ECA240G1370 Erigeron canadensis HOM05D002037 ORTHO05D005261 3.1e-122 443.7 1222 28.8
HanXRQChr03g0082961 Helianthus annuus HOM05D002037 ORTHO05D005261 5.3e-122 443.0 1188 29.9
TWI32G0793 Tripterygium wilfordii HOM05D002037 ORTHO05D005261 3.5e-121 440.3 1266 29.0
MD15G1113300 Malus domestica HOM05D002037 ORTHO05D005261 5.9e-121 439.5 1244 29.0
Lj5g0025434 Lotus japonicus HOM05D002037 ORTHO05D005261 7.7e-121 439.1 1260 28.9
SGA_v2.0_scaffold27G11691 Striga asiatica HOM05D002037 ORTHO05D005261 2.9e-120 437.2 1226 29.4
TWI63G1280 Tripterygium wilfordii HOM05D002037 ORTHO05D005261 2.9e-120 437.2 1266 29.1
Cfa013233 Carpinus fangiana HOM05D002037 ORTHO05D005261 3.8e-120 436.8 1272 29.2
PSO063G0181 Papaver somniferum HOM05D002037 ORTHO05D005261 3.8e-120 436.8 1213 29.6
Glyma.06G075000 Glycine max HOM05D002037 ORTHO05D005261 1.1e-119 435.3 1253 28.7
Migut.A00462 Erythranthe guttata HOM05D002037 ORTHO05D005261 1.5e-119 434.9 1199 29.4
Actinidia03327 Actinidia chinensis HOM05D002037 ORTHO05D005261 1.9e-119 434.5 1246 29.0
PGR044G2064 Punica granatum HOM05D002037 ORTHO05D005261 1.9e-119 434.5 1214 29.4
PSO017G1653 Papaver somniferum HOM05D002037 ORTHO05D005261 3.2e-119 433.7 1228 29.4
Thecc.09G001100 Theobroma cacao HOM05D002037 ORTHO05D005261 5.5e-119 433.0 1247 28.8
Haze_21662 Corylus avellana HOM05D002037 ORTHO05D005261 9.4e-119 432.2 1275 29.0
Potri.006G280200 Populus trichocarpa HOM05D002037 ORTHO05D005261 9.4e-119 432.2 1223 28.6
CiPaw.07G216200 Carya illinoinensis HOM05D002037 ORTHO05D005261 1.2e-118 431.8 1273 28.6
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 1.2e-118 431.8 1223 28.9
Gohir.D08G274900 Gossypium hirsutum HOM05D002037 ORTHO05D005261 1.6e-118 431.4 1226 29.1
Lj7A751T36 Lonicera japonica HOM05D002037 ORTHO05D005261 2.1e-118 431.0 1224 28.9
Gorai.004G293400 Gossypium raimondii HOM05D002037 ORTHO05D005261 2.7e-118 430.6 1237 28.9
arahy.Tifrunner.gnm1.ann1.8Q3S3N Arachis hypogaea HOM05D002037 ORTHO05D005261 4.7e-118 429.9 1251 28.7
arahy.Tifrunner.gnm1.ann1.WQ4U6A Arachis hypogaea HOM05D002037 ORTHO05D005261 4.7e-118 429.9 1251 28.7
Prupe.1G463700 Prunus persica HOM05D002037 ORTHO05D005261 4.7e-118 429.9 1253 28.7
Manes.16G138600 Manihot esculenta HOM05D002037 ORTHO05D005261 6.1e-118 429.5 1226 29.1
Sc09g0007440 Simmondsia chinensis HOM05D002037 ORTHO05D005261 1.4e-117 428.3 1223 29.4
Gohir.A08G253200 Gossypium hirsutum HOM05D002037 ORTHO05D005261 2.3e-117 427.6 1237 28.9
THA.LOC104803889 Tarenaya hassleriana HOM05D002037 ORTHO05D005261 2.3e-117 427.6 1171 29.4
Duzib168G1462 Durio zibethinus HOM05D002037 ORTHO05D005261 3.0e-117 427.2 1244 28.8
SGA_v2.0_scaffold193G40648 Striga asiatica HOM05D002037 ORTHO05D005261 4.0e-117 426.8 1231 28.3
Hund19377 Selenicereus undatus HOM05D002037 ORTHO05D005261 5.2e-117 426.4 1235 29.4
vmacro05091 Vaccinium macrocarpon HOM05D002037 ORTHO05D005261 5.2e-117 426.4 1216 28.5
CDE08G1677 Ceratophyllum demersum HOM05D002037 ORTHO05D005261 8.8e-117 425.6 1220 28.9
PGR044G2421 Punica granatum HOM05D002037 ORTHO05D005261 2.0e-116 424.5 1218 29.2
FvH4_2g30560 Fragaria vesca HOM05D002037 ORTHO05D005261 2.6e-116 424.1 1239 28.2
MSTRG.25765 Avicennia marina HOM05D002037 ORTHO05D005261 3.4e-116 423.7 1235 28.3
CDE02G1944 Ceratophyllum demersum HOM05D002037 ORTHO05D005261 3.4e-116 423.7 1225 29.1
Glyma.04G073900 Glycine max HOM05D002037 ORTHO05D005261 3.4e-116 423.7 1253 28.4
FAN20G1121 Fragaria x ananassa HOM05D002037 ORTHO05D005261 4.4e-116 423.3 1224 28.6
TPR.G12447 Trifolium pratense HOM05D002037 ORTHO05D005261 5.7e-116 422.9 1242 28.7
FAN24G1054 Fragaria x ananassa HOM05D002037 ORTHO05D005261 7.5e-116 422.5 1239 28.1
Phvul.009G099700 Phaseolus vulgaris HOM05D002037 ORTHO05D005261 2.8e-115 420.6 1255 28.3
Lalb_Chr11g0064041 Lupinus albus HOM05D002037 ORTHO05D005261 3.7e-115 420.2 1224 28.3
AL7G20910 Arabidopsis lyrata HOM05D002037 ORTHO05D005261 4.8e-115 419.9 1237 28.2
Medtr3g108470 Medicago truncatula HOM05D002037 ORTHO05D005261 4.8e-115 419.9 1245 28.4
FAN27G2203 Fragaria x ananassa HOM05D002037 ORTHO05D005261 6.3e-115 419.5 1243 28.1
CANSAT25G0165 Cannabis sativa HOM05D002037 ORTHO05D005261 1.1e-114 418.7 1251 28.4
Solyc08g074370.4 Solanum lycopersicum HOM05D002037 ORTHO05D005261 1.1e-114 418.7 1244 28.3
Sopen08g023030 Solanum pennellii HOM05D002037 ORTHO05D005261 1.4e-114 418.3 1244 28.3
DCAR_030972 Daucus carota HOM05D002037 ORTHO05D005261 1.8e-114 417.9 1254 27.9
A03p60560 Brassica napus HOM05D002037 ORTHO05D005261 4.1e-114 416.8 1238 28.3
C07p58470 Brassica napus HOM05D002037 ORTHO05D005261 4.1e-114 416.8 1243 28.2
BraA03t15097Z Brassica rapa HOM05D002037 ORTHO05D005261 4.1e-114 416.8 1238 28.3
CAN.G195.8 Capsicum annuum HOM05D002037 ORTHO05D005261 5.4e-114 416.4 1249 28.1
Sed0009824 Sechium edule HOM05D002037 ORTHO05D005261 1.2e-113 415.2 1203 28.4
AT4G31160 Arabidopsis thaliana HOM05D002037 ORTHO05D005261 1.6e-113 414.8 1261 27.6
Cpa.g.sc148.12 Carica papaya HOM05D002037 ORTHO05D005261 1.6e-113 414.8 1268 28.0
THA.LOC104803581 Tarenaya hassleriana HOM05D002037 ORTHO05D005261 1.6e-113 414.8 1240 28.6
ATR0584G173 Amborella trichopoda HOM05D002037 ORTHO05D005261 2.7e-113 414.1 1211 28.7
Eucgr.C00279 Eucalyptus grandis HOM05D002037 ORTHO05D005261 3.5e-113 413.7 1208 29.2
BolC7t46302H Brassica oleracea HOM05D002037 ORTHO05D005261 4.5e-113 413.3 1243 27.9
RcHm_v2.0_Chr6g0312521 Rosa chinensis HOM05D002037 ORTHO05D005261 4.5e-113 413.3 1255 27.9
COL.COLO4_18641 Corchorus olitorius HOM05D002037 ORTHO05D005261 1.0e-112 412.1 1215 28.3
Eucgr.C03980 Eucalyptus grandis HOM05D002037 ORTHO05D005261 1.0e-112 412.1 1264 28.2
Carub.0007s0937 Capsella rubella HOM05D002037 ORTHO05D005261 5.0e-112 409.8 1234 27.9
Cc00_g09840 Coffea canephora HOM05D002037 ORTHO05D005261 6.5e-112 409.5 1265 27.7
AUR62028065 Chenopodium quinoa HOM05D002037 ORTHO05D005261 2.5e-111 407.5 1228 28.8
CsaV3_3G046860 Cucumis sativus L. HOM05D002037 ORTHO05D005261 7.2e-111 406.0 1240 28.1
Ca_15684_v3 Cicer arietinum L. HOM05D002037 ORTHO05D005261 3.6e-110 403.7 1213 27.7
Aa31LG2G19150 Aethionema arabicum HOM05D002037 ORTHO05D005261 1.8e-109 401.4 1204 28.6
Psat5g026040 Pisum sativum HOM05D002037 ORTHO05D005261 3.0e-109 400.6 1229 27.8
SalBow4G1905 Salvia bowleyana HOM05D002037 ORTHO05D005261 2.0e-108 397.9 1198 28.5
Lj1g0006019 Lotus japonicus HOM05D002037 ORTHO05D005261 3.4e-108 397.1 1273 27.4
Lalb_Chr08g0243691 Lupinus albus HOM05D002037 ORTHO05D005261 7.5e-108 396.0 1244 27.3
AUR62020667 Chenopodium quinoa HOM05D002037 ORTHO05D005261 1.3e-107 395.2 1210 28.9
Nitab4.5_0009273g0010 Nicotiana tabacum HOM05D002037 ORTHO05D005261 1.3e-107 395.2 476 45.8
BcaNung01540 Brassica carinata HOM05D002037 ORTHO05D005261 3.7e-107 393.7 1192 28.4
DCAR_002179 Daucus carota HOM05D002037 ORTHO05D005261 3.7e-107 393.7 457 45.7
BcaB03g12684 Brassica carinata HOM05D002037 ORTHO05D005261 4.9e-107 393.3 1231 27.7
Nitab4.5_0003528g0010 Nicotiana tabacum HOM05D002037 ORTHO05D005261 4.9e-107 393.3 476 45.6
Duzib187G1591 Durio zibethinus HOM05D002037 ORTHO05D005261 1.4e-106 391.7 1252 28.0
MD08G1132100 Malus domestica HOM05D002037 ORTHO05D005261 4.1e-106 390.2 428 47.4
Thhalv10024189m.g Eutrema salsugineum HOM05D002037 ORTHO05D005261 5.4e-106 389.8 1266 26.9
EL10Ac2g03672 Beta vulgaris HOM05D002037 ORTHO05D005261 7.0e-106 389.4 1238 27.9
BolC3t21123H Brassica oleracea HOM05D002037 ORTHO05D005261 1.6e-105 388.3 1229 27.6
CARHR239070 Cardamine hirsuta HOM05D002037 ORTHO05D005261 1.6e-105 388.3 1237 27.4
A08p18770 Brassica napus HOM05D002037 ORTHO05D005261 3.5e-105 387.1 1229 27.6
BraA08t33838Z Brassica rapa HOM05D002037 ORTHO05D005261 3.5e-105 387.1 1229 27.6
Actinidia25728 Actinidia chinensis HOM05D002037 ORTHO05D005261 5.9e-105 386.3 428 48.6
Sed0015816 Sechium edule HOM05D002037 ORTHO05D005261 5.9e-105 386.3 1235 27.4
BcaC01g01107 Brassica carinata HOM05D002037 ORTHO05D005261 1.0e-104 385.6 1232 27.4
C03p88150 Brassica napus HOM05D002037 ORTHO05D005261 1.0e-104 385.6 1232 27.4
GSVIVG01035587001 Vitis vinifera HOM05D002037 ORTHO05D005261 1.3e-104 385.2 1189 27.8
VMungo1309G2917 Vigna mungo HOM05D002037 ORTHO05D005261 2.9e-104 384.0 436 46.1
MBI09_g40924_MAGBIO Magnolia biondii HOM05D002037 ORTHO05D005261 1.5e-103 381.7 1251 27.6
Atru.chr7.2709 Acer truncatum HOM05D002037 ORTHO05D005261 1.2e-102 378.6 1178 28.0
HPP92_025041 Vanilla planifolia HOM05D002037 ORTHO05D005261 2.8e-102 377.5 1014 30.5
MELO3C003650.2 Cucumis melo HOM05D002037 ORTHO05D005261 4.7e-102 376.7 419 47.5
Peaxi162Scf00213g01313 Petunia axillaris HOM05D002037 ORTHO05D005261 3.0e-101 374.0 395 49.4
ClCG05G017350 Citrullus lanatus HOM05D002037 ORTHO05D005261 6.8e-101 372.9 421 46.6
Zm00001eb434410 Zea mays HOM05D002037 ORTHO05D005261 1.1e-98 365.5 1210 27.0
PSO170G5891 Papaver somniferum HOM05D002037 ORTHO05D005261 1.8e-98 364.8 518 40.7
Hma1.2p1_0214F.1_g090650 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 2.7e-97 360.9 470 44.3
Zm00001eb076460 Zea mays HOM05D002037 ORTHO05D005261 3.6e-94 350.5 1204 26.7
Hma1.2p1_0319F.1_g123860 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 7.5e-92 342.8 478 42.9
Migut.E01409 Erythranthe guttata HOM05D002037 ORTHO05D005261 9.8e-92 342.4 1000 28.5
Hma1.2p1_2010F.1_g311000 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 9.8e-92 342.4 349 51.0
SEGI_28363 Sequoiadendron giganteum HOM05D002037 ORTHO05D005261 1.7e-91 341.7 426 43.7
Os04g0691200 Oryza sativa ssp. japonica HOM05D002037 ORTHO05D005261 3.2e-90 337.4 407 44.5
Dinv09452 Davidia involucrata HOM05D002037 ORTHO05D005261 4.3e-87 327.0 508 41.3
Glyma.14G131100 Glycine max HOM05D002037 ORTHO05D005261 2.8e-86 324.3 466 41.8
unitig_26.g8827 Utricularia gibba HOM05D002037 ORTHO05D005261 1.1e-85 322.4 443 40.9
Mapoly0062s0116 Marchantia polymorpha HOM05D002037 ORTHO05D005261 2.3e-85 321.2 422 41.0
Nn1g08375 Nelumbo nucifera HOM05D002037 ORTHO05D005261 2.2e-83 314.7 877 29.4
Pp3c1_12700 Physcomitrium patens HOM05D002037 ORTHO05D005261 1.9e-79 301.6 431 39.0
Pp3c1_12703 Physcomitrium patens HOM05D002037 ORTHO05D005261 1.9e-79 301.6 431 39.0
Pp3c2_24840 Physcomitrium patens HOM05D002037 ORTHO05D005261 2.5e-79 301.2 428 39.3
Dinv37482 Davidia involucrata HOM05D002037 ORTHO05D005261 6.8e-77 293.1 461 38.6
Rhsim07G0173400 Rhododendron simsii HOM05D002037 ORTHO05D005261 2.6e-68 264.6 316 45.6
CBR_g37392 Chara braunii HOM05D002037 ORTHO05D000002 2.7e-65 254.6 435 35.9
Hma1.2p1_1382F.1_g279390 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 6.6e-64 250.0 442 37.8
SHI50541 Sapria himalayana HOM05D002037 ORTHO05D005261 1.1e-58 232.6 286 44.1
Hma1.2p1_2176F.1_g316130 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 7.1e-58 229.9 439 35.8
AagrBONN_evm.TU.Sc2ySwM_117.676 Anthoceros agrestis HOM05D002037 ORTHO05D005261 3.9e-48 197.6 311 37.6
Lj1g0019909 Lotus japonicus HOM05D002037 ORTHO05D005261 3.8e-35 154.5 170 46.5
Sp7g29040 Schrenkiella parvula HOM05D002037 ORTHO05D005261 4.6e-33 147.5 565 27.1
Cre17.g725450 Chlamydomonas reinhardtii HOM05D002037 ORTHO05D005261 8.2e-30 136.7 177 42.4
Hma1.2p1_0214F.1_g090640 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 5.0e-27 127.5 599 24.5
Lj1g0010809 Lotus japonicus HOM05D002037 ORTHO05D005261 1.1e-21 109.8 717 23.0
Dinv09451 Davidia involucrata HOM05D002037 ORTHO05D005261 2.6e-20 105.1 320 26.9
SEGI_24212 Sequoiadendron giganteum HOM05D002037 ORTHO05D005261 2.9e-19 101.7 608 23.8
Dinv37481 Davidia involucrata HOM05D002037 ORTHO05D005261 5.0e-19 100.9 320 26.6
MBI09_g01931_MAGBIO Magnolia biondii HOM05D002037 ORTHO05D005261 1.0e-16 93.2 604 23.0
Oeu057143.1 Olea europaea HOM05D002037 ORTHO05D005261 4.4e-15 87.8 282 27.3
Hund03252 Selenicereus undatus HOM05D002037 ORTHO05D005261 1.1e-13 83.2 125 43.2
Migut.E01404 Erythranthe guttata HOM05D002037 ORTHO05D005261 4.5e-12 77.8 326 24.8
TPR.G39361 Trifolium pratense HOM05D002037 ORTHO05D005261 2.9e-11 75.1 193 30.1
Gohir.D08G274833 Gossypium hirsutum HOM05D002037 ORTHO05D005261 3.8e-11 74.7 80 46.2
Migut.E01403 Erythranthe guttata HOM05D002037 ORTHO05D005261 2.0e-07 62.4 100 38.0


User provided reference genes

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