Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01813 Aquilegia oxysepala HOM05D000824 ORTHO05D003555 1.1e-68 263.1 124 100.0
Aqoxy1G03346 Aquilegia oxysepala HOM05D000824 ORTHO05D003555 7.2e-52 207.2 135 77.0
Aqoxy4G01721 Aquilegia oxysepala HOM05D000824 ORTHO05D003555 9.7e-41 170.2 84 92.9
Aqoxy3G03684 Aquilegia oxysepala HOM05D000824 ORTHO05D003555 6.9e-39 164.1 138 63.8
TAR629G0759 Trochodendron aralioides HOM05D000824 ORTHO05D003555 1.0e-29 133.7 139 54.0
Prupe.5G205700 Prunus persica HOM05D000824 ORTHO05D003555 6.5e-29 131.0 139 51.8
MD14G1212400 Malus domestica HOM05D000824 ORTHO05D003555 1.5e-28 129.8 139 53.2
Atru.chr9.564 Acer truncatum HOM05D000824 ORTHO05D003555 3.2e-28 128.6 137 54.0
ClCG06G015600 Citrullus lanatus HOM05D000824 ORTHO05D003555 2.1e-27 125.9 140 52.1
Haze_07734 Corylus avellana HOM05D000824 ORTHO05D003555 2.7e-27 125.6 139 51.1
TAR371G0671 Trochodendron aralioides HOM05D000824 ORTHO05D003555 2.7e-27 125.6 140 52.9
Thecc.03G102500 Theobroma cacao HOM05D000824 ORTHO05D003555 4.7e-27 124.8 137 51.8
CANSAT80G1236 Cannabis sativa HOM05D000824 ORTHO05D003555 6.1e-27 124.4 139 50.4
MELO3C017228.2 Cucumis melo HOM05D000824 ORTHO05D003555 6.1e-27 124.4 140 51.4
CsaV3_1G002970 Cucumis sativus L. HOM05D000824 ORTHO05D003555 6.1e-27 124.4 140 51.4
MD06G1225500 Malus domestica HOM05D000824 ORTHO05D003555 6.1e-27 124.4 139 53.2
Sabra15G0082600 Salix brachista HOM05D000824 ORTHO05D003555 6.1e-27 124.4 140 51.4
Sabra15G0083000 Salix brachista HOM05D000824 ORTHO05D003555 6.1e-27 124.4 140 51.4
Actinidia04822 Actinidia chinensis HOM05D000824 ORTHO05D003555 1.0e-26 123.6 140 50.0
Cfa019342 Carpinus fangiana HOM05D000824 ORTHO05D003555 1.0e-26 123.6 139 52.5
VMungo1215G1142 Vigna mungo HOM05D000824 ORTHO05D003555 1.8e-26 122.9 139 48.9
Sed0027547 Sechium edule HOM05D000824 ORTHO05D003555 2.3e-26 122.5 138 50.0
AUR62021554 Chenopodium quinoa HOM05D000824 ORTHO05D003555 4.0e-26 121.7 139 49.6
Duzib205G0152 Durio zibethinus HOM05D000824 ORTHO05D003555 4.0e-26 121.7 137 51.1
QL10p019699 Quercus lobata HOM05D000824 ORTHO05D003555 4.0e-26 121.7 139 48.2
Sed0022878 Sechium edule HOM05D000824 ORTHO05D003555 4.0e-26 121.7 140 50.0
EL10Ac5g11138 Beta vulgaris HOM05D000824 ORTHO05D003555 5.2e-26 121.3 139 49.6
AUR62008537 Chenopodium quinoa HOM05D000824 ORTHO05D003555 5.2e-26 121.3 139 49.6
Gohir.A03G070300 Gossypium hirsutum HOM05D000824 ORTHO05D003555 5.2e-26 121.3 136 50.0
Ca_21770_v3 Cicer arietinum L. HOM05D000824 ORTHO05D003555 6.7e-26 120.9 139 47.5
Phvul.003G184400 Phaseolus vulgaris HOM05D000824 ORTHO05D003555 6.7e-26 120.9 139 47.5
Lalb_Chr12g0197221 Lupinus albus HOM05D000824 ORTHO05D003555 8.8e-26 120.6 139 47.5
Gohir.D03G096700 Gossypium hirsutum HOM05D000824 ORTHO05D003555 1.1e-25 120.2 136 49.3
Gorai.003G101500 Gossypium raimondii HOM05D000824 ORTHO05D003555 1.1e-25 120.2 136 49.3
Hund09917 Selenicereus undatus HOM05D000824 ORTHO05D003555 1.1e-25 120.2 139 50.4
COL.COLO4_06851 Corchorus olitorius HOM05D000824 ORTHO05D003555 1.5e-25 119.8 137 50.4
Hma1.2p1_0060F.1_g033050 Hydrangea macrophylla HOM05D000824 ORTHO05D003555 1.5e-25 119.8 139 49.6
Ciclev10019317m.g Citrus clementina HOM05D000824 ORTHO05D003555 3.3e-25 118.6 140 48.6
Lalb_Chr13g0302831 Lupinus albus HOM05D000824 ORTHO05D003555 3.3e-25 118.6 139 48.2
RcHm_v2.0_Chr7g0183161 Rosa chinensis HOM05D000824 ORTHO05D003555 3.3e-25 118.6 137 48.9
arahy.Tifrunner.gnm1.ann1.J8WCL7 Arachis hypogaea HOM05D000824 ORTHO05D003555 4.4e-25 118.2 139 46.8
Dinv17419 Davidia involucrata HOM05D000824 ORTHO05D003555 4.4e-25 118.2 139 49.6
Medtr4g109580 Medicago truncatula HOM05D000824 ORTHO05D003555 4.4e-25 118.2 139 48.2
arahy.Tifrunner.gnm1.ann1.E3U0AR Arachis hypogaea HOM05D000824 ORTHO05D003555 5.7e-25 117.9 144 45.8
CSS0009813 Camellia sinensis var. sinensis HOM05D000824 ORTHO05D003555 5.7e-25 117.9 140 50.0
CSS0043196 Camellia sinensis var. sinensis HOM05D000824 ORTHO05D003555 5.7e-25 117.9 140 50.0
Dinv22775 Davidia involucrata HOM05D000824 ORTHO05D003555 5.7e-25 117.9 135 52.6
Duzib084G0695 Durio zibethinus HOM05D000824 ORTHO05D003555 5.7e-25 117.9 137 49.6
Nn4g23436 Nelumbo nucifera HOM05D000824 ORTHO05D003555 7.5e-25 117.5 140 50.0
Peaxi162Scf00201g00330 Petunia axillaris HOM05D000824 ORTHO05D003555 7.5e-25 117.5 138 48.6
Sc04g0004360 Simmondsia chinensis HOM05D000824 ORTHO05D003555 7.5e-25 117.5 136 48.5
Sopen03g034120 Solanum pennellii HOM05D000824 ORTHO05D003555 7.5e-25 117.5 140 48.6
TWI81G1098 Tripterygium wilfordii HOM05D000824 ORTHO05D003555 7.5e-25 117.5 140 47.9
Zm00001eb400180 Zea mays HOM05D000824 ORTHO05D003555 7.5e-25 117.5 138 49.3
Ah.02g114080 Amaranthus hybridus HOM05D000824 ORTHO05D003555 1.3e-24 116.7 138 50.7
DCAR_011568 Daucus carota HOM05D000824 ORTHO05D003555 1.3e-24 116.7 139 47.5
DCAR_011569 Daucus carota HOM05D000824 ORTHO05D003555 1.3e-24 116.7 139 47.5
Lj4g0021262 Lotus japonicus HOM05D000824 ORTHO05D003555 1.3e-24 116.7 139 48.2
Solyc03g115050.3 Solanum lycopersicum HOM05D000824 ORTHO05D003555 1.3e-24 116.7 140 48.6
MSTRG.11337 Avicennia marina HOM05D000824 ORTHO05D003555 1.7e-24 116.3 137 48.2
Glyma.05G020600 Glycine max HOM05D000824 ORTHO05D003555 2.2e-24 115.9 139 46.8
GSVIVG01007849001 Vitis vinifera HOM05D000824 ORTHO05D003555 2.2e-24 115.9 140 48.6
Cc00_g07660 Coffea canephora HOM05D000824 ORTHO05D003555 2.8e-24 115.5 138 47.1
Migut.I00367 Erythranthe guttata HOM05D000824 ORTHO05D003555 2.8e-24 115.5 135 45.9
Psat4g047800 Pisum sativum HOM05D000824 ORTHO05D003555 2.8e-24 115.5 140 49.3
GSVIVG01023663001 Vitis vinifera HOM05D000824 ORTHO05D003555 2.8e-24 115.5 140 48.6
Glyma.17G078700 Glycine max HOM05D000824 ORTHO05D003555 3.7e-24 115.2 139 46.8
Os03g0214100 Oryza sativa ssp. japonica HOM05D000824 ORTHO05D003555 3.7e-24 115.2 140 47.1
Zm00001eb008630 Zea mays HOM05D000824 ORTHO05D003555 3.7e-24 115.2 138 47.8
CiPaw.11G054100 Carya illinoinensis HOM05D000824 ORTHO05D003555 4.8e-24 114.8 139 46.8
SGA_v2.0_scaffold25G10955 Striga asiatica HOM05D000824 ORTHO05D003555 4.8e-24 114.8 139 46.0
Nn3g17458 Nelumbo nucifera HOM05D000824 ORTHO05D003555 6.3e-24 114.4 133 48.1
PGSC0003DMG400024634 Solanum tuberosum HOM05D000824 ORTHO05D003555 6.3e-24 114.4 140 47.9
Oeu044875.1 Olea europaea HOM05D000824 ORTHO05D003555 8.2e-24 114.0 139 49.6
Potri.015G057300 Populus trichocarpa HOM05D000824 ORTHO05D003555 8.2e-24 114.0 138 46.4
THA.LOC104804633 Tarenaya hassleriana HOM05D000824 ORTHO05D003555 8.2e-24 114.0 140 45.7
Eucgr.B00599 Eucalyptus grandis HOM05D000824 ORTHO05D003555 1.8e-23 112.8 139 46.8
Lj5A102T96 Lonicera japonica HOM05D000824 ORTHO05D003555 1.8e-23 112.8 139 45.3
Nitab4.5_0001485g0110 Nicotiana tabacum HOM05D000824 ORTHO05D003555 1.8e-23 112.8 145 44.8
DCAR_023168 Daucus carota HOM05D000824 ORTHO05D003555 2.4e-23 112.5 139 47.5
Nitab4.5_0009401g0060 Nicotiana tabacum HOM05D000824 ORTHO05D003555 2.4e-23 112.5 140 46.4
GSVIVG01032320001 Vitis vinifera HOM05D000824 ORTHO05D003555 2.4e-23 112.5 140 47.9
Thhalv10003822m.g Eutrema salsugineum HOM05D000824 ORTHO05D003555 5.3e-23 111.3 139 47.5
PGR083G2843 Punica granatum HOM05D000824 ORTHO05D003555 5.3e-23 111.3 140 46.4
TPR.G2021 Trifolium pratense HOM05D000824 ORTHO05D003555 5.3e-23 111.3 140 45.7
PSO478G2603 Papaver somniferum HOM05D000824 ORTHO05D003555 7.0e-23 110.9 137 46.7
THA.LOC104819400 Tarenaya hassleriana HOM05D000824 ORTHO05D003555 7.0e-23 110.9 140 47.1
Zm00001eb282530 Zea mays HOM05D000824 ORTHO05D003555 7.0e-23 110.9 138 44.9
CARHR274710 Cardamine hirsuta HOM05D000824 ORTHO05D003555 9.1e-23 110.5 136 45.6
Lj9C471T8 Lonicera japonica HOM05D000824 ORTHO05D003555 9.1e-23 110.5 140 47.1
BcaC06g33184 Brassica carinata HOM05D000824 ORTHO05D003555 1.6e-22 109.8 148 46.6
CAN.G1228.20 Capsicum annuum HOM05D000824 ORTHO05D003555 2.0e-22 109.4 140 45.7
Manes.06G084200 Manihot esculenta HOM05D000824 ORTHO05D003555 2.0e-22 109.4 140 46.4
Rhsim08G0145600 Rhododendron simsii HOM05D000824 ORTHO05D003555 2.0e-22 109.4 140 47.1
Hund02583 Selenicereus undatus HOM05D000824 ORTHO05D003555 2.0e-22 109.4 140 47.9
AT5G61000 Arabidopsis thaliana HOM05D000824 ORTHO05D003555 2.7e-22 109.0 136 45.6
MSTRG.22957 Avicennia marina HOM05D000824 ORTHO05D003555 2.7e-22 109.0 140 44.3
FAN08G1674 Fragaria x ananassa HOM05D000824 ORTHO05D003555 2.7e-22 109.0 137 45.3
FAN18G4284 Fragaria x ananassa HOM05D000824 ORTHO05D003555 2.7e-22 109.0 137 46.0
AL8G37660 Arabidopsis lyrata HOM05D000824 ORTHO05D003555 3.5e-22 108.6 136 45.6
BcaC04g23467 Brassica carinata HOM05D000824 ORTHO05D003555 3.5e-22 108.6 139 45.3
BcaNung06900 Brassica carinata HOM05D000824 ORTHO05D003555 3.5e-22 108.6 142 45.1
A09p07190 Brassica napus HOM05D000824 ORTHO05D003555 3.5e-22 108.6 139 45.3
C09p08030 Brassica napus HOM05D000824 ORTHO05D003555 3.5e-22 108.6 139 45.3
FAN13G2002 Fragaria x ananassa HOM05D000824 ORTHO05D003555 3.5e-22 108.6 137 45.3
Sp2g24310 Schrenkiella parvula HOM05D000824 ORTHO05D003555 4.5e-22 108.2 139 45.3
BraA03t13794Z Brassica rapa HOM05D000824 ORTHO05D003555 5.9e-22 107.8 139 46.0
Carub.0008s2169 Capsella rubella HOM05D000824 ORTHO05D003555 5.9e-22 107.8 136 44.9
Lsat_1_v5_gn_1_14461 Lactuca sativa HOM05D000824 ORTHO05D003555 5.9e-22 107.8 137 46.0
Aa31LG3G18510 Aethionema arabicum HOM05D000824 ORTHO05D003555 7.7e-22 107.5 136 46.3
ATR0177G023 Amborella trichopoda HOM05D000824 ORTHO05D003555 7.7e-22 107.5 137 47.4
BolC9t53717H Brassica oleracea HOM05D000824 ORTHO05D003555 7.7e-22 107.5 139 44.6
BraA09t36368Z Brassica rapa HOM05D000824 ORTHO05D003555 7.7e-22 107.5 139 44.6
Cpa.g.sc1086.1 Carica papaya HOM05D000824 ORTHO05D003555 7.7e-22 107.5 137 45.3
A03p03540 Brassica napus HOM05D000824 ORTHO05D003555 1.0e-21 107.1 143 44.8
HPP92_014050 Vanilla planifolia HOM05D000824 ORTHO05D003555 1.0e-21 107.1 137 46.0
Ah.11g047720 Amaranthus hybridus HOM05D000824 ORTHO05D003555 1.3e-21 106.7 140 47.9
C03p03990 Brassica napus HOM05D000824 ORTHO05D003555 1.3e-21 106.7 142 45.1
BraA03t09704Z Brassica rapa HOM05D000824 ORTHO05D003555 1.3e-21 106.7 143 44.8
PSO017G4603 Papaver somniferum HOM05D000824 ORTHO05D003555 1.3e-21 106.7 137 46.0
SGA_v2.0_scaffold28G11745 Striga asiatica HOM05D000824 ORTHO05D003555 1.3e-21 106.7 139 43.9
BcaB01g05683 Brassica carinata HOM05D000824 ORTHO05D003555 1.7e-21 106.3 142 45.1
Thhalv10013014m.g Eutrema salsugineum HOM05D000824 ORTHO05D003555 1.7e-21 106.3 141 41.8
BolC3t12936H Brassica oleracea HOM05D000824 ORTHO05D003555 2.2e-21 105.9 142 45.1
vmacro17614 Vaccinium macrocarpon HOM05D000824 ORTHO05D003555 2.9e-21 105.5 140 46.4
AL6G18370 Arabidopsis lyrata HOM05D000824 ORTHO05D003555 3.8e-21 105.1 139 43.2
AT5G08020 Arabidopsis thaliana HOM05D000824 ORTHO05D003555 3.8e-21 105.1 140 42.9
BcaB01g05642 Brassica carinata HOM05D000824 ORTHO05D003555 5.0e-21 104.8 142 44.4
Sp6g34920 Schrenkiella parvula HOM05D000824 ORTHO05D003555 5.0e-21 104.8 140 44.3
Carub.0006s0691 Capsella rubella HOM05D000824 ORTHO05D003555 2.5e-20 102.4 142 43.0
CARHR205160 Cardamine hirsuta HOM05D000824 ORTHO05D003555 4.2e-20 101.7 142 43.0
unitig_62.g23555 Utricularia gibba HOM05D000824 ORTHO05D003555 7.2e-20 100.9 141 43.3
HanXRQChr02g0044771 Helianthus annuus HOM05D000824 ORTHO05D003555 1.6e-19 99.8 137 43.1
C05p07210 Brassica napus HOM05D000824 ORTHO05D003555 2.7e-19 99.0 141 41.8
A01p33840 Brassica napus HOM05D000824 ORTHO05D003555 1.0e-18 97.1 125 44.8
BcaC05g24775 Brassica carinata HOM05D000824 ORTHO05D003555 2.3e-18 95.9 140 40.7
BolC5t29475H Brassica oleracea HOM05D000824 ORTHO05D003555 2.3e-18 95.9 140 40.7
ECA247G3309 Erigeron canadensis HOM05D000824 ORTHO05D003555 3.0e-18 95.5 137 43.1
HanXRQChr16g0517661 Helianthus annuus HOM05D000824 ORTHO05D003555 8.8e-18 94.0 135 41.5
Actinidia16131 Actinidia chinensis HOM05D000824 ORTHO05D003555 7.5e-17 90.9 71 63.4
Eucgr.B00601 Eucalyptus grandis HOM05D000824 ORTHO05D003555 2.2e-16 89.4 139 41.7
BcaB08g37297 Brassica carinata HOM05D000824 ORTHO05D003555 8.3e-16 87.4 140 40.7
SEGI_23554 Sequoiadendron giganteum HOM05D000824 ORTHO05D003555 8.3e-16 87.4 129 40.3
SHI27089 Sapria himalayana HOM05D000824 ORTHO05D003555 2.4e-15 85.9 60 68.3
Medtr4g109590 Medicago truncatula HOM05D000824 ORTHO05D003555 5.4e-15 84.7 117 41.0
BolC1t03820H Brassica oleracea HOM05D000824 ORTHO05D003555 5.0e-13 78.2 63 55.6
GSVIVG01037063001 Vitis vinifera HOM05D000824 ORTHO05D003555 1.1e-12 77.0 62 59.7
Oeu061166.1 Olea europaea HOM05D000824 ORTHO05D003555 2.5e-12 75.9 52 67.3
Pp3c1_20770 Physcomitrium patens HOM05D000824 ORTHO05D003555 4.2e-12 75.1 139 30.9
C01p38580 Brassica napus HOM05D000824 ORTHO05D003555 5.5e-12 74.7 63 54.0
Aqoxy6G02323 Aquilegia oxysepala HOM05D000824 ORTHO05D003555 1.6e-11 73.2 38 84.2
Mapoly0109s0044 Marchantia polymorpha HOM05D000824 ORTHO05D003555 1.6e-11 73.2 141 33.3
GSVIVG01020590001 Vitis vinifera HOM05D000824 ORTHO05D003555 8.0e-11 70.9 62 53.2
SMO358G0534 Selaginella moellendorffii HOM05D000824 ORTHO05D003555 2.6e-09 65.9 134 33.6
Oeu051198.1 Olea europaea HOM05D000321 ORTHO05D000204 5.7e-09 64.7 105 41.9
AL6G19570 Arabidopsis lyrata HOM05D000824 ORTHO05D003555 9.8e-09 63.9 52 50.0
C07p44760 Brassica napus HOM05D000824 ORTHO05D003555 2.2e-08 62.8 102 40.2
CBR_g23266 Chara braunii HOM05D000824 ORTHO05D003555 2.2e-08 62.8 146 31.5
AL6G18410 Arabidopsis lyrata HOM05D000824 ORTHO05D003555 2.8e-08 62.4 104 37.5
A03p46710 Brassica napus HOM05D000824 ORTHO05D003555 4.1e-07 58.5 102 38.2


User provided reference genes

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