Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04116 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 3.0e-215 751.5 366 100.0
TAR629G1722 Trochodendron aralioides HOM05D006076 ORTHO05D007506 1.3e-146 523.5 376 70.2
PSO782G3474 Papaver somniferum HOM05D006076 ORTHO05D007506 2.8e-136 489.2 369 66.9
PSO063G3081 Papaver somniferum HOM05D006076 ORTHO05D007506 2.0e-134 483.0 369 66.4
Dinv19079 Davidia involucrata HOM05D006076 ORTHO05D007506 3.9e-130 468.8 365 65.2
Cc07_g12790 Coffea canephora HOM05D006076 ORTHO05D007506 8.7e-130 467.6 368 64.4
Hma1.2p1_0034F.1_g021380 Hydrangea macrophylla HOM05D006076 ORTHO05D007506 1.5e-129 466.8 362 63.0
MD08G1242300 Malus domestica HOM05D006076 ORTHO05D007506 1.3e-128 463.8 364 64.0
CiPaw.11G066500 Carya illinoinensis HOM05D006076 ORTHO05D007506 1.6e-128 463.4 370 62.2
QL04p075342 Quercus lobata HOM05D006076 ORTHO05D007506 3.6e-128 462.2 354 64.4
CSS0031022 Camellia sinensis var. sinensis HOM05D006076 ORTHO05D007506 1.4e-127 460.3 377 63.7
Nitab4.5_0002648g0050 Nicotiana tabacum HOM05D006076 ORTHO05D007506 1.8e-127 459.9 365 64.1
MD15G1436000 Malus domestica HOM05D006076 ORTHO05D007506 4.0e-127 458.8 363 62.3
Lalb_Chr17g0345871 Lupinus albus HOM05D006076 ORTHO05D007506 1.2e-126 457.2 370 61.4
Nitab4.5_0000005g0100 Nicotiana tabacum HOM05D006076 ORTHO05D007506 1.2e-126 457.2 365 63.6
Thecc.04G060400 Theobroma cacao HOM05D006076 ORTHO05D007506 1.2e-126 457.2 361 62.3
GSVIVG01013049001 Vitis vinifera HOM05D006076 ORTHO05D007506 1.2e-126 457.2 372 61.3
Rhsim10G0185200 Rhododendron simsii HOM05D006076 ORTHO05D007506 4.4e-126 455.3 365 63.8
TWI53G1019 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 3.8e-125 452.2 360 62.2
Sabra17G0117900 Salix brachista HOM05D006076 ORTHO05D007506 2.1e-123 446.4 353 64.3
Ciclev10005246m.g Citrus clementina HOM05D006076 ORTHO05D007506 2.7e-123 446.0 367 62.1
DCAR_003407 Daucus carota HOM05D006076 ORTHO05D007506 3.5e-123 445.7 363 61.7
Sopen02g011760 Solanum pennellii HOM05D006076 ORTHO05D007506 3.5e-123 445.7 365 61.1
TWI74G1437 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 7.9e-123 444.5 360 61.7
COL.COLO4_20049 Corchorus olitorius HOM05D006076 ORTHO05D007506 1.0e-122 444.1 365 60.0
Manes.01G123200 Manihot esculenta HOM05D006076 ORTHO05D007506 1.7e-122 443.4 362 63.0
Potri.017G139700 Populus trichocarpa HOM05D006076 ORTHO05D007506 5.1e-122 441.8 355 63.7
LjContig00141g0009861 Lotus japonicus HOM05D006076 ORTHO05D007506 8.7e-122 441.0 361 61.2
RcHm_v2.0_Chr7g0220631 Rosa chinensis HOM05D006076 ORTHO05D007506 1.1e-121 440.7 359 61.0
Actinidia17164 Actinidia chinensis HOM05D006076 ORTHO05D007506 1.5e-121 440.3 370 60.5
FAN08G1959 Fragaria x ananassa HOM05D006076 ORTHO05D007506 1.9e-121 439.9 359 60.2
CANSAT11G2533 Cannabis sativa HOM05D006076 ORTHO05D007506 4.3e-121 438.7 359 59.9
Gohir.D11G176000 Gossypium hirsutum HOM05D006076 ORTHO05D007506 4.3e-121 438.7 366 60.9
MSTRG.15638 Avicennia marina HOM05D006076 ORTHO05D007506 7.4e-121 438.0 365 60.3
SGA_v2.0_scaffold115G32050 Striga asiatica HOM05D006076 ORTHO05D007506 2.1e-120 436.4 361 60.4
Psat2g042920 Pisum sativum HOM05D006076 ORTHO05D007506 2.8e-120 436.0 365 58.1
RcHm_v2.0_Chr2g0106631 Rosa chinensis HOM05D006076 ORTHO05D007506 3.6e-120 435.6 357 60.2
SalBow5G0086 Salvia bowleyana HOM05D006076 ORTHO05D007506 3.6e-120 435.6 362 61.0
SalBow5G5467 Salvia bowleyana HOM05D006076 ORTHO05D007506 3.6e-120 435.6 362 61.0
TPR.G5335 Trifolium pratense HOM05D006076 ORTHO05D007506 3.6e-120 435.6 363 59.8
FAN18G0334 Fragaria x ananassa HOM05D006076 ORTHO05D007506 6.2e-120 434.9 361 60.1
FvH4_5g28670 Fragaria vesca HOM05D006076 ORTHO05D007506 1.1e-119 434.1 361 60.1
Eucgr.J01641 Eucalyptus grandis HOM05D006076 ORTHO05D007506 4.0e-119 432.2 364 58.8
Phvul.008G241000 Phaseolus vulgaris HOM05D006076 ORTHO05D007506 4.0e-119 432.2 362 59.4
Ca_05760_v3 Cicer arietinum L. HOM05D006076 ORTHO05D007506 5.3e-119 431.8 363 57.6
Glyma.14G210200 Glycine max HOM05D006076 ORTHO05D007506 5.3e-119 431.8 363 58.7
FAN04G0499 Fragaria x ananassa HOM05D006076 ORTHO05D007506 6.9e-119 431.4 359 60.2
arahy.Tifrunner.gnm1.ann1.T03I92 Arachis hypogaea HOM05D006076 ORTHO05D007506 1.5e-118 430.3 367 60.5
Glyma.02G240700 Glycine max HOM05D006076 ORTHO05D007506 2.6e-118 429.5 363 59.5
VMungo0647G0600 Vigna mungo HOM05D006076 ORTHO05D007506 2.6e-118 429.5 362 59.4
Sc09g0004490 Simmondsia chinensis HOM05D006076 ORTHO05D007506 3.4e-118 429.1 361 60.4
Solyc02g036380.3 Solanum lycopersicum HOM05D006076 ORTHO05D007506 4.5e-118 428.7 413 54.2
arahy.Tifrunner.gnm1.ann1.19NIP2 Arachis hypogaea HOM05D006076 ORTHO05D007506 5.8e-118 428.3 363 60.3
CAN.G123.2 Capsicum annuum HOM05D006076 ORTHO05D007506 1.1e-116 424.1 353 61.5
EL10Ac4g08929 Beta vulgaris HOM05D006076 ORTHO05D007506 1.4e-116 423.7 370 58.4
THA.LOC104820862 Tarenaya hassleriana HOM05D006076 ORTHO05D007506 3.2e-116 422.5 360 58.9
PGR042G3996 Punica granatum HOM05D006076 ORTHO05D007506 4.2e-116 422.2 373 58.7
Migut.K00743 Erythranthe guttata HOM05D006076 ORTHO05D007506 1.6e-115 420.2 367 56.7
AUR62004772 Chenopodium quinoa HOM05D006076 ORTHO05D007506 2.7e-115 419.5 364 59.3
Oeu012318.2 Olea europaea HOM05D006076 ORTHO05D007506 4.6e-115 418.7 437 51.3
Medtr5g076920 Medicago truncatula HOM05D006076 ORTHO05D007506 7.9e-115 417.9 373 56.0
Thhalv10014026m.g Eutrema salsugineum HOM05D006076 ORTHO05D007506 1.0e-114 417.5 370 56.5
AT5G17290 Arabidopsis thaliana HOM05D006076 ORTHO05D007506 1.8e-114 416.8 370 56.5
ATR0807G042 Amborella trichopoda HOM05D006076 ORTHO05D007506 1.5e-113 413.7 370 56.8
Cfa019426 Carpinus fangiana HOM05D006076 ORTHO05D007506 2.5e-113 412.9 342 60.8
Manes.02G080800 Manihot esculenta HOM05D006076 ORTHO05D007506 3.3e-113 412.5 360 58.3
AL6G28370 Arabidopsis lyrata HOM05D006076 ORTHO05D007506 5.6e-113 411.8 370 55.9
ClCG05G010470 Citrullus lanatus HOM05D006076 ORTHO05D007506 9.6e-113 411.0 369 57.5
Sp6g26940 Schrenkiella parvula HOM05D006076 ORTHO05D007506 9.6e-113 411.0 367 56.7
MELO3C019565.2 Cucumis melo HOM05D006076 ORTHO05D007506 2.1e-112 409.8 360 58.3
CsaV3_3G018020 Cucumis sativus L. HOM05D006076 ORTHO05D007506 2.1e-112 409.8 363 57.6
BcaC03g18547 Brassica carinata HOM05D006076 ORTHO05D007506 6.2e-112 408.3 367 55.0
Gorai.007G188600 Gossypium raimondii HOM05D006076 ORTHO05D007506 8.1e-112 407.9 439 50.6
CARHR195920 Cardamine hirsuta HOM05D006076 ORTHO05D007506 1.4e-111 407.1 371 55.8
unitig_0.g2639 Utricularia gibba HOM05D006076 ORTHO05D007506 1.8e-111 406.8 363 55.4
C02p08950 Brassica napus HOM05D006076 ORTHO05D007506 3.1e-111 406.0 368 55.2
BolC2t06804H Brassica oleracea HOM05D006076 ORTHO05D007506 3.1e-111 406.0 368 55.2
BraA02t05373Z Brassica rapa HOM05D006076 ORTHO05D007506 6.9e-111 404.8 368 55.2
Carub.0006s1548 Capsella rubella HOM05D006076 ORTHO05D007506 2.0e-110 403.3 371 55.8
Duzib138G0191 Durio zibethinus HOM05D006076 ORTHO05D007506 2.0e-110 403.3 355 57.5
BcaB08g36791 Brassica carinata HOM05D006076 ORTHO05D007506 2.6e-110 402.9 367 54.0
HanXRQChr16g0532291 Helianthus annuus HOM05D006076 ORTHO05D007506 2.6e-110 402.9 366 55.7
A02p04100 Brassica napus HOM05D006076 ORTHO05D007506 4.5e-110 402.1 368 54.9
Lsat_1_v5_gn_3_67061 Lactuca sativa HOM05D006076 ORTHO05D007506 5.8e-110 401.7 366 54.9
vmacro20467 Vaccinium macrocarpon HOM05D006076 ORTHO05D007506 5.8e-110 401.7 489 47.4
Aa31LG11G12390 Aethionema arabicum HOM05D006076 ORTHO05D007506 2.2e-109 399.8 369 54.7
BcaC04g18810 Brassica carinata HOM05D006076 ORTHO05D007506 3.8e-109 399.1 368 54.3
CDE04G2995 Ceratophyllum demersum HOM05D006076 ORTHO05D007506 8.4e-109 397.9 351 56.4
BraA10t44270Z Brassica rapa HOM05D006076 ORTHO05D007506 1.1e-108 397.5 365 55.9
A10p22110 Brassica napus HOM05D006076 ORTHO05D007506 9.3e-108 394.4 365 55.3
Solyc06g043140.4 Solanum lycopersicum HOM05D006076 ORTHO05D007506 9.3e-108 394.4 365 56.7
BolC9t58826H Brassica oleracea HOM05D006076 ORTHO05D007506 2.1e-107 393.3 364 54.1
Os02g0117800 Oryza sativa ssp. japonica HOM05D006076 ORTHO05D007506 3.5e-107 392.5 363 54.8
Lj4A252G57 Lonicera japonica HOM05D006076 ORTHO05D007506 3.3e-105 386.0 332 62.3
SEGI_25199 Sequoiadendron giganteum HOM05D006076 ORTHO05D007506 3.4e-102 375.9 388 50.8
C09p59900 Brassica napus HOM05D006076 ORTHO05D007506 5.0e-101 372.1 409 48.4
Zm00001eb230080 Zea mays HOM05D006076 ORTHO05D007506 6.5e-101 371.7 364 49.2
RcHm_v2.0_Chr5g0080521 Rosa chinensis HOM05D006076 ORTHO05D007506 2.5e-100 369.8 312 58.0
Gohir.A11G169800 Gossypium hirsutum HOM05D006076 ORTHO05D007506 3.2e-100 369.4 366 54.4
Nn4g24719 Nelumbo nucifera HOM05D006076 ORTHO05D007506 7.2e-100 368.2 302 60.9
Sed0003951 Sechium edule HOM05D006076 ORTHO05D007506 6.3e-96 355.1 358 52.8
Hund22204 Selenicereus undatus HOM05D006076 ORTHO05D007506 5.3e-95 352.1 360 52.2
Atru.chr1.2153 Acer truncatum HOM05D006076 ORTHO05D007506 9.0e-95 351.3 236 71.6
ECA246G5189 Erigeron canadensis HOM05D006076 ORTHO05D000091 3.4e-94 349.4 294 59.2
Mapoly0019s0054 Marchantia polymorpha HOM05D006076 ORTHO05D007506 3.9e-90 335.9 419 43.0
Ah.05g177670 Amaranthus hybridus HOM05D006076 ORTHO05D007506 5.1e-90 335.5 333 52.6
Peaxi162Scf00294g00628 Petunia axillaris HOM05D006076 ORTHO05D007506 2.6e-89 333.2 361 52.4
MBI06_g30602_MAGBIO Magnolia biondii HOM05D006076 ORTHO05D007506 1.7e-88 330.5 292 58.6
AagrBONN_evm.TU.Sc2ySwM_344.1639 Anthoceros agrestis HOM05D006076 ORTHO05D007506 3.7e-88 329.3 406 42.6
Actinidia40417 Actinidia chinensis HOM05D006076 ORTHO05D007506 3.8e-85 319.3 243 65.0
Prupe.1G579800 Prunus persica HOM05D006076 ORTHO05D007506 1.1e-81 307.8 197 71.6
Pp3c4_11110 Physcomitrium patens HOM05D006076 ORTHO05D007506 9.7e-81 304.7 376 42.8
AUR62037480 Chenopodium quinoa HOM05D006076 ORTHO05D007506 1.5e-76 290.8 195 69.2
Cpa.g.sc178.26 Carica papaya HOM05D006076 ORTHO05D007506 3.1e-71 273.1 158 75.9
SMO116G0154 Selaginella moellendorffii HOM05D006076 ORTHO05D007506 7.0e-71 271.9 374 40.4
Haze_08537 Corylus avellana HOM05D006076 ORTHO05D007506 2.4e-63 246.9 366 41.0
TAR629G0059 Trochodendron aralioides HOM05D006076 ORTHO05D007506 2.0e-62 243.8 129 82.9
QL04p075158 Quercus lobata HOM05D006076 ORTHO05D007506 7.7e-62 241.9 229 55.0
QL04p075308 Quercus lobata HOM05D006076 ORTHO05D007506 1.8e-58 230.7 132 78.8
Aqoxy531s001 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 8.8e-58 228.4 143 88.1
HPP92_002577 Vanilla planifolia HOM05D006076 ORTHO05D007506 1.2e-49 201.4 260 44.6
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 1.2e-49 201.4 260 44.6
CBR_g50474 Chara braunii HOM05D001161 ORTHO05D000497 4.1e-39 166.4 124 55.6
Cpa.g.sc178.27 Carica papaya HOM05D006076 ORTHO05D007506 6.0e-38 162.5 176 52.3
QL04p043726 Quercus lobata HOM05D000176 ORTHO05D007506 3.4e-33 146.7 81 79.0
QL04p075322 Quercus lobata HOM05D006076 ORTHO05D007506 6.6e-29 132.5 75 81.3
HanXRQChr02g0046461 Helianthus annuus HOM05D006076 ORTHO05D007506 2.5e-28 130.6 208 38.0
HanXRQChr16g0508921 Helianthus annuus HOM05D006076 ORTHO05D007506 2.5e-28 130.6 208 38.0
BcaNung00408 Brassica carinata HOM05D006076 ORTHO05D007506 8.1e-27 125.6 221 40.3
QL04p075364 Quercus lobata HOM05D000397 ORTHO05D007506 1.2e-19 101.7 127 46.5
Cre14.g630907 Chlamydomonas reinhardtii HOM05D006076 ORTHO05D007506 2.6e-17 94.0 204 31.4
AUR62037479 Chenopodium quinoa HOM05D006076 ORTHO05D007506 3.8e-16 90.1 130 45.4
Actinidia40416 Actinidia chinensis HOM05D006076 ORTHO05D007506 7.3e-12 75.9 103 43.7


User provided reference genes

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