Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 0.0e+00 1097.0 548 100.0
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 6.7e-227 790.8 559 72.3
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 5.0e-222 774.6 550 71.1
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 3.3e-218 761.9 554 69.7
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 3.2e-213 745.3 555 69.4
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 3.9e-211 738.4 559 67.8
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 1.4e-208 729.9 548 68.8
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 1.5e-207 726.5 550 68.0
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 1.5e-207 726.5 550 67.5
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 4.5e-207 724.9 555 67.9
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 5.9e-207 724.5 526 66.9
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 5.0e-206 721.5 553 68.2
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 6.5e-206 721.1 548 65.5
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 6.5e-206 721.1 553 67.5
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 2.5e-205 719.2 556 66.9
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 1.4e-203 713.4 606 62.0
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 2.3e-203 712.6 548 64.4
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 5.2e-203 711.4 549 65.6
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 8.8e-203 710.7 552 67.4
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 1.1e-202 710.3 512 70.3
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 1.7e-201 706.4 553 65.8
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 3.7e-201 705.3 557 63.2
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 3.7e-201 705.3 528 67.4
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 4.8e-201 704.9 550 64.4
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 1.4e-200 703.4 539 65.7
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 1.8e-200 703.0 536 65.1
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 4.1e-200 701.8 554 65.0
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 9.1e-200 700.7 536 64.9
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 1.6e-199 699.9 525 67.4
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 3.5e-199 698.7 580 62.8
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 4.5e-199 698.4 548 65.1
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 2.9e-198 695.7 552 62.9
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 3.8e-198 695.3 549 63.4
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 3.8e-198 695.3 548 65.0
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 1.5e-197 693.3 556 62.9
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 1.5e-197 693.3 554 64.1
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 1.5e-197 693.3 559 65.3
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 1.9e-197 693.0 533 64.4
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 2.5e-197 692.6 560 63.2
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 2.5e-197 692.6 553 64.7
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 4.7e-196 688.3 526 66.3
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 8.0e-196 687.6 557 63.9
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 1.0e-195 687.2 568 63.7
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 1.4e-195 686.8 552 63.9
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 1.4e-195 686.8 548 63.7
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 1.8e-195 686.4 574 63.4
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 2.3e-195 686.0 556 64.0
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 3.0e-195 685.6 550 63.1
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 8.8e-195 684.1 571 62.9
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 9.7e-194 680.6 554 64.3
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 2.2e-193 679.5 549 63.6
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 3.7e-193 678.7 531 63.8
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.4e-192 676.8 578 61.4
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 1.8e-192 676.4 556 62.4
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 2.4e-192 676.0 555 62.2
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 7.0e-192 674.5 559 62.1
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 7.0e-192 674.5 566 61.7
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 1.6e-191 673.3 548 62.2
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 2.0e-191 672.9 549 63.9
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 3.5e-191 672.2 526 65.2
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 4.5e-191 671.8 552 63.2
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 1.0e-190 670.6 561 61.9
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 1.3e-190 670.2 550 62.0
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 1.3e-190 670.2 550 62.0
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 1.7e-190 669.8 535 64.9
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 2.9e-190 669.1 559 62.3
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 1.2e-188 663.7 552 62.7
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 2.7e-188 662.5 579 59.6
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.4e-187 660.2 561 61.9
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 1.8e-187 659.8 552 62.1
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 7.5e-186 654.4 533 64.4
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 4.1e-184 648.7 531 63.5
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 2.0e-183 646.4 545 61.1
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 2.7e-183 646.0 528 62.7
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 1.3e-182 643.7 538 61.3
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 5.0e-182 641.7 650 54.9
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 2.5e-181 639.4 581 59.0
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 3.6e-180 635.6 555 60.9
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 5.2e-179 631.7 544 59.0
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 7.8e-175 617.8 493 66.5
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 6.6e-174 614.8 588 56.5
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 2.5e-173 612.8 573 55.0
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 1.6e-172 610.1 524 60.1
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 6.1e-172 608.2 497 61.4
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 1.8e-171 606.7 470 65.1
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 5.2e-171 605.1 556 57.6
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 5.8e-170 601.7 456 65.4
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 2.2e-169 599.7 548 57.3
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 8.3e-169 597.8 569 57.1
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 1.1e-163 580.9 472 62.1
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 2.3e-163 579.7 549 56.3
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 2.2e-161 573.2 388 71.9
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.6e-159 567.0 548 56.8
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 3.9e-158 562.4 585 55.0
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 4.3e-157 558.9 523 59.8
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 6.0e-151 538.5 525 56.6
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 6.6e-150 535.0 406 64.5
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.4e-147 526.6 542 54.6
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 1.3e-140 504.2 532 49.2
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 2.4e-139 500.0 414 62.3
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 5.3e-139 498.8 551 47.5
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 3.8e-129 466.1 271 78.2
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 1.6e-127 460.7 275 77.1
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 1.0e-126 458.0 473 53.1
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 7.4e-117 425.2 342 60.5
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 9.6e-117 424.9 523 48.2
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 5.5e-112 409.1 539 46.6
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 7.2e-112 408.7 391 60.4
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 3.0e-110 403.3 320 58.1
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 9.7e-101 371.7 217 77.4
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 2.4e-99 367.1 378 56.6
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 3.9e-94 349.7 385 53.0
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 1.7e-89 334.3 411 49.4
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 8.0e-87 325.5 270 60.0
Cc11_g14240 Coffea canephora HOM05D005206 ORTHO05D006219 2.7e-82 310.5 183 75.4
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 2.2e-81 307.4 559 34.2
PGSC0003DMG400015600 Solanum tuberosum HOM05D005206 ORTHO05D006219 3.2e-80 303.5 186 75.3
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 3.4e-77 293.5 494 35.6
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 9.8e-77 292.0 295 55.3
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 1.1e-75 288.5 498 37.1
HPP92_017072 Vanilla planifolia HOM05D005206 ORTHO05D006219 9.1e-75 285.4 208 65.9
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 2.8e-68 263.8 313 44.1
Cpa.g.sc5.344 Carica papaya HOM05D005206 ORTHO05D006219 4.0e-62 243.4 265 55.5
AUR62026578 Chenopodium quinoa HOM05D005206 ORTHO05D006219 4.0e-62 243.4 297 50.5
Cpa.g.sc5.345 Carica papaya HOM05D005206 ORTHO05D006219 3.4e-61 240.4 140 77.9
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 5.7e-61 239.6 314 41.7
MD16G1086600 Malus domestica HOM05D005206 ORTHO05D006219 3.7e-60 236.9 282 51.4
VMungo0464G1917 Vigna mungo HOM05D005206 ORTHO05D006219 4.7e-55 219.9 277 48.0
Cpa.g.sc5.348 Carica papaya HOM05D005206 ORTHO05D006219 1.0e-49 202.2 112 81.2
HPP92_017071 Vanilla planifolia HOM05D005206 ORTHO05D006219 2.4e-43 181.0 239 46.9
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 7.8e-42 176.0 434 30.4
MCO16G526 Micromonas commoda HOM05D005206 ORTHO05D006219 2.7e-34 151.0 380 28.7
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 2.7e-34 151.0 369 27.4
VMungo0464G2026 Vigna mungo HOM05D005206 ORTHO05D006219 1.7e-33 148.3 93 73.1
SHI08109 Sapria himalayana HOM05D005206 ORTHO05D006219 1.5e-32 145.2 122 58.2
FvH4_6g23350 Fragaria vesca HOM05D005206 ORTHO05D006219 4.7e-31 140.2 82 78.0
FvH4_5g07370 Fragaria vesca HOM05D003058 ORTHO05D003464 8.7e-25 119.4 99 60.6
RcHm_v2.0_Chr3g0484611 Rosa chinensis HOM05D005206 ORTHO05D006219 2.6e-21 107.8 62 80.6
Cre17.g716101 Chlamydomonas reinhardtii HOM05D005206 ORTHO05D006219 3.3e-16 90.9 210 29.5
HPP92_017068 Vanilla planifolia HOM05D005206 ORTHO05D006219 2.0e-13 81.6 60 63.3
Ca_04200_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 1.4e-11 75.5 54 61.1
PRCOL_00003580 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 1.3e-09 68.9 168 28.6
RcHm_v2.0_Chr4g0401081 Rosa chinensis HOM05D005206 ORTHO05D006219 4.8e-07 60.5 40 70.0


User provided reference genes

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