Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02662 Aquilegia oxysepala HOM05D005026 ORTHO05D005981 1.8e-179 632.5 322 100.0
Nn3g19196 Nelumbo nucifera HOM05D005026 ORTHO05D005981 1.1e-131 473.8 320 76.2
TAR629G1604 Trochodendron aralioides HOM05D005026 ORTHO05D005981 1.0e-129 467.2 320 76.2
GSVIVG01024009001 Vitis vinifera HOM05D005026 ORTHO05D005981 2.1e-127 459.5 321 75.4
Atru.chr5.3373 Acer truncatum HOM05D005026 ORTHO05D005981 5.7e-125 451.4 320 72.8
Thecc.02G058400 Theobroma cacao HOM05D005026 ORTHO05D005981 2.1e-124 449.5 320 73.4
Ciclev10028903m.g Citrus clementina HOM05D005026 ORTHO05D005981 9.0e-123 444.1 318 73.3
PSO782G1462 Papaver somniferum HOM05D005026 ORTHO05D005981 5.8e-122 441.4 320 73.8
Gohir.A04G131300 Gossypium hirsutum HOM05D005026 ORTHO05D005981 7.6e-122 441.0 320 71.2
CSS0005811 Camellia sinensis var. sinensis HOM05D005026 ORTHO05D005981 1.0e-121 440.7 323 72.4
Gohir.D04G167700 Gossypium hirsutum HOM05D005026 ORTHO05D005981 1.0e-121 440.7 320 71.2
Gorai.012G156000 Gossypium raimondii HOM05D005026 ORTHO05D005981 1.0e-121 440.7 320 71.2
COL.COLO4_17353 Corchorus olitorius HOM05D005026 ORTHO05D005981 2.2e-121 439.5 321 73.2
ClCG02G011990 Citrullus lanatus HOM05D005026 ORTHO05D005981 5.0e-121 438.3 327 71.3
Gohir.D01G160600 Gossypium hirsutum HOM05D005026 ORTHO05D005981 3.2e-120 435.6 320 72.8
Gorai.002G199000 Gossypium raimondii HOM05D005026 ORTHO05D005981 3.2e-120 435.6 320 72.8
PGR142G1000 Punica granatum HOM05D005026 ORTHO05D005981 3.2e-120 435.6 320 71.2
PSO063G0001 Papaver somniferum HOM05D005026 ORTHO05D005981 4.2e-120 435.3 320 73.1
Gohir.A01G169500 Gossypium hirsutum HOM05D005026 ORTHO05D005981 2.1e-119 433.0 320 72.8
CsaV3_2G016150 Cucumis sativus L. HOM05D005026 ORTHO05D005981 6.1e-119 431.4 320 70.9
MELO3C020824.2 Cucumis melo HOM05D005026 ORTHO05D005981 3.9e-118 428.7 320 70.0
CAN.G216.1 Capsicum annuum HOM05D005026 ORTHO05D005981 5.1e-118 428.3 323 71.2
Sed0021554 Sechium edule HOM05D005026 ORTHO05D005981 6.7e-118 427.9 320 70.6
Sopen10g025430 Solanum pennellii HOM05D005026 ORTHO05D005981 6.7e-118 427.9 323 69.7
PGSC0003DMG400026715 Solanum tuberosum HOM05D005026 ORTHO05D005981 6.7e-118 427.9 323 69.7
Solyc10g055640.2 Solanum lycopersicum HOM05D005026 ORTHO05D005981 8.7e-118 427.6 323 69.7
Eucgr.I01430 Eucalyptus grandis HOM05D005026 ORTHO05D005981 1.1e-117 427.2 322 71.7
Actinidia21465 Actinidia chinensis HOM05D005026 ORTHO05D005981 1.9e-117 426.4 323 70.6
vmacro17340 Vaccinium macrocarpon HOM05D005026 ORTHO05D005981 1.9e-117 426.4 321 70.4
Potri.004G176200 Populus trichocarpa HOM05D005026 ORTHO05D005981 3.3e-117 425.6 321 70.1
Peaxi162Scf00042g00232 Petunia axillaris HOM05D005026 ORTHO05D005981 5.7e-117 424.9 321 69.2
Rhsim05G0054500 Rhododendron simsii HOM05D005026 ORTHO05D005981 9.7e-117 424.1 320 70.3
Cc09_g09870 Coffea canephora HOM05D005026 ORTHO05D005981 1.6e-116 423.3 320 70.9
Nitab4.5_0005236g0010 Nicotiana tabacum HOM05D005026 ORTHO05D005981 1.6e-116 423.3 322 70.2
CANSAT78G2332 Cannabis sativa HOM05D005026 ORTHO05D005981 8.2e-116 421.0 320 69.4
Duzib132G0031 Durio zibethinus HOM05D005026 ORTHO05D005981 8.2e-116 421.0 352 65.6
ECA234G1034 Erigeron canadensis HOM05D005026 ORTHO05D005981 8.2e-116 421.0 320 70.6
Hma1.2p1_0163F.1_g072550 Hydrangea macrophylla HOM05D005026 ORTHO05D005981 8.2e-116 421.0 323 70.0
VMungo0720G0105 Vigna mungo HOM05D005026 ORTHO05D005981 1.1e-115 420.6 323 69.3
AUR62010035 Chenopodium quinoa HOM05D005026 ORTHO05D005981 2.4e-115 419.5 325 69.8
Glyma.20G107700 Glycine max HOM05D005026 ORTHO05D005981 3.1e-115 419.1 324 67.9
Glyma.10G281500 Glycine max HOM05D005026 ORTHO05D005981 4.1e-115 418.7 324 68.8
Cfa005253 Carpinus fangiana HOM05D005026 ORTHO05D005981 6.9e-115 417.9 320 70.3
Oeu032531.1 Olea europaea HOM05D005026 ORTHO05D005981 6.9e-115 417.9 320 68.8
Prupe.8G166600 Prunus persica HOM05D005026 ORTHO05D005981 6.9e-115 417.9 320 68.4
Sabra04G0118300 Salix brachista HOM05D005026 ORTHO05D005981 9.0e-115 417.5 320 69.1
FvH4_2g15441 Fragaria vesca HOM05D005026 ORTHO05D005981 1.2e-114 417.2 320 68.4
FAN24G0982 Fragaria x ananassa HOM05D005026 ORTHO05D005981 1.2e-114 417.2 320 68.4
EL10Ac9g21369 Beta vulgaris HOM05D005026 ORTHO05D005981 1.5e-114 416.8 322 69.3
CDE04G3302 Ceratophyllum demersum HOM05D005026 ORTHO05D005981 2.0e-114 416.4 323 66.9
Manes.11G096700 Manihot esculenta HOM05D005026 ORTHO05D005981 3.4e-114 415.6 323 67.5
QL11p050624 Quercus lobata HOM05D005026 ORTHO05D005981 5.9e-114 414.8 321 68.5
QL11p050879 Quercus lobata HOM05D005026 ORTHO05D005981 5.9e-114 414.8 321 68.5
Sed0002674 Sechium edule HOM05D005026 ORTHO05D005981 7.7e-114 414.5 320 68.4
Lalb_Chr02g0143411 Lupinus albus HOM05D005026 ORTHO05D005981 1.0e-113 414.1 320 68.4
Phvul.007G019200 Phaseolus vulgaris HOM05D005026 ORTHO05D005981 1.3e-113 413.7 321 67.9
CiPaw.05G083000 Carya illinoinensis HOM05D005026 ORTHO05D005981 1.7e-113 413.3 322 67.7
CARHR107140 Cardamine hirsuta HOM05D005026 ORTHO05D005981 2.2e-113 412.9 325 68.0
AUR62013023 Chenopodium quinoa HOM05D005026 ORTHO05D005981 2.2e-113 412.9 321 69.5
Lj5g0027913 Lotus japonicus HOM05D005026 ORTHO05D005981 2.2e-113 412.9 320 67.5
arahy.Tifrunner.gnm1.ann1.Y470YU Arachis hypogaea HOM05D005026 ORTHO05D005981 3.8e-113 412.1 321 67.9
Ca_11210_v3 Cicer arietinum L. HOM05D005026 ORTHO05D005981 5.0e-113 411.8 320 67.5
Sp3g30150 Schrenkiella parvula HOM05D005026 ORTHO05D005981 5.0e-113 411.8 322 68.0
arahy.Tifrunner.gnm1.ann1.UBN13B Arachis hypogaea HOM05D005026 ORTHO05D005981 6.5e-113 411.4 321 67.9
MSTRG.16919 Avicennia marina HOM05D005026 ORTHO05D005981 8.5e-113 411.0 323 68.4
Lalb_Chr06g0163661 Lupinus albus HOM05D005026 ORTHO05D005981 8.5e-113 411.0 323 67.5
HanXRQChr10g0300841 Helianthus annuus HOM05D005026 ORTHO05D005981 1.1e-112 410.6 318 69.5
TWI79G0831 Tripterygium wilfordii HOM05D005026 ORTHO05D005981 1.1e-112 410.6 320 68.8
TPR.G2421 Trifolium pratense HOM05D005026 ORTHO05D005981 1.4e-112 410.2 326 67.8
AL3G49570 Arabidopsis lyrata HOM05D005026 ORTHO05D005981 2.5e-112 409.5 321 67.9
Thhalv10022788m.g Eutrema salsugineum HOM05D005026 ORTHO05D005981 2.5e-112 409.5 322 68.0
RcHm_v2.0_Chr6g0278411 Rosa chinensis HOM05D005026 ORTHO05D005981 2.5e-112 409.5 320 67.2
FAN15G3749 Fragaria x ananassa HOM05D005026 ORTHO05D005981 4.2e-112 408.7 320 67.5
unitig_578.g16751 Utricularia gibba HOM05D005026 ORTHO05D005981 7.2e-112 407.9 320 66.9
DCAR_022946 Daucus carota HOM05D005026 ORTHO05D005981 1.2e-111 407.1 321 68.5
Lsat_1_v5_gn_4_71761 Lactuca sativa HOM05D005026 ORTHO05D005981 1.6e-111 406.8 323 68.4
Nitab4.5_0002763g0050 Nicotiana tabacum HOM05D005026 ORTHO05D005981 4.6e-111 405.2 322 68.9
Carub.0003s3066 Capsella rubella HOM05D005026 ORTHO05D005981 1.0e-110 404.1 320 66.9
A07p04280 Brassica napus HOM05D005026 ORTHO05D005981 2.3e-110 402.9 320 66.9
BraA07t28219Z Brassica rapa HOM05D005026 ORTHO05D005981 2.3e-110 402.9 320 66.9
Cpa.g.sc20.93 Carica papaya HOM05D005026 ORTHO05D005981 1.1e-109 400.6 275 78.2
AT2G16860 Arabidopsis thaliana HOM05D005026 ORTHO05D005981 3.3e-109 399.1 320 66.6
BcaB03g16411 Brassica carinata HOM05D005026 ORTHO05D005981 3.3e-109 399.1 320 66.6
Medtr1g112640 Medicago truncatula HOM05D005026 ORTHO05D005981 3.3e-109 399.1 322 67.4
Nn1g09206 Nelumbo nucifera HOM05D005026 ORTHO05D005981 9.7e-109 397.5 224 87.9
Ah.01g008260 Amaranthus hybridus HOM05D005026 ORTHO05D005981 2.2e-108 396.4 357 61.6
BcaC06g36185 Brassica carinata HOM05D005026 ORTHO05D005981 2.2e-108 396.4 320 66.6
C07p06780 Brassica napus HOM05D005026 ORTHO05D005981 2.2e-108 396.4 320 66.6
BolC7t41099H Brassica oleracea HOM05D005026 ORTHO05D005981 2.2e-108 396.4 320 66.6
THA.LOC104819652 Tarenaya hassleriana HOM05D005026 ORTHO05D005981 3.7e-108 395.6 320 66.6
Migut.N01326 Erythranthe guttata HOM05D005026 ORTHO05D005981 1.1e-107 394.0 325 64.6
MD05G1122700 Malus domestica HOM05D005026 ORTHO05D005981 3.1e-107 392.5 320 65.3
Sc18g0006400 Simmondsia chinensis HOM05D005026 ORTHO05D005981 6.9e-107 391.3 320 65.3
PGSC0003DMG400010588 Solanum tuberosum HOM05D005026 ORTHO05D005981 2.6e-106 389.4 321 64.8
Sopen07g025840 Solanum pennellii HOM05D005026 ORTHO05D005981 1.7e-105 386.7 321 64.8
SalBow1G5110 Salvia bowleyana HOM05D005026 ORTHO05D005981 2.9e-105 386.0 321 65.4
MBI02_g23401_MAGBIO Magnolia biondii HOM05D005026 ORTHO05D005981 7.2e-104 381.3 293 69.6
Haze_02129 Corylus avellana HOM05D005026 ORTHO05D005981 6.1e-103 378.3 300 68.7
CDE06G2829 Ceratophyllum demersum HOM05D005026 ORTHO05D005981 3.0e-102 375.9 309 65.4
Os06g0711600 Oryza sativa ssp. japonica HOM05D005026 ORTHO05D005981 6.7e-102 374.8 328 62.8
Zm00001eb272560 Zea mays HOM05D005026 ORTHO05D005981 4.4e-101 372.1 335 61.5
Oeu015515.5 Olea europaea HOM05D005026 ORTHO05D005981 1.1e-99 367.5 337 61.4
Mapoly0011s0013 Marchantia polymorpha HOM05D005026 ORTHO05D005981 2.4e-99 366.3 320 60.6
Ah.01g023090 Amaranthus hybridus HOM05D005026 ORTHO05D005981 3.1e-99 365.9 238 78.6
Zm00001eb227710 Zea mays HOM05D005026 ORTHO05D005981 2.0e-98 363.2 347 58.8
Lj5A178G71 Lonicera japonica HOM05D005026 ORTHO05D005981 5.9e-98 361.7 272 72.8
Pp3c18_8200 Physcomitrium patens HOM05D005026 ORTHO05D005981 8.5e-97 357.8 319 60.2
HanXRQChr10g0300791 Helianthus annuus HOM05D005026 ORTHO05D005981 4.0e-94 349.0 203 84.2
ATR0665G437 Amborella trichopoda HOM05D005026 ORTHO05D005981 5.2e-94 348.6 207 84.1
Actinidia28532 Actinidia chinensis HOM05D005026 ORTHO05D005981 1.1e-91 340.9 252 71.8
Sc14g0002280 Simmondsia chinensis HOM05D005026 ORTHO05D005981 7.2e-88 328.2 324 58.3
SMO143G0164 Selaginella moellendorffii HOM05D005026 ORTHO05D005981 4.7e-87 325.5 321 57.3
FAN20G3067 Fragaria x ananassa HOM05D005026 ORTHO05D005981 2.2e-84 316.6 275 62.2
Ciclev10023429m.g Citrus clementina HOM05D005026 ORTHO05D005981 3.1e-83 312.8 288 57.6
RcHm_v2.0_Chr1g0323251 Rosa chinensis HOM05D005026 ORTHO05D005981 5.9e-82 308.5 323 55.1
Sed0003938 Sechium edule HOM05D005026 ORTHO05D005981 7.7e-82 308.1 320 54.7
HanXRQChr05g0128751 Helianthus annuus HOM05D005026 ORTHO05D005981 7.2e-80 301.6 185 80.5
CAN.G641.54 Capsicum annuum HOM05D005026 ORTHO05D005981 5.7e-69 265.4 181 75.1
CBR_g18651 Chara braunii HOM05D005026 ORTHO05D005981 4.1e-67 259.2 416 43.3
Sopen08g021400 Solanum pennellii HOM05D005026 ORTHO05D005981 2.0e-66 256.9 229 63.3
Aa31LG8G14070 Aethionema arabicum HOM05D005026 ORTHO05D005981 3.3e-64 249.6 294 50.0
Solyc08g067460.1 Solanum lycopersicum HOM05D005026 ORTHO05D005981 2.9e-60 236.5 191 69.6
Peaxi162Scf00042g02315 Petunia axillaris HOM05D005026 ORTHO05D005981 1.0e-57 228.0 385 40.3
Duzib052G0155 Durio zibethinus HOM05D005026 ORTHO05D005981 1.5e-48 197.6 116 85.3
Cre01.g037400 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D005981 9.5e-48 194.9 224 48.7
Solyc07g052200.1 Solanum lycopersicum HOM05D005026 ORTHO05D005981 1.2e-47 194.5 321 42.1
HanXRQChr10g0300831 Helianthus annuus HOM05D005026 ORTHO05D005981 9.2e-43 178.3 278 46.0
MCO14G518 Micromonas commoda HOM05D000144 ORTHO05D005981 2.3e-41 173.7 272 40.8
Psat0s3098g0080 Pisum sativum HOM05D005026 ORTHO05D005981 2.5e-40 170.2 198 51.0
TAR624G0954 Trochodendron aralioides HOM05D005026 ORTHO05D005981 2.5e-40 170.2 95 89.5
AagrBONN_evm.TU.Sc2ySwM_344.1326 Anthoceros agrestis HOM05D005026 ORTHO05D005981 6.9e-38 162.2 204 45.6
HPP92_003763 Vanilla planifolia HOM05D005026 ORTHO05D005981 1.3e-36 157.9 119 68.9
HPP92_021456 Vanilla planifolia HOM05D005026 ORTHO05D005981 4.9e-36 156.0 122 68.9
BcaB03g16410 Brassica carinata HOM05D005026 ORTHO05D005981 6.4e-36 155.6 96 83.3
CSS0001365 Camellia sinensis var. sinensis HOM05D005026 ORTHO05D005981 1.9e-35 154.1 126 67.5
CSS0005878 Camellia sinensis var. sinensis HOM05D005026 ORTHO05D005981 1.9e-35 154.1 126 67.5
PGSC0003DMG400010589 Solanum tuberosum HOM05D005026 ORTHO05D005981 7.1e-35 152.1 224 45.1
Actinidia00627 Actinidia chinensis HOM05D005026 ORTHO05D005981 1.0e-33 148.3 93 81.7
PGSC0003DMG400028947 Solanum tuberosum HOM05D005026 ORTHO05D005981 2.2e-28 130.6 80 80.0
RcHm_v2.0_Chr2g0134101 Rosa chinensis HOM05D005026 ORTHO05D005981 2.1e-26 124.0 199 40.7
PRCOL_00006468 Prasinoderma coloniale HOM05D000144 ORTHO05D334079 3.0e-25 120.2 231 39.4
HPP92_021472 Vanilla planifolia HOM05D005026 ORTHO05D005981 1.1e-24 118.2 95 68.4
RcHm_v2.0_Chr6g0295751 Rosa chinensis HOM05D005026 ORTHO05D005981 8.4e-20 102.1 147 45.6
TAR624G1238 Trochodendron aralioides HOM05D005026 ORTHO05D005981 2.4e-19 100.5 111 56.8
TAR624G0203 Trochodendron aralioides HOM05D005026 ORTHO05D005981 2.1e-18 97.4 63 82.5
Nn1g09215 Nelumbo nucifera HOM05D005026 ORTHO05D005981 1.1e-08 65.1 43 67.4
MBI18_g05076_MAGBIO Magnolia biondii HOM05D005026 ORTHO05D005981 7.4e-08 62.4 43 72.1
Pp3c21_12130 Physcomitrium patens HOM05D005026 ORTHO05D005981 3.7e-07 60.1 60 58.3
Psat6g231960 Pisum sativum HOM05D005026 ORTHO05D005981 4.8e-07 59.7 134 35.1
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.4e-06 57.4 40 57.5
Dinv14115 Davidia involucrata HOM05D005026 ORTHO05D005981 3.1e-06 57.0 38 68.4
Rhsim10G0139600 Rhododendron simsii HOM05D000038 ORTHO05D000143 6.9e-06 55.8 57 57.9
Duzib248G0175 Durio zibethinus HOM05D002972 ORTHO05D002272 9.0e-06 55.5 76 43.4


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