Gene: COL.COLO4_17353
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_17353
- Transcript Identifier COL.rna16117
- Gene Type Coding gene
- Location AWUE01016331.1 : 62158-63807 : negative
Gene Family Information
- ID HOM05D005026
- #Genes/#Species 148/93
- Phylogenetic origin
- ID ORTHO05D005981
- #Genes/#Species 149/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna16117
- GenBank OMO92759.1
- id gene17325
- gene_name COLO4_17353
- uniprot A0A1R3JD62
Descriptions
- Description mRNA splicing factor SYF2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0008380 | IEA | GOA Database | RNA splicing | |
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005681 | IEA | GOA Database | spliceosomal complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013260 | mRNA splicing factor SYF2 |
| Mapman id | Description |
|---|---|
| 16.2.5.2.7 | RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component SYF2 |