Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00178 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 1.4e-150 536.2 250 100.0
GSVIVG01016752001 Vitis vinifera HOM05D005330 ORTHO05D006489 2.1e-50 203.4 228 47.4
AUR62001479 Chenopodium quinoa HOM05D005330 ORTHO05D006489 7.9e-50 201.4 243 43.6
Eucgr.F04419 Eucalyptus grandis HOM05D005330 ORTHO05D006489 1.0e-49 201.1 225 46.7
Dinv20432 Davidia involucrata HOM05D005330 ORTHO05D006489 6.7e-49 198.4 226 45.6
Thecc.06G120800 Theobroma cacao HOM05D005330 ORTHO05D006489 8.7e-49 198.0 236 44.5
Solyc12g049330.2 Solanum lycopersicum HOM05D005330 ORTHO05D006489 3.3e-48 196.1 226 46.5
Rhsim08G0239400 Rhododendron simsii HOM05D005330 ORTHO05D006489 7.4e-48 194.9 232 42.7
EL10Ac7g16412 Beta vulgaris HOM05D005330 ORTHO05D006489 9.7e-48 194.5 234 44.0
Sopen12g023810 Solanum pennellii HOM05D005330 ORTHO05D006489 9.7e-48 194.5 226 46.0
ECA234G4612 Erigeron canadensis HOM05D005330 ORTHO05D006489 2.2e-47 193.4 251 39.4
Phvul.010G129300 Phaseolus vulgaris HOM05D005330 ORTHO05D006489 6.3e-47 191.8 229 44.1
Hund05737 Selenicereus undatus HOM05D005330 ORTHO05D006489 6.3e-47 191.8 234 44.0
PGSC0003DMG400014100 Solanum tuberosum HOM05D005330 ORTHO05D006489 6.3e-47 191.8 229 44.5
PGR119G1300 Punica granatum HOM05D005330 ORTHO05D006489 8.2e-47 191.4 232 41.4
Gohir.A10G053500 Gossypium hirsutum HOM05D005330 ORTHO05D006489 1.1e-46 191.0 239 41.4
Gohir.D10G055300 Gossypium hirsutum HOM05D005330 ORTHO05D006489 1.1e-46 191.0 236 41.9
Gorai.011G059000 Gossypium raimondii HOM05D005330 ORTHO05D006489 1.1e-46 191.0 236 41.9
Aqoxy2G00145 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 1.4e-46 190.7 235 44.7
Glyma.16G008300 Glycine max HOM05D005330 ORTHO05D006489 1.4e-46 190.7 229 44.5
Manes.11G019800 Manihot esculenta HOM05D005330 ORTHO05D006489 4.1e-46 189.1 229 43.7
Prupe.3G040200 Prunus persica HOM05D005330 ORTHO05D006489 4.1e-46 189.1 238 45.0
CAN.G1455.4 Capsicum annuum HOM05D005330 ORTHO05D006489 6.9e-46 188.3 229 42.4
Potri.003G065500 Populus trichocarpa HOM05D005330 ORTHO05D006489 6.9e-46 188.3 229 44.1
Lalb_Chr04g0263541 Lupinus albus HOM05D005330 ORTHO05D006489 1.2e-45 187.6 227 42.7
MD09G1182600 Malus domestica HOM05D005330 ORTHO05D006489 1.5e-45 187.2 230 44.8
Atru.chr1.3994 Acer truncatum HOM05D005330 ORTHO05D006489 2.0e-45 186.8 214 44.9
Ah.08g216810 Amaranthus hybridus HOM05D005330 ORTHO05D006489 2.0e-45 186.8 239 42.3
Sc10g0007910 Simmondsia chinensis HOM05D005330 ORTHO05D006489 2.6e-45 186.4 226 44.2
Nitab4.5_0001199g0030 Nicotiana tabacum HOM05D005330 ORTHO05D006489 3.4e-45 186.0 229 43.2
Sabra03G0038500 Salix brachista HOM05D005330 ORTHO05D006489 4.5e-45 185.7 227 43.6
Cpa.g.sc25.125 Carica papaya HOM05D005330 ORTHO05D006489 5.9e-45 185.3 229 42.4
Psat0s741g0240 Pisum sativum HOM05D005330 ORTHO05D006489 5.9e-45 185.3 227 42.3
CiPaw.01G218300 Carya illinoinensis HOM05D005330 ORTHO05D006489 7.7e-45 184.9 223 43.5
TAR624G1001 Trochodendron aralioides HOM05D005330 ORTHO05D006489 7.7e-45 184.9 234 42.7
Nn6g34611 Nelumbo nucifera HOM05D005330 ORTHO05D006489 1.0e-44 184.5 245 42.0
SalBow6G0331 Salvia bowleyana HOM05D005330 ORTHO05D006489 1.3e-44 184.1 231 39.8
VMungo0331G1542 Vigna mungo HOM05D005330 ORTHO05D006489 1.3e-44 184.1 230 43.9
SalBow6G0719 Salvia bowleyana HOM05D005330 ORTHO05D006489 1.7e-44 183.7 231 39.8
Nitab4.5_0000189g0150 Nicotiana tabacum HOM05D005330 ORTHO05D006489 2.9e-44 183.0 229 42.4
TWI79G1442 Tripterygium wilfordii HOM05D005330 ORTHO05D006489 5.0e-44 182.2 222 42.3
vmacro15037 Vaccinium macrocarpon HOM05D005330 ORTHO05D006489 5.0e-44 182.2 228 41.7
CARHR044500 Cardamine hirsuta HOM05D005330 ORTHO05D006489 6.5e-44 181.8 223 40.8
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 6.5e-44 181.8 226 41.2
Hund18689 Selenicereus undatus HOM05D005330 ORTHO05D006489 1.9e-43 180.3 233 41.2
Actinidia32189 Actinidia chinensis HOM05D005330 ORTHO05D006489 2.5e-43 179.9 222 41.4
AUR62009886 Chenopodium quinoa HOM05D005330 ORTHO05D006489 2.5e-43 179.9 236 41.9
MD09G1182800 Malus domestica HOM05D005330 ORTHO05D006489 2.5e-43 179.9 226 42.5
Cc04_g01320 Coffea canephora HOM05D005330 ORTHO05D006489 3.2e-43 179.5 229 40.2
Lj3g0015373 Lotus japonicus HOM05D005330 ORTHO05D006489 7.2e-43 178.3 230 42.6
Glyma.18G149800 Glycine max HOM05D005330 ORTHO05D006489 9.4e-43 177.9 229 43.2
TAR624G0147 Trochodendron aralioides HOM05D005330 ORTHO05D006489 1.2e-42 177.6 229 40.6
Potri.001G168700 Populus trichocarpa HOM05D005330 ORTHO05D006489 6.1e-42 175.3 226 40.7
DCAR_022693 Daucus carota HOM05D005330 ORTHO05D006489 7.9e-42 174.9 226 42.0
TWI31G1192 Tripterygium wilfordii HOM05D005330 ORTHO05D006489 7.9e-42 174.9 222 41.9
Lj5A36G79 Lonicera japonica HOM05D005330 ORTHO05D006489 1.0e-41 174.5 226 40.7
QL05p004250 Quercus lobata HOM05D005330 ORTHO05D006489 1.0e-41 174.5 226 40.7
BcaB04g17020 Brassica carinata HOM05D005330 ORTHO05D006489 1.4e-41 174.1 224 39.7
Oeu015485.2 Olea europaea HOM05D005330 ORTHO05D006489 1.4e-41 174.1 225 40.9
BraA08t32169Z Brassica rapa HOM05D005330 ORTHO05D006489 2.3e-41 173.3 228 38.6
Ciclev10025803m.g Citrus clementina HOM05D005330 ORTHO05D006489 2.3e-41 173.3 226 41.2
Sp1g40600 Schrenkiella parvula HOM05D005330 ORTHO05D006489 2.3e-41 173.3 223 40.4
Carub.0001s4339 Capsella rubella HOM05D005330 ORTHO05D006489 3.0e-41 172.9 223 39.5
Hma1.2p1_0686F.1_g203410 Hydrangea macrophylla HOM05D005330 ORTHO05D006489 3.0e-41 172.9 217 44.7
MD09G1182700 Malus domestica HOM05D005330 ORTHO05D006489 5.1e-41 172.2 225 41.3
THA.LOC104810366 Tarenaya hassleriana HOM05D005330 ORTHO05D006489 5.1e-41 172.2 223 40.4
Lsat_1_v5_gn_5_136241 Lactuca sativa HOM05D005330 ORTHO05D006489 6.7e-41 171.8 230 40.0
Medtr8g020850 Medicago truncatula HOM05D005330 ORTHO05D006489 6.7e-41 171.8 230 38.7
Sed0005660 Sechium edule HOM05D005330 ORTHO05D006489 6.7e-41 171.8 238 40.8
AL1G62870 Arabidopsis lyrata HOM05D005330 ORTHO05D006489 1.1e-40 171.0 220 40.9
A08p01180 Brassica napus HOM05D005330 ORTHO05D006489 1.1e-40 171.0 229 37.6
C03p92030 Brassica napus HOM05D005330 ORTHO05D006489 1.1e-40 171.0 225 38.7
Cfa003530 Carpinus fangiana HOM05D005330 ORTHO05D006489 2.6e-40 169.9 227 41.0
Atru.chr1.3993 Acer truncatum HOM05D005330 ORTHO05D006489 3.3e-40 169.5 260 40.0
Ca_23387_v3 Cicer arietinum L. HOM05D005330 ORTHO05D006489 3.3e-40 169.5 229 40.2
HanXRQChr12g0360301 Helianthus annuus HOM05D005330 ORTHO05D006489 3.3e-40 169.5 243 39.9
HanXRQChr12g0360351 Helianthus annuus HOM05D005330 ORTHO05D006489 3.3e-40 169.5 243 39.9
Hma1.2p1_0291F.1_g115070 Hydrangea macrophylla HOM05D005330 ORTHO05D006489 3.3e-40 169.5 217 39.2
ATR0598G333 Amborella trichopoda HOM05D005330 ORTHO05D006489 4.4e-40 169.1 242 40.9
AT1G54150 Arabidopsis thaliana HOM05D005330 ORTHO05D006489 7.4e-40 168.3 234 39.7
BcaC01g01438 Brassica carinata HOM05D005330 ORTHO05D006489 7.4e-40 168.3 225 38.2
BolC3t21521H Brassica oleracea HOM05D005330 ORTHO05D006489 7.4e-40 168.3 225 38.2
ClCG09G000970 Citrullus lanatus HOM05D005330 ORTHO05D006489 7.4e-40 168.3 261 39.5
SGA_v2.0_scaffold122G33335 Striga asiatica HOM05D005330 ORTHO05D006489 7.4e-40 168.3 227 40.1
BcaC08g43595 Brassica carinata HOM05D005330 ORTHO05D006489 9.7e-40 167.9 228 38.2
C06p09930 Brassica napus HOM05D005330 ORTHO05D006489 9.7e-40 167.9 228 38.2
BolC6t36066H Brassica oleracea HOM05D005330 ORTHO05D006489 9.7e-40 167.9 228 38.2
SEGI_21309 Sequoiadendron giganteum HOM05D005330 ORTHO05D006489 9.7e-40 167.9 231 41.1
A06p00510 Brassica napus HOM05D005330 ORTHO05D006489 1.3e-39 167.5 228 38.2
BraA06t23266Z Brassica rapa HOM05D005330 ORTHO05D006489 1.3e-39 167.5 228 38.2
HPP92_013292 Vanilla planifolia HOM05D005330 ORTHO05D006489 4.8e-39 165.6 236 38.6
BcaB07g33256 Brassica carinata HOM05D005330 ORTHO05D006489 8.2e-39 164.9 229 37.6
Sed0026793 Sechium edule HOM05D005330 ORTHO05D006489 1.1e-38 164.5 242 37.6
Aa31LG10G1260 Aethionema arabicum HOM05D005330 ORTHO05D006489 1.4e-38 164.1 222 38.3
Migut.I01076 Erythranthe guttata HOM05D005330 ORTHO05D006489 1.4e-38 164.1 221 38.5
Thhalv10011564m.g Eutrema salsugineum HOM05D005330 ORTHO05D006489 1.4e-38 164.1 223 38.1
RcHm_v2.0_Chr2g0145651 Rosa chinensis HOM05D005330 ORTHO05D006489 2.4e-38 163.3 232 39.2
HanXRQChr12g0360331 Helianthus annuus HOM05D005330 ORTHO05D006489 5.3e-38 162.2 232 38.8
PSO135G0621 Papaver somniferum HOM05D005330 ORTHO05D006489 1.2e-37 161.0 235 37.4
PSO724G1321 Papaver somniferum HOM05D005330 ORTHO05D006489 5.9e-37 158.7 235 36.6
CDE05G1829 Ceratophyllum demersum HOM05D005330 ORTHO05D006489 1.1e-35 154.5 224 38.8
Haze_16035 Corylus avellana HOM05D005330 ORTHO05D006489 1.1e-35 154.5 262 35.9
DCAR_016124 Daucus carota HOM05D005330 ORTHO05D006489 7.2e-35 151.8 223 35.4
SMO118G0169 Selaginella moellendorffii HOM05D005330 ORTHO05D006489 1.6e-34 150.6 232 37.5
Peaxi162Scf00177g00417 Petunia axillaris HOM05D005330 ORTHO05D006489 2.7e-34 149.8 208 39.9
COL.COLO4_30752 Corchorus olitorius HOM05D005330 ORTHO05D006489 3.6e-34 149.4 249 33.7
PSO724G1224 Papaver somniferum HOM05D005330 ORTHO05D006489 7.9e-34 148.3 199 41.2
Pp3c13_6970 Physcomitrium patens HOM05D005330 ORTHO05D006489 1.4e-33 147.5 259 34.0
MD02G1089500 Malus domestica HOM05D005330 ORTHO05D006489 1.8e-33 147.1 218 38.1
FvH4_6g34790 Fragaria vesca HOM05D005330 ORTHO05D006489 6.7e-33 145.2 237 36.7
FAN05G5341 Fragaria x ananassa HOM05D005330 ORTHO05D006489 6.7e-33 145.2 237 36.7
Zm00001eb401910 Zea mays HOM05D005330 ORTHO05D006489 3.3e-32 142.9 234 36.3
PSO135G0922 Papaver somniferum HOM05D005330 ORTHO05D006489 4.4e-32 142.5 241 34.4
SGA_v2.0_scaffold71G23853 Striga asiatica HOM05D005330 ORTHO05D006489 7.4e-32 141.7 264 31.8
Duzib160G0528 Durio zibethinus HOM05D005330 ORTHO05D006489 4.8e-31 139.0 236 35.6
AagrBONN_evm.TU.Sc2ySwM_228.1646 Anthoceros agrestis HOM05D005330 ORTHO05D006489 5.3e-30 135.6 208 36.5
arahy.Tifrunner.gnm1.ann1.K577WU Arachis hypogaea HOM05D005330 ORTHO05D006489 1.6e-29 134.0 145 47.6
arahy.Tifrunner.gnm1.ann1.RX87J0 Arachis hypogaea HOM05D005330 ORTHO05D006489 1.6e-29 134.0 145 47.6
Os03g0177300 Oryza sativa ssp. japonica HOM05D005330 ORTHO05D006489 3.5e-29 132.9 211 37.4
Mapoly0002s0144 Marchantia polymorpha HOM05D005330 ORTHO05D006489 1.0e-28 131.3 219 36.1
CAN.G1080.1 Capsicum annuum HOM05D005330 ORTHO05D006489 5.0e-28 129.0 229 34.1
PSO135G0120 Papaver somniferum HOM05D005330 ORTHO05D006489 1.5e-27 127.5 236 33.1
Glyma.03G080300 Glycine max HOM05D005330 ORTHO05D006489 9.4e-27 124.8 220 36.4
MELO3C024354.2 Cucumis melo HOM05D005330 ORTHO05D006489 2.1e-26 123.6 156 43.6
Pp3c16_12380 Physcomitrium patens HOM05D005330 ORTHO05D006489 1.0e-25 121.3 228 34.2
CsaV3_7G034470 Cucumis sativus L. HOM05D005330 ORTHO05D006489 1.8e-25 120.6 154 42.9
Aqoxy3G00203 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 1.6e-21 107.5 173 41.0
Actinidia21790 Actinidia chinensis HOM05D005330 ORTHO05D006489 2.9e-20 103.2 128 38.3
CSS0027574 Camellia sinensis var. sinensis HOM05D005330 ORTHO05D006489 4.0e-17 92.8 135 38.5
CSS0046024 Camellia sinensis var. sinensis HOM05D005330 ORTHO05D006489 2.0e-16 90.5 102 47.1
Lsat_1_v5_gn_5_136301 Lactuca sativa HOM05D005330 ORTHO05D006489 4.4e-16 89.4 169 33.7
CBR_g17139 Chara braunii HOM05D005330 ORTHO05D006489 5.7e-16 89.0 226 27.0
Dinv20433 Davidia involucrata HOM05D005330 ORTHO05D006489 2.3e-09 67.0 126 38.9
Eucgr.I00478 Eucalyptus grandis HOM05D005330 ORTHO05D006489 9.8e-08 61.6 107 33.6


User provided reference genes

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