Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03457 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 3.0e-44 181.4 89 100.0
GSVIVG01036653001 Vitis vinifera HOM05D004569 ORTHO05D005333 2.1e-29 132.1 83 74.7
Nn1g01867 Nelumbo nucifera HOM05D004569 ORTHO05D005333 8.0e-29 130.2 83 72.3
Duzib052G0452 Durio zibethinus HOM05D004569 ORTHO05D005333 1.8e-28 129.0 83 72.3
TAR365G0299 Trochodendron aralioides HOM05D004569 ORTHO05D005333 2.3e-28 128.6 83 72.3
Aqoxy5G00407 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 3.0e-28 128.3 83 73.5
Thecc.04G238000 Theobroma cacao HOM05D004569 ORTHO05D005333 5.2e-28 127.5 83 71.1
Gohir.A02G034100 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.5e-27 125.9 83 69.9
Duzib052G0972 Durio zibethinus HOM05D004569 ORTHO05D005333 4.4e-27 124.4 83 69.9
Ciclev10006087m.g Citrus clementina HOM05D004569 ORTHO05D005333 7.5e-27 123.6 83 69.9
Peaxi162Scf00192g01617 Petunia axillaris HOM05D004569 ORTHO05D005333 7.5e-27 123.6 83 69.9
Gohir.D02G040900 Gossypium hirsutum HOM05D004569 ORTHO05D005333 9.7e-27 123.2 83 68.7
Potri.005G067600 Populus trichocarpa HOM05D004569 ORTHO05D005333 9.7e-27 123.2 83 67.5
Cfa006984 Carpinus fangiana HOM05D004569 ORTHO05D005333 1.3e-26 122.9 83 66.3
CiPaw.01G195800 Carya illinoinensis HOM05D004569 ORTHO05D005333 2.2e-26 122.1 83 66.3
Nitab4.5_0000321g0230 Nicotiana tabacum HOM05D004569 ORTHO05D005333 2.8e-26 121.7 83 68.7
Gorai.005G045300 Gossypium raimondii HOM05D004569 ORTHO05D005333 3.7e-26 121.3 77 71.4
PSO210G1425 Papaver somniferum HOM05D004569 ORTHO05D005333 3.7e-26 121.3 83 67.5
PSO832G4509 Papaver somniferum HOM05D004569 ORTHO05D005333 3.7e-26 121.3 83 67.5
Dinv07545 Davidia involucrata HOM05D004569 ORTHO05D005333 4.8e-26 120.9 83 68.7
CAN.G135.33 Capsicum annuum HOM05D004569 ORTHO05D005333 1.1e-25 119.8 83 68.7
Thhalv10005100m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 1.1e-25 119.8 83 66.3
Nitab4.5_0004412g0030 Nicotiana tabacum HOM05D004569 ORTHO05D005333 2.4e-25 118.6 83 67.5
CSS0021073 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 3.1e-25 118.2 80 68.8
Haze_03750 Corylus avellana HOM05D004569 ORTHO05D005333 4.1e-25 117.9 83 63.9
Manes.02G208200 Manihot esculenta HOM05D004569 ORTHO05D005333 4.1e-25 117.9 83 65.1
THA.LOC104827037 Tarenaya hassleriana HOM05D004569 ORTHO05D005333 7.0e-25 117.1 83 63.9
AT5G62950 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 9.1e-25 116.7 83 66.3
Lj6g0017152 Lotus japonicus HOM05D004569 ORTHO05D005333 9.1e-25 116.7 83 66.3
Dinv40544 Davidia involucrata HOM05D004569 ORTHO05D005333 1.6e-24 115.9 73 74.0
arahy.Tifrunner.gnm1.ann1.NDW3GA Arachis hypogaea HOM05D004569 ORTHO05D005333 2.7e-24 115.2 83 65.1
arahy.Tifrunner.gnm1.ann1.SFA2KC Arachis hypogaea HOM05D004569 ORTHO05D005333 2.7e-24 115.2 83 65.1
Sabra05G0055500 Salix brachista HOM05D004569 ORTHO05D005333 2.7e-24 115.2 78 66.7
Hund09493 Selenicereus undatus HOM05D004569 ORTHO05D005333 2.7e-24 115.2 83 63.9
CARHR276760 Cardamine hirsuta HOM05D004569 ORTHO05D005333 4.5e-24 114.4 83 62.7
VMungo1383G1439 Vigna mungo HOM05D004569 ORTHO05D005333 4.5e-24 114.4 83 63.9
CANSAT78G0168 Cannabis sativa HOM05D004569 ORTHO05D005333 5.9e-24 114.0 83 60.2
ClCG06G006470 Citrullus lanatus HOM05D004569 ORTHO05D005333 5.9e-24 114.0 83 63.9
Atru.chr4.2374 Acer truncatum HOM05D004569 ORTHO05D005333 7.7e-24 113.6 83 66.3
Atru.chr4.2398 Acer truncatum HOM05D004569 ORTHO05D005333 7.7e-24 113.6 83 66.3
Aa31LG11G680 Aethionema arabicum HOM05D004569 ORTHO05D005333 7.7e-24 113.6 83 63.9
Carub.0004s0755 Capsella rubella HOM05D004569 ORTHO05D005333 7.7e-24 113.6 83 63.9
Carub.0008s2366 Capsella rubella HOM05D004569 ORTHO05D005333 1.0e-23 113.2 83 63.9
HanXRQChr06g0173001 Helianthus annuus HOM05D004569 ORTHO05D005333 1.0e-23 113.2 83 62.7
Lalb_Chr06g0161741 Lupinus albus HOM05D004569 ORTHO05D005333 1.0e-23 113.2 83 62.7
Rhsim01G0189100 Rhododendron simsii HOM05D004569 ORTHO05D005333 1.0e-23 113.2 83 65.1
AL3G51140 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 1.3e-23 112.8 83 62.7
AL8G39970 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 1.3e-23 112.8 83 62.7
Peaxi162Scf00904g00217 Petunia axillaris HOM05D004569 ORTHO05D005333 1.3e-23 112.8 81 63.0
CSS0011446 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.7e-23 112.5 81 64.2
Glyma.11G217000 Glycine max HOM05D004569 ORTHO05D005333 2.9e-23 111.7 83 62.7
Glyma.18G039600 Glycine max HOM05D004569 ORTHO05D005333 3.8e-23 111.3 83 63.9
TWI63G1720 Tripterygium wilfordii HOM05D004569 ORTHO05D005333 3.8e-23 111.3 82 63.4
Phvul.001G230900 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 1.1e-22 109.8 82 62.2
Ca_17658_v3 Cicer arietinum L. HOM05D004569 ORTHO05D005333 1.5e-22 109.4 83 60.2
Thhalv10000370m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 1.5e-22 109.4 83 62.7
HanXRQChr05g0158611 Helianthus annuus HOM05D004569 ORTHO05D005333 1.5e-22 109.4 83 63.9
AUR62028629 Chenopodium quinoa HOM05D004569 ORTHO05D005333 2.5e-22 108.6 82 63.4
SalBow2G1663 Salvia bowleyana HOM05D004569 ORTHO05D005333 2.5e-22 108.6 83 61.4
Sp2g26090 Schrenkiella parvula HOM05D004569 ORTHO05D005333 2.5e-22 108.6 81 60.5
Dinv07599 Davidia involucrata HOM05D004569 ORTHO05D005333 3.2e-22 108.2 75 69.3
SalBow1G3047 Salvia bowleyana HOM05D004569 ORTHO05D005333 3.2e-22 108.2 82 62.2
VMungo1383G2501 Vigna mungo HOM05D004569 ORTHO05D005333 3.2e-22 108.2 82 61.0
Oeu042815.1 Olea europaea HOM05D004569 ORTHO05D005333 4.2e-22 107.8 83 63.9
ECA246G0155 Erigeron canadensis HOM05D004569 ORTHO05D005333 5.5e-22 107.5 83 61.4
vmacro17995 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 7.2e-22 107.1 73 67.1
MELO3C014285.2 Cucumis melo HOM05D004569 ORTHO05D005333 9.4e-22 106.7 83 57.8
CsaV3_2G013430 Cucumis sativus L. HOM05D004569 ORTHO05D005333 9.4e-22 106.7 83 57.8
SalBow8G0974 Salvia bowleyana HOM05D004569 ORTHO05D005333 9.4e-22 106.7 83 60.2
Cc03_g04240 Coffea canephora HOM05D004569 ORTHO05D005333 3.6e-21 104.8 83 61.4
Rhsim04G0197700 Rhododendron simsii HOM05D004569 ORTHO05D005333 3.6e-21 104.8 83 63.9
Sc19g0003960 Simmondsia chinensis HOM05D004569 ORTHO05D005333 4.7e-21 104.4 83 59.0
BcaC04g23378 Brassica carinata HOM05D004569 ORTHO05D005333 8.0e-21 103.6 80 61.2
C09p08990 Brassica napus HOM05D004569 ORTHO05D005333 8.0e-21 103.6 80 62.5
BolC9t53811H Brassica oleracea HOM05D004569 ORTHO05D005333 8.0e-21 103.6 80 62.5
Hma1.2p1_0602F.1_g187570 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 8.0e-21 103.6 77 62.3
PGR031G3247 Punica granatum HOM05D004569 ORTHO05D005333 8.0e-21 103.6 83 57.8
Psat3g163880 Pisum sativum HOM05D004569 ORTHO05D005333 1.4e-20 102.8 83 54.2
BcaB04g19957 Brassica carinata HOM05D004569 ORTHO05D005333 3.0e-20 101.7 82 61.0
Sopen11g003670 Solanum pennellii HOM05D004569 ORTHO05D005333 3.0e-20 101.7 99 54.5
MD13G1198900 Malus domestica HOM05D004569 ORTHO05D005333 4.0e-20 101.3 82 51.2
A09p07940 Brassica napus HOM05D004569 ORTHO05D005333 6.8e-20 100.5 84 60.7
SGA_v2.0_scaffold45G17132 Striga asiatica HOM05D004044 ORTHO05D005333 6.8e-20 100.5 81 59.3
CSS0049273 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 8.8e-20 100.1 81 60.5
Lj5g0008299 Lotus japonicus HOM05D004569 ORTHO05D005333 8.8e-20 100.1 82 57.3
Os12g0488800 Oryza sativa ssp. japonica HOM05D004569 ORTHO05D005333 1.2e-19 99.8 82 57.3
PGSC0003DMG400027326 Solanum tuberosum HOM05D004569 ORTHO05D005333 1.2e-19 99.8 72 66.7
PGR004G1818 Punica granatum HOM05D004569 ORTHO05D005333 1.5e-19 99.4 83 54.2
Sed0021164 Sechium edule HOM05D004569 ORTHO05D005333 1.5e-19 99.4 83 57.8
Ah.02g110960 Amaranthus hybridus HOM05D000936 ORTHO05D001411 2.0e-19 99.0 79 60.8
Psat3g162000 Pisum sativum HOM05D004569 ORTHO05D005333 2.0e-19 99.0 83 53.0
BraA09t36445Z Brassica rapa HOM05D004569 ORTHO05D005333 2.6e-19 98.6 82 61.0
Medtr6g045613 Medicago truncatula HOM05D004569 ORTHO05D005333 2.6e-19 98.6 83 51.8
Medtr7g034585 Medicago truncatula HOM05D004569 ORTHO05D005333 2.6e-19 98.6 83 51.8
BcaB07g29675 Brassica carinata HOM05D004569 ORTHO05D005333 3.4e-19 98.2 81 55.6
Oeu058961.1 Olea europaea HOM05D004569 ORTHO05D005333 3.4e-19 98.2 83 57.8
Nitab4.5_0004743g0130 Nicotiana tabacum HOM05D004569 ORTHO05D005333 4.4e-19 97.8 83 61.4
Migut.B00535 Erythranthe guttata HOM05D004569 ORTHO05D005333 5.7e-19 97.4 83 54.2
Lsat_1_v5_gn_1_12980 Lactuca sativa HOM05D004569 ORTHO05D005333 7.5e-19 97.1 83 54.2
MBI18_g09782_MAGBIO Magnolia biondii HOM05D004569 ORTHO05D005333 9.8e-19 96.7 83 54.2
BcaC03g18183 Brassica carinata HOM05D004569 ORTHO05D005333 1.3e-18 96.3 83 56.6
Lsat_1_v5_gn_6_95400 Lactuca sativa HOM05D004569 ORTHO05D005333 2.2e-18 95.5 83 53.0
C02p62490 Brassica napus HOM05D004569 ORTHO05D005333 2.8e-18 95.1 82 56.1
BolC2t12308H Brassica oleracea HOM05D004569 ORTHO05D005333 2.8e-18 95.1 82 56.1
Zm00001eb076250 Zea mays HOM05D004569 ORTHO05D005333 3.7e-18 94.7 82 56.1
Zm00001eb076270 Zea mays HOM05D004569 ORTHO05D005333 3.7e-18 94.7 82 56.1
Zm00001eb076290 Zea mays HOM05D004569 ORTHO05D005333 3.7e-18 94.7 82 56.1
Zm00001eb310390 Zea mays HOM05D004569 ORTHO05D005333 3.7e-18 94.7 82 56.1
A02p42590 Brassica napus HOM05D004569 ORTHO05D005333 8.3e-18 93.6 82 54.9
BraA02t09187Z Brassica rapa HOM05D004569 ORTHO05D005333 8.3e-18 93.6 82 54.9
TPR.G14863 Trifolium pratense HOM05D004569 ORTHO05D005333 1.1e-17 93.2 80 57.5
CSS0028808 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.4e-17 92.8 67 65.7
BcaC08g46303 Brassica carinata HOM05D004569 ORTHO05D005333 3.1e-17 91.7 84 52.4
Medtr6g045603 Medicago truncatula HOM05D004569 ORTHO05D005333 4.1e-17 91.3 78 53.8
BolC6t39293H Brassica oleracea HOM05D004569 ORTHO05D005333 5.4e-17 90.9 84 51.2
CDE05G0131 Ceratophyllum demersum HOM05D004569 ORTHO05D005333 5.4e-17 90.9 87 50.6
Prupe.1G020700 Prunus persica HOM05D004569 ORTHO05D005333 7.0e-17 90.5 82 52.4
C06p41320 Brassica napus HOM05D004569 ORTHO05D005333 9.1e-17 90.1 83 51.8
AT3G28956 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 2.0e-16 89.0 62 66.1
BcaC01g02544 Brassica carinata HOM05D004569 ORTHO05D005333 2.7e-16 88.6 80 53.8
C03p63650 Brassica napus HOM05D004569 ORTHO05D005333 2.7e-16 88.6 80 53.8
BolC3t18624H Brassica oleracea HOM05D004569 ORTHO05D005333 2.7e-16 88.6 80 53.8
SGA_v2.0_scaffold353G49718 Striga asiatica HOM05D004569 ORTHO05D005333 2.7e-16 88.6 83 51.8
BcaB02g09711 Brassica carinata HOM05D004569 ORTHO05D005333 7.7e-16 87.0 78 52.6
Eucgr.H03416 Eucalyptus grandis HOM05D004569 ORTHO05D005333 2.9e-15 85.1 83 47.0
unitig_748.g7305 Utricularia gibba HOM05D004569 ORTHO05D005333 2.9e-15 85.1 80 51.2
BraA06t25922Z Brassica rapa HOM05D004569 ORTHO05D005333 5.0e-15 84.3 80 48.8
AUR62033084 Chenopodium quinoa HOM05D004569 ORTHO05D005333 6.6e-15 84.0 87 47.1
RcHm_v2.0_Chr4g0387641 Rosa chinensis HOM05D004569 ORTHO05D005333 8.6e-15 83.6 82 43.9
RcHm_v2.0_Chr6g0280701 Rosa chinensis HOM05D004569 ORTHO05D005333 8.6e-15 83.6 82 43.9
HPP92_022914 Vanilla planifolia HOM05D004569 ORTHO05D005333 1.2e-13 79.7 89 47.2
FvH4_5g27570 Fragaria vesca HOM05D004569 ORTHO05D005333 2.1e-13 79.0 82 43.9
FvH4_4g01070 Fragaria vesca HOM05D004569 ORTHO05D005333 2.8e-13 78.6 82 41.5
FAN12G4296 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.8e-13 78.6 82 41.5
GSVIVG01008529001 Vitis vinifera HOM05D004569 ORTHO05D005333 3.6e-13 78.2 52 71.2
ATR0829G086 Amborella trichopoda HOM05D004569 ORTHO05D005333 4.7e-13 77.8 80 50.0
Atru.chr5.182 Acer truncatum HOM05D004569 ORTHO05D005333 1.2e-11 73.2 67 56.7
FAN13G2556 Fragaria x ananassa HOM05D004569 ORTHO05D005333 1.7e-10 69.3 79 41.8
COL.COLO4_21559 Corchorus olitorius HOM05D004569 ORTHO05D005333 4.9e-10 67.8 52 53.8
TAR636G3114 Trochodendron aralioides HOM05D004569 ORTHO05D005333 1.1e-09 66.6 41 68.3
Mapoly0090s0037 Marchantia polymorpha HOM05D004569 ORTHO05D005333 7.0e-09 63.9 83 39.8
Pp3c21_14050 Physcomitrium patens HOM05D004569 ORTHO05D005333 7.0e-09 63.9 83 38.6
Phvul.001G219600 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 9.2e-09 63.5 46 63.0
SEGI_07191 Sequoiadendron giganteum HOM05D004569 ORTHO05D005333 9.2e-09 63.5 71 45.1
SMO343G0078 Selaginella moellendorffii HOM05D004569 ORTHO05D005333 5.9e-08 60.8 83 37.3
Lj6C645G5 Lonicera japonica HOM05D004569 ORTHO05D005333 3.9e-07 58.2 45 60.0
AagrBONN_evm.TU.Sc2ySwM_228.788 Anthoceros agrestis HOM05D004569 ORTHO05D005333 8.6e-07 57.0 82 35.4
vmacro08367 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 1.5e-06 56.2 40 65.0
CBR_g19683 Chara braunii HOM05D004569 ORTHO05D005333 1.9e-06 55.8 82 37.8
Hma1.2p1_0549F.1_g176960 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 4.3e-06 54.7 40 67.5


User provided reference genes

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