Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 2.1e-125 453.0 267 100.0
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 6.0e-120 434.9 220 96.4
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 1.3e-119 433.7 220 95.5
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 1.3e-119 433.7 220 95.5
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 1.3e-119 433.7 220 96.4
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 3.9e-119 432.2 221 94.6
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 8.7e-119 431.0 220 95.5
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 2.5e-118 429.5 220 94.5
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 4.3e-118 428.7 220 95.0
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 5.6e-118 428.3 220 94.1
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 7.4e-118 427.9 220 94.5
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 7.4e-118 427.9 220 94.5
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 7.4e-118 427.9 220 95.0
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 2.8e-117 426.0 221 92.8
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 2.8e-117 426.0 220 94.1
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 3.7e-117 425.6 221 93.2
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 4.8e-117 425.2 220 94.1
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 4.8e-117 425.2 220 94.5
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 4.8e-117 425.2 220 94.5
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 4.8e-117 425.2 220 94.5
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 6.2e-117 424.9 221 94.6
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 6.2e-117 424.9 220 93.6
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 6.2e-117 424.9 220 92.7
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 8.1e-117 424.5 221 92.8
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 8.1e-117 424.5 220 93.2
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 1.1e-116 424.1 221 93.7
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 1.1e-116 424.1 220 93.2
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 1.4e-116 423.7 221 92.8
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 2.4e-116 422.9 220 94.1
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 2.4e-116 422.9 221 92.3
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 3.1e-116 422.5 220 92.3
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 3.1e-116 422.5 220 92.3
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 4.0e-116 422.2 220 93.2
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 4.0e-116 422.2 221 92.8
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 1.2e-115 420.6 220 92.3
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 1.2e-115 420.6 220 92.3
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 1.5e-115 420.2 220 92.3
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 1.5e-115 420.2 220 91.8
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 2.0e-115 419.9 220 93.6
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 2.6e-115 419.5 223 92.8
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 3.4e-115 419.1 219 93.2
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 3.4e-115 419.1 219 93.2
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 3.4e-115 419.1 220 93.6
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 3.4e-115 419.1 220 93.2
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 3.4e-115 419.1 220 92.3
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 3.4e-115 419.1 221 91.9
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 5.8e-115 418.3 220 92.7
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 7.6e-115 417.9 220 91.8
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 7.6e-115 417.9 221 91.9
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 9.9e-115 417.5 220 92.3
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 9.9e-115 417.5 220 91.8
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 9.9e-115 417.5 229 90.8
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 9.9e-115 417.5 229 90.8
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 9.9e-115 417.5 219 92.2
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 1.3e-114 417.2 220 92.3
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 1.7e-114 416.8 217 92.6
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 2.2e-114 416.4 220 92.7
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.2e-114 416.4 232 89.7
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 2.2e-114 416.4 221 91.0
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 3.8e-114 415.6 230 89.6
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 3.8e-114 415.6 230 90.0
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 6.4e-114 414.8 221 91.4
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 6.4e-114 414.8 221 91.4
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 8.4e-114 414.5 220 91.8
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 1.1e-113 414.1 220 90.9
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 1.4e-113 413.7 220 91.4
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 1.4e-113 413.7 220 91.4
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 2.4e-113 412.9 220 90.9
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 2.4e-113 412.9 220 92.3
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 3.2e-113 412.5 220 90.9
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 3.2e-113 412.5 219 91.3
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 3.2e-113 412.5 220 92.3
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 3.2e-113 412.5 220 90.9
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 4.2e-113 412.1 220 91.4
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 5.5e-113 411.8 221 91.0
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 5.5e-113 411.8 220 91.4
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 7.1e-113 411.4 220 91.4
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 2.1e-112 409.8 220 90.5
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 3.9e-111 405.6 220 91.4
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 5.1e-111 405.2 241 85.1
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 1.1e-110 404.1 220 89.1
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 1.1e-110 404.1 209 94.7
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.5e-110 403.7 222 91.0
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.5e-110 403.7 222 91.0
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 5.6e-110 401.7 223 88.3
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 7.4e-110 401.4 220 88.6
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 7.4e-110 401.4 220 88.2
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 7.4e-110 401.4 220 88.2
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 9.6e-110 401.0 220 88.2
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 9.6e-110 401.0 220 88.2
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 2.8e-109 399.4 220 88.2
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 1.8e-108 396.7 219 89.0
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 4.0e-108 395.6 221 88.2
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 1.5e-107 393.7 220 87.3
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 5.8e-107 391.7 223 87.4
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 2.2e-106 389.8 221 85.5
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 1.9e-105 386.7 221 86.0
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 2.5e-105 386.3 288 70.1
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 7.1e-105 384.8 299 67.9
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 3.5e-104 382.5 216 85.6
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 2.3e-103 379.8 221 81.9
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 8.7e-103 377.9 208 90.9
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 2.2e-101 373.2 221 82.8
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 2.6e-99 366.3 221 82.4
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 1.1e-92 344.4 215 79.5
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 4.5e-91 339.0 181 91.7
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 3.8e-90 335.9 177 91.0
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 8.5e-90 334.7 342 55.6
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 3.3e-86 322.8 224 74.6
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 4.4e-86 322.4 217 73.7
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 9.7e-86 321.2 208 74.5
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 9.7e-78 294.7 156 92.3
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 4.5e-75 285.8 218 64.7
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 1.7e-74 283.9 213 70.9
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 8.5e-74 281.6 164 86.6
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 4.2e-73 279.3 548 36.5
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 7.2e-73 278.5 236 65.7
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 4.7e-72 275.8 221 66.1
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 1.0e-71 274.6 184 73.4
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 5.9e-67 258.8 138 91.3
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 4.0e-63 246.1 132 90.9
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.7e-58 230.7 220 57.3
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 6.8e-55 218.8 187 64.7
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 1.2e-54 218.0 113 91.2
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 3.7e-53 213.0 107 97.2
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 9.2e-52 208.4 108 94.4
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 9.2e-52 208.4 107 95.3
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.2e-51 208.0 108 91.7
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 1.6e-51 207.6 112 88.4
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 1.2e-48 198.0 106 90.6
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 3.6e-48 196.4 107 88.8
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 2.6e-46 190.3 106 88.7
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 1.4e-44 184.5 116 79.3
SMO031G0002 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 1.6e-43 181.0 92 93.5
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 5.6e-41 172.6 113 75.2
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 7.3e-41 172.2 88 92.0
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 7.3e-41 172.2 95 88.4
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.6e-40 171.0 91 86.8
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 2.8e-40 170.2 87 92.0
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 6.2e-40 169.1 95 87.4
Psat1g060480 Pisum sativum HOM05D004689 ORTHO05D006269 3.3e-33 146.7 71 97.2
Psat1g060520 Pisum sativum HOM05D004689 ORTHO05D006269 3.3e-33 146.7 71 97.2
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 4.3e-33 146.4 83 84.3
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 1.4e-28 131.3 71 84.5
Psat1g060600 Pisum sativum HOM05D004689 ORTHO05D006269 1.4e-23 114.8 58 93.1
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 7.1e-20 102.4 70 74.3
Pp3c4_2800 Physcomitrium patens HOM05D004689 ORTHO05D006269 7.8e-19 99.0 119 55.5
Psat4g215720 Pisum sativum HOM05D002324 ORTHO05D002380 9.3e-12 75.5 50 80.0
Haze_13658 Corylus avellana HOM05D004689 ORTHO05D023802 4.6e-11 73.2 40 77.5
Dinv25427 Davidia involucrata HOM05D004689 ORTHO05D182071 1.1e-09 68.6 38 86.8
Dinv44323 Davidia involucrata HOM05D004689 ORTHO05D183653 1.5e-09 68.2 38 86.8
Dinv29092 Davidia involucrata HOM05D004689 ORTHO05D185927 2.6e-06 57.4 44 63.6


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