Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00110 Aquilegia oxysepala HOM05D005275 ORTHO05D006435 9.5e-37 156.4 81 100.0
Aqoxy7G03390 Aquilegia oxysepala HOM05D005275 ORTHO05D006435 1.2e-23 112.8 66 90.9
PSO421G0063 Papaver somniferum HOM05D005275 ORTHO05D006435 1.6e-15 85.9 70 65.7
Thecc.10G105800 Theobroma cacao HOM05D005275 ORTHO05D006435 1.6e-15 85.9 59 71.2
Duzib114G0832 Durio zibethinus HOM05D005275 ORTHO05D006435 2.7e-15 85.1 59 71.2
PSO675G7727 Papaver somniferum HOM05D005275 ORTHO05D006435 6.0e-15 84.0 70 65.7
Cpa.g.sc69.87 Carica papaya HOM05D005275 ORTHO05D006435 2.3e-14 82.0 55 70.9
COL.COLO4_38546 Corchorus olitorius HOM05D005275 ORTHO05D006435 5.0e-14 80.9 59 66.1
TAR374G1406 Trochodendron aralioides HOM05D005275 ORTHO05D006435 1.1e-13 79.7 66 63.6
Atru.chr1.1611 Acer truncatum HOM05D005275 ORTHO05D006435 1.5e-13 79.3 63 61.9
Hma1.2p1_1507F.1_g287690 Hydrangea macrophylla HOM05D005275 ORTHO05D006435 1.5e-13 79.3 66 63.6
Nn8g39914 Nelumbo nucifera HOM05D005275 ORTHO05D006435 1.9e-13 79.0 54 68.5
MBI14_g34252_MAGBIO Magnolia biondii HOM05D005275 ORTHO05D006435 3.3e-13 78.2 65 61.5
Glyma.06G288700 Glycine max HOM05D005275 ORTHO05D006435 4.3e-13 77.8 60 61.7
Glyma.19G085300 Glycine max HOM05D005275 ORTHO05D006435 4.3e-13 77.8 60 63.3
Gorai.009G304100 Gossypium raimondii HOM05D005275 ORTHO05D006435 5.6e-13 77.4 74 55.4
Lj3g0024506 Lotus japonicus HOM05D005275 ORTHO05D006435 5.6e-13 77.4 59 66.1
Ciclev10022175m.g Citrus clementina HOM05D005275 ORTHO05D006435 7.3e-13 77.0 63 61.9
TPR.G34143 Trifolium pratense HOM05D005275 ORTHO05D006435 7.3e-13 77.0 60 63.3
arahy.Tifrunner.gnm1.ann1.AF7P3K Arachis hypogaea HOM05D005275 ORTHO05D006435 9.5e-13 76.6 59 64.4
arahy.Tifrunner.gnm1.ann1.G3VF9V Arachis hypogaea HOM05D005275 ORTHO05D006435 9.5e-13 76.6 59 64.4
arahy.Tifrunner.gnm1.ann1.T9K8GJ Arachis hypogaea HOM05D005275 ORTHO05D006435 1.2e-12 76.3 70 57.1
DCAR_008951 Daucus carota HOM05D005275 ORTHO05D006435 1.2e-12 76.3 66 62.1
Gohir.A05G287800 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.2e-12 76.3 74 54.1
Gohir.D05G289000 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.2e-12 76.3 63 58.7
PGR042G0357 Punica granatum HOM05D005275 ORTHO05D006435 1.2e-12 76.3 74 58.1
Cfa016214 Carpinus fangiana HOM05D005275 ORTHO05D006435 2.1e-12 75.5 63 58.7
Phvul.008G150700 Phaseolus vulgaris HOM05D005275 ORTHO05D006435 2.1e-12 75.5 60 63.3
CDE01G0034 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 2.8e-12 75.1 67 58.2
Gohir.A12G115900 Gossypium hirsutum HOM05D005275 ORTHO05D006435 2.8e-12 75.1 63 57.1
Glyma.16G061500 Glycine max HOM05D005275 ORTHO05D006435 3.6e-12 74.7 60 58.3
Gohir.A04G061600 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.6e-12 74.7 63 57.1
Gohir.A08G051700 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.6e-12 74.7 63 57.1
Gohir.A10G201500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.6e-12 74.7 63 57.1
Gohir.A11G223000 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.6e-12 74.7 63 57.1
Gohir.A12G028500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.6e-12 74.7 63 57.1
Gohir.A12G032500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.6e-12 74.7 63 57.1
Gohir.D01G152400 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.6e-12 74.7 63 57.1
Gohir.D05G384500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.6e-12 74.7 63 57.1
CANSAT21G1202 Cannabis sativa HOM05D005275 ORTHO05D006435 4.7e-12 74.3 63 60.3
Ca_10483_v3 Cicer arietinum L. HOM05D005275 ORTHO05D006435 4.7e-12 74.3 60 61.7
Lj1C1021T21 Lonicera japonica HOM05D005275 ORTHO05D006435 4.7e-12 74.3 66 62.1
Lj8A623T20 Lonicera japonica HOM05D005275 ORTHO05D006435 4.7e-12 74.3 66 62.1
Psat7g227360 Pisum sativum HOM05D005275 ORTHO05D006435 4.7e-12 74.3 60 61.7
CiPaw.06G045000 Carya illinoinensis HOM05D005275 ORTHO05D006435 6.2e-12 73.9 63 60.3
Lalb_Chr22g0360521 Lupinus albus HOM05D005275 ORTHO05D006435 8.1e-12 73.6 59 61.0
ATR0564G295 Amborella trichopoda HOM05D005275 ORTHO05D006435 1.1e-11 73.2 56 66.1
arahy.Tifrunner.gnm1.ann1.5IWG5U Arachis hypogaea HOM05D005275 ORTHO05D006435 1.1e-11 73.2 70 55.7
Cc01_g04130 Coffea canephora HOM05D005275 ORTHO05D006435 1.1e-11 73.2 58 58.6
FAN01G0712 Fragaria x ananassa HOM05D000442 ORTHO05D007032 1.1e-11 73.2 74 51.4
FAN10G0352 Fragaria x ananassa HOM05D005275 ORTHO05D006435 1.1e-11 73.2 74 51.4
FAN10G2096 Fragaria x ananassa HOM05D000442 ORTHO05D007032 1.1e-11 73.2 74 51.4
CSS0019342 Camellia sinensis var. sinensis HOM05D005275 ORTHO05D006435 1.8e-11 72.4 54 68.5
Medtr1g067700 Medicago truncatula HOM05D005275 ORTHO05D006435 1.8e-11 72.4 60 60.0
Zm00001eb397120 Zea mays HOM05D005275 ORTHO05D006435 1.8e-11 72.4 77 51.9
Actinidia34231 Actinidia chinensis HOM05D005275 ORTHO05D006435 2.3e-11 72.0 54 66.7
Eucgr.H01489 Eucalyptus grandis HOM05D005275 ORTHO05D006435 2.3e-11 72.0 59 59.3
Medtr5g038540 Medicago truncatula HOM05D005275 ORTHO05D006435 2.3e-11 72.0 60 60.0
Os05g0528900 Oryza sativa ssp. japonica HOM05D005275 ORTHO05D006435 2.3e-11 72.0 66 57.6
Prupe.2G313400 Prunus persica HOM05D005275 ORTHO05D006435 2.3e-11 72.0 53 67.9
Carub.0008s1327 Capsella rubella HOM05D005275 ORTHO05D006435 3.1e-11 71.6 59 57.6
TWI39G0072 Tripterygium wilfordii HOM05D005275 ORTHO05D006435 3.1e-11 71.6 59 62.7
GSVIVG01038570001 Vitis vinifera HOM05D005275 ORTHO05D006435 3.1e-11 71.6 68 54.4
HPP92_008880 Vanilla planifolia HOM05D005275 ORTHO05D006435 4.0e-11 71.2 54 61.1
Thhalv10014627m.g Eutrema salsugineum HOM05D005275 ORTHO05D006435 5.2e-11 70.9 59 55.9
EL10Ac3g05547 Beta vulgaris HOM05D005275 ORTHO05D006435 6.8e-11 70.5 66 56.1
CARHR266090 Cardamine hirsuta HOM05D005275 ORTHO05D006435 6.8e-11 70.5 59 55.9
THA.LOC104811989 Tarenaya hassleriana HOM05D005275 ORTHO05D006435 6.8e-11 70.5 63 54.0
Actinidia08664 Actinidia chinensis HOM05D005275 ORTHO05D006435 8.9e-11 70.1 55 61.8
AL8G27700 Arabidopsis lyrata HOM05D005275 ORTHO05D006435 8.9e-11 70.1 59 54.2
Ciclev10023889m.g Citrus clementina HOM05D005275 ORTHO05D006435 8.9e-11 70.1 63 58.7
RcHm_v2.0_Chr1g0381511 Rosa chinensis HOM05D005275 ORTHO05D006435 8.9e-11 70.1 74 50.0
Zm00001eb199670 Zea mays HOM05D005275 ORTHO05D006435 8.9e-11 70.1 66 56.1
AUR62014115 Chenopodium quinoa HOM05D005275 ORTHO05D006435 1.2e-10 69.7 68 51.5
QL09p007976 Quercus lobata HOM05D005275 ORTHO05D006435 1.2e-10 69.7 59 57.6
HanXRQChr16g0505961 Helianthus annuus HOM05D005275 ORTHO05D006435 1.5e-10 69.3 66 56.1
Migut.F01020 Erythranthe guttata HOM05D005275 ORTHO05D006435 2.0e-10 68.9 54 61.1
Ah.13g074120 Amaranthus hybridus HOM05D000770 ORTHO05D000586 3.4e-10 68.2 54 61.1
BcaB08g35669 Brassica carinata HOM05D005275 ORTHO05D006435 3.4e-10 68.2 59 54.2
Zm00001eb089870 Zea mays HOM05D005275 ORTHO05D006435 3.4e-10 68.2 77 49.4
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 4.4e-10 67.8 63 52.4
AUR62002807 Chenopodium quinoa HOM05D005275 ORTHO05D006435 4.4e-10 67.8 66 53.0
MD07G1293600 Malus domestica HOM05D005275 ORTHO05D006435 4.4e-10 67.8 63 55.6
Oeu060995.2 Olea europaea HOM05D005275 ORTHO05D006435 4.4e-10 67.8 54 61.1
BcaC03g14459 Brassica carinata HOM05D005275 ORTHO05D006435 5.8e-10 67.4 59 54.2
BcaC04g20510 Brassica carinata HOM05D005275 ORTHO05D006435 5.8e-10 67.4 59 54.2
A02p11320 Brassica napus HOM05D005275 ORTHO05D006435 5.8e-10 67.4 59 54.2
A10p10560 Brassica napus HOM05D005275 ORTHO05D006435 5.8e-10 67.4 59 54.2
C02p18700 Brassica napus HOM05D005275 ORTHO05D006435 5.8e-10 67.4 59 54.2
C09p42780 Brassica napus HOM05D005275 ORTHO05D006435 5.8e-10 67.4 59 54.2
BraA02t06194Z Brassica rapa HOM05D005275 ORTHO05D006435 5.8e-10 67.4 59 54.2
Sc02g0003260 Simmondsia chinensis HOM05D005275 ORTHO05D006435 5.8e-10 67.4 54 63.0
AT5G53070 Arabidopsis thaliana HOM05D005275 ORTHO05D006435 7.5e-10 67.0 59 52.5
MSTRG.48 Avicennia marina HOM05D005275 ORTHO05D006435 7.5e-10 67.0 54 59.3
Sabra12G0015200 Salix brachista HOM05D005275 ORTHO05D007032 7.5e-10 67.0 63 52.4
BcaB05g22006 Brassica carinata HOM05D000442 ORTHO05D007032 9.9e-10 66.6 59 52.5
Oeu037051.1 Olea europaea HOM05D005275 ORTHO05D006435 9.9e-10 66.6 54 61.1
BraA10t43140Z Brassica rapa HOM05D005275 ORTHO05D006435 1.3e-09 66.2 59 52.5
ECA236G4645 Erigeron canadensis HOM05D005275 ORTHO05D006435 1.3e-09 66.2 66 53.0
Gohir.D09G028700 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.7e-09 65.9 58 55.2
Lsat_1_v5_gn_7_91160 Lactuca sativa HOM05D005275 ORTHO05D006435 1.7e-09 65.9 66 54.5
Rhsim03G0210600 Rhododendron simsii HOM05D005275 ORTHO05D006435 2.2e-09 65.5 77 53.2
HanXRQChr04g0128021 Helianthus annuus HOM05D005275 ORTHO05D006435 2.9e-09 65.1 66 56.1
Potri.012G017300 Populus trichocarpa HOM05D005275 ORTHO05D006435 2.9e-09 65.1 63 50.8
Potri.012G121228 Populus trichocarpa HOM05D005275 ORTHO05D006435 4.9e-09 64.3 63 49.2
SHI02356 Sapria himalayana HOM05D005275 ORTHO05D006435 6.4e-09 63.9 58 56.9
Sed0013694 Sechium edule HOM05D005275 ORTHO05D006435 6.4e-09 63.9 59 54.2
Sed0020778 Sechium edule HOM05D005275 ORTHO05D006435 6.4e-09 63.9 59 55.9
Manes.01G140200 Manihot esculenta HOM05D005275 ORTHO05D006435 8.3e-09 63.5 59 52.5
Hund20626 Selenicereus undatus HOM05D005275 ORTHO05D006435 8.3e-09 63.5 54 57.4
Sp6g15240 Schrenkiella parvula HOM05D005275 ORTHO05D006435 1.1e-08 63.2 59 52.5
vmacro06395 Vaccinium macrocarpon HOM05D005275 ORTHO05D006435 1.4e-08 62.8 89 42.7
Gohir.A07G020100 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.2e-08 61.6 52 55.8
ClCG05G009030 Citrullus lanatus HOM05D005275 ORTHO05D006435 5.4e-08 60.8 59 54.2
BolC9t57154H Brassica oleracea HOM05D005275 ORTHO05D006435 9.2e-08 60.1 67 47.8
Haze_00229 Corylus avellana HOM05D005275 ORTHO05D006435 9.2e-08 60.1 69 50.7
MELO3C019369.2 Cucumis melo HOM05D005275 ORTHO05D006435 1.2e-07 59.7 59 52.5
Peaxi162Scf00251g01010 Petunia axillaris HOM05D005275 ORTHO05D006435 1.6e-07 59.3 52 55.8
CDE02G4591 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 2.1e-07 58.9 52 59.6
BolC2t08015H Brassica oleracea HOM05D005275 ORTHO05D006435 4.6e-07 57.8 73 43.8
Nitab4.5_0000006g0650 Nicotiana tabacum HOM05D005275 ORTHO05D006435 1.0e-06 56.6 52 50.0
Ciclev10023389m.g Citrus clementina HOM05D005275 ORTHO05D006435 1.3e-06 56.2 52 50.0
CsaV3_3G019750 Cucumis sativus L. HOM05D005275 ORTHO05D006435 1.7e-06 55.8 59 50.8
Nitab4.5_0004499g0010 Nicotiana tabacum HOM05D005275 ORTHO05D006435 1.7e-06 55.8 61 42.6
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 3.0e-06 55.1 75 42.7
Solyc05g032880.3 Solanum lycopersicum HOM05D005275 ORTHO05D006435 6.6e-06 53.9 52 48.1
Sopen05g023270 Solanum pennellii HOM05D005275 ORTHO05D006435 6.6e-06 53.9 52 48.1


User provided reference genes

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