Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy263s002 Aquilegia oxysepala HOM05D003704 ORTHO05D015243 5.2e-122 441.0 219 100.0
Aqoxy1G04161 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 2.1e-91 339.3 177 97.7
TAR628G1325 Trochodendron aralioides HOM05D003704 ORTHO05D005892 2.1e-30 136.7 132 56.1
Oeu003918.1 Olea europaea HOM05D003704 ORTHO05D005892 1.2e-20 104.4 183 41.5
MBI05_g32455_MAGBIO Magnolia biondii HOM05D003704 ORTHO05D005892 2.0e-20 103.6 102 55.9
Migut.O00529 Erythranthe guttata HOM05D003704 ORTHO05D005892 3.4e-20 102.8 145 45.5
GSVIVG01029933001 Vitis vinifera HOM05D003704 ORTHO05D005892 7.5e-20 101.7 182 37.4
MSTRG.28042 Avicennia marina HOM05D003704 ORTHO05D005892 2.8e-19 99.8 116 49.1
MBI05_g32454_MAGBIO Magnolia biondii HOM05D003704 ORTHO05D005892 2.8e-19 99.8 150 43.3
AUR62037223 Chenopodium quinoa HOM05D003704 ORTHO05D005892 4.8e-19 99.0 145 44.1
Migut.N01826 Erythranthe guttata HOM05D003704 ORTHO05D005892 4.8e-19 99.0 154 43.5
Cc02_g29160 Coffea canephora HOM05D003704 ORTHO05D005892 1.8e-18 97.1 184 39.1
Nn5g29073 Nelumbo nucifera HOM05D003704 ORTHO05D005892 1.8e-18 97.1 111 50.5
SGA_v2.0_scaffold5G02930 Striga asiatica HOM05D003704 ORTHO05D005892 2.4e-18 96.7 83 61.4
GSVIVG01000835001 Vitis vinifera HOM05D003704 ORTHO05D005892 3.1e-18 96.3 179 37.4
Dinv32045 Davidia involucrata HOM05D003704 ORTHO05D005892 7.0e-18 95.1 208 39.4
Ah.12g065080 Amaranthus hybridus HOM05D003704 ORTHO05D005892 1.2e-17 94.4 158 43.0
HanXRQChr17g0564051 Helianthus annuus HOM05D003704 ORTHO05D005892 2.7e-17 93.2 138 44.2
Sabra03G0148800 Salix brachista HOM05D003704 ORTHO05D005892 1.7e-16 90.5 158 42.4
Hund15714 Selenicereus undatus HOM05D003704 ORTHO05D005892 1.7e-16 90.5 170 42.4
Rhsim01G0123500 Rhododendron simsii HOM05D003704 ORTHO05D005892 2.9e-16 89.7 187 39.6
Actinidia21525 Actinidia chinensis HOM05D003704 ORTHO05D005892 3.8e-16 89.4 179 40.2
Eucgr.G03254 Eucalyptus grandis HOM05D003704 ORTHO05D005892 3.8e-16 89.4 182 37.9
DCAR_003239 Daucus carota HOM05D003704 ORTHO05D005892 8.5e-16 88.2 154 44.2
vmacro12686 Vaccinium macrocarpon HOM05D003704 ORTHO05D005892 8.5e-16 88.2 181 39.2
AUR62026830 Chenopodium quinoa HOM05D003704 ORTHO05D005892 1.9e-15 87.0 171 38.0
Lsat_1_v5_gn_4_29820 Lactuca sativa HOM05D003704 ORTHO05D005892 1.9e-15 87.0 81 55.6
TWI15G0657 Tripterygium wilfordii HOM05D003704 ORTHO05D005892 1.9e-15 87.0 168 36.3
Atru.chr11.2491 Acer truncatum HOM05D003704 ORTHO05D005892 2.5e-15 86.7 176 37.5
Manes.04G164800 Manihot esculenta HOM05D003704 ORTHO05D005892 2.5e-15 86.7 138 40.6
Sc11g0006670 Simmondsia chinensis HOM05D003704 ORTHO05D005892 2.5e-15 86.7 177 39.0
Thecc.05G198600 Theobroma cacao HOM05D003704 ORTHO05D005892 2.5e-15 86.7 166 42.8
HPP92_001563 Vanilla planifolia HOM05D003704 ORTHO05D015243 2.5e-15 86.7 134 42.5
Atru.chr11.2463 Acer truncatum HOM05D003704 ORTHO05D005892 3.2e-15 86.3 178 37.6
Lsat_1_v5_gn_1_25980 Lactuca sativa HOM05D000549 ORTHO05D015243 4.2e-15 85.9 81 55.6
unitig_21.g20277 Utricularia gibba HOM05D003704 ORTHO05D005892 4.2e-15 85.9 142 38.7
Lsat_1_v5_gn_2_12940 Lactuca sativa HOM05D003704 ORTHO05D015243 1.2e-14 84.3 81 54.3
Lj2A1006G35 Lonicera japonica HOM05D003704 ORTHO05D005892 1.2e-14 84.3 181 35.9
ATR0564G498 Amborella trichopoda HOM05D003704 ORTHO05D005892 1.6e-14 84.0 182 39.0
EL10Ac2g02849 Beta vulgaris HOM05D003704 ORTHO05D005892 1.6e-14 84.0 152 40.8
ECA234G1951 Erigeron canadensis HOM05D003704 ORTHO05D005892 1.6e-14 84.0 177 37.3
Gohir.A08G225100 Gossypium hirsutum HOM05D003704 ORTHO05D005892 6.1e-14 82.0 178 38.8
CAN.G1571.5 Capsicum annuum HOM05D003704 ORTHO05D005892 1.0e-13 81.3 156 37.8
Nitab4.5_0000316g0110 Nicotiana tabacum HOM05D003704 ORTHO05D005892 1.0e-13 81.3 181 38.1
PGR142G1874 Punica granatum HOM05D003704 ORTHO05D005892 1.4e-13 80.9 165 37.6
Sopen01g030440 Solanum pennellii HOM05D003704 ORTHO05D005892 1.8e-13 80.5 168 38.7
Potri.003G201200 Populus trichocarpa HOM05D003704 ORTHO05D005892 2.3e-13 80.1 177 37.3
Prupe.2G030100 Prunus persica HOM05D003704 ORTHO05D005892 3.0e-13 79.7 189 38.6
Gohir.D08G245500 Gossypium hirsutum HOM05D003704 ORTHO05D005892 5.2e-13 79.0 132 43.2
Gorai.004G262000 Gossypium raimondii HOM05D003704 ORTHO05D005892 5.2e-13 79.0 132 43.2
Duzib128G1318 Durio zibethinus HOM05D003704 ORTHO05D005892 6.8e-13 78.6 166 39.2
C04p66890 Brassica napus HOM05D003704 ORTHO05D005892 8.8e-13 78.2 83 48.2
BolC4t28191H Brassica oleracea HOM05D003704 ORTHO05D005892 8.8e-13 78.2 83 48.2
CARHR133480 Cardamine hirsuta HOM05D003704 ORTHO05D005892 8.8e-13 78.2 126 41.3
QL04p013824 Quercus lobata HOM05D003704 ORTHO05D005892 8.8e-13 78.2 177 35.6
CDE02G0954 Ceratophyllum demersum HOM05D003704 ORTHO05D005892 1.2e-12 77.8 180 35.6
Solyc01g068480.4 Solanum lycopersicum HOM05D003704 ORTHO05D005892 1.2e-12 77.8 168 38.1
Cfa010865 Carpinus fangiana HOM05D003704 ORTHO05D005892 2.0e-12 77.0 182 36.3
Sp4g21160 Schrenkiella parvula HOM05D003704 ORTHO05D005892 2.6e-12 76.6 76 48.7
BcaB02g09152 Brassica carinata HOM05D003704 ORTHO05D005892 3.4e-12 76.3 130 38.5
CsaV3_5G036520 Cucumis sativus L. HOM05D003704 ORTHO05D005892 3.4e-12 76.3 196 34.7
Os03g0387000 Oryza sativa ssp. japonica HOM05D003704 ORTHO05D005892 3.4e-12 76.3 184 34.8
THA.LOC104801743 Tarenaya hassleriana HOM05D003704 ORTHO05D005892 5.7e-12 75.5 178 33.1
BcaNung07214 Brassica carinata HOM05D003704 ORTHO05D005892 7.5e-12 75.1 128 37.5
C04p08870 Brassica napus HOM05D003704 ORTHO05D005892 7.5e-12 75.1 128 37.5
BraA05t19706Z Brassica rapa HOM05D003704 ORTHO05D005892 7.5e-12 75.1 136 37.5
Cpa.g.sc875.1 Carica papaya HOM05D003704 ORTHO05D005892 7.5e-12 75.1 65 63.1
A05p07400 Brassica napus HOM05D003704 ORTHO05D005892 9.8e-12 74.7 133 37.6
Aa31LG5G20910 Aethionema arabicum HOM05D003704 ORTHO05D005892 1.3e-11 74.3 79 46.8
Thhalv10016138m.g Eutrema salsugineum HOM05D003704 ORTHO05D005892 1.7e-11 73.9 99 40.4
CiPaw.13G011100 Carya illinoinensis HOM05D003704 ORTHO05D005892 2.2e-11 73.6 180 37.8
PSO781G0253 Papaver somniferum HOM05D003704 ORTHO05D005892 2.2e-11 73.6 64 60.9
Ca_12375_v3 Cicer arietinum L. HOM05D003704 ORTHO05D005892 2.8e-11 73.2 185 31.9
Lj2g0008107 Lotus japonicus HOM05D003704 ORTHO05D005892 2.8e-11 73.2 154 39.0
SEGI_35696 Sequoiadendron giganteum HOM05D003704 ORTHO05D005892 2.8e-11 73.2 65 56.9
Carub.0004s2079 Capsella rubella HOM05D003704 ORTHO05D005892 3.7e-11 72.8 83 49.4
AL4G36070 Arabidopsis lyrata HOM05D003704 ORTHO05D005892 4.9e-11 72.4 142 34.5
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 6.3e-11 72.0 79 51.9
PSO541G6018 Papaver somniferum HOM05D003704 ORTHO05D005892 8.3e-11 71.6 64 59.4
SMO230G0016 Selaginella moellendorffii HOM05D003704 ORTHO05D005892 8.3e-11 71.6 59 61.0
VMungo0251G0473 Vigna mungo HOM05D003704 ORTHO05D005892 8.3e-11 71.6 153 36.6
AT2G38770 Arabidopsis thaliana HOM05D003704 ORTHO05D005892 1.8e-10 70.5 139 36.0
Glyma.20G000700 Glycine max HOM05D003704 ORTHO05D005892 1.8e-10 70.5 145 37.2
Lsat_1_v5_gn_8_140021 Lactuca sativa HOM05D003704 ORTHO05D005892 3.1e-10 69.7 62 59.7
Psat6g100680 Pisum sativum HOM05D003704 ORTHO05D005892 3.1e-10 69.7 186 33.3
MELO3C012449.2 Cucumis melo HOM05D003704 ORTHO05D005892 5.4e-10 68.9 196 32.7
Zm00001eb018810 Zea mays HOM05D003704 ORTHO05D005892 9.2e-10 68.2 159 32.7
BolC4t22475H Brassica oleracea HOM05D003704 ORTHO05D005892 1.2e-09 67.8 128 36.7
Ciclev10030496m.g Citrus clementina HOM05D003704 ORTHO05D005892 1.2e-09 67.8 143 35.7
Lsat_1_v5_gn_7_88340 Lactuca sativa HOM05D000549 ORTHO05D015243 7.8e-09 65.1 65 56.9
Nitab4.5_0001888g0060 Nicotiana tabacum HOM05D003704 ORTHO05D005892 7.8e-09 65.1 179 35.8
Mapoly0170s0020 Marchantia polymorpha HOM05D003704 ORTHO05D005892 1.3e-08 64.3 196 34.7
Phvul.003G001700 Phaseolus vulgaris HOM05D003704 ORTHO05D005892 1.3e-08 64.3 97 41.2
Potri.001G024401 Populus trichocarpa HOM05D003704 ORTHO05D015243 1.3e-08 64.3 70 54.3
arahy.Tifrunner.gnm1.ann1.75MG08 Arachis hypogaea HOM05D003704 ORTHO05D005892 1.7e-08 63.9 125 36.0
arahy.Tifrunner.gnm1.ann1.RZB3JM Arachis hypogaea HOM05D003704 ORTHO05D005892 1.7e-08 63.9 107 37.4
AagrBONN_evm.TU.Sc2ySwM_344.1100 Anthoceros agrestis HOM05D003704 ORTHO05D005892 2.3e-08 63.5 167 35.9
Lalb_Chr10g0094821 Lupinus albus HOM05D003704 ORTHO05D015243 5.0e-08 62.4 153 32.0
Lalb_Chr17g0337761 Lupinus albus HOM05D003704 ORTHO05D005892 5.0e-08 62.4 149 33.6
Medtr1g038815 Medicago truncatula HOM05D003704 ORTHO05D005892 6.6e-08 62.0 59 54.2
RcHm_v2.0_Chr1g0319731 Rosa chinensis HOM05D003704 ORTHO05D005892 8.6e-08 61.6 186 34.4
FvH4_7g02390 Fragaria vesca HOM05D003704 ORTHO05D005892 1.1e-07 61.2 182 35.2
FAN06G0794 Fragaria x ananassa HOM05D003704 ORTHO05D005892 1.1e-07 61.2 182 35.2
Glyma.09G285300 Glycine max HOM05D003704 ORTHO05D005892 1.1e-07 61.2 155 34.2
MD07G1033300 Malus domestica HOM05D003704 ORTHO05D005892 1.5e-07 60.8 177 34.5
FAN03G0678 Fragaria x ananassa HOM05D003704 ORTHO05D005892 1.9e-07 60.5 177 36.2
TPR.G35533 Trifolium pratense HOM05D003704 ORTHO05D005892 1.9e-07 60.5 94 39.4
CANSAT64G2305 Cannabis sativa HOM05D003704 ORTHO05D005892 2.5e-07 60.1 129 37.2
MD02G1293400 Malus domestica HOM05D003704 ORTHO05D005892 1.6e-06 57.4 143 34.3
FAN01G0955 Fragaria x ananassa HOM05D003704 ORTHO05D005892 2.1e-06 57.0 181 34.8
Sed0025295 Sechium edule HOM05D003704 ORTHO05D005892 2.1e-06 57.0 178 33.7
ClCG05G020780 Citrullus lanatus HOM05D003704 ORTHO05D005892 8.0e-06 55.1 199 31.2


User provided reference genes

Program Settings