Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g140800 Amaranthus hybridus HOM05D001794 ORTHO05D023348 3.9e-44 181.0 87 100.0
Ah.02g125220 Amaranthus hybridus HOM05D001794 ORTHO05D004177 1.6e-37 159.1 87 90.8
EL10Ac6g15572 Beta vulgaris HOM05D001794 ORTHO05D004177 1.8e-33 145.6 93 82.8
AUR62007559 Chenopodium quinoa HOM05D001794 ORTHO05D004177 8.3e-31 136.7 95 76.8
Hund16428 Selenicereus undatus HOM05D001794 ORTHO05D004177 1.1e-30 136.3 88 79.5
AUR62000825 Chenopodium quinoa HOM05D001794 ORTHO05D004177 9.2e-30 133.3 90 78.9
AUR62004044 Chenopodium quinoa HOM05D001794 ORTHO05D004177 1.6e-29 132.5 90 77.8
AUR62005148 Chenopodium quinoa HOM05D001794 ORTHO05D004177 3.5e-29 131.3 90 76.7
Lalb_Chr09g0322451 Lupinus albus HOM05D001794 ORTHO05D004177 7.8e-29 130.2 89 78.7
QL06p045882 Quercus lobata HOM05D001794 ORTHO05D004177 1.0e-28 129.8 91 78.0
TPR.G22290 Trifolium pratense HOM05D001794 ORTHO05D004177 1.3e-28 129.4 88 80.7
Ca_24842_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 2.3e-28 128.6 87 77.0
Psat2g160000 Pisum sativum HOM05D001794 ORTHO05D004177 3.0e-28 128.3 87 79.3
arahy.Tifrunner.gnm1.ann1.SUCZ0Z Arachis hypogaea HOM05D001794 ORTHO05D004177 3.9e-28 127.9 90 76.7
THA.LOC104819221 Tarenaya hassleriana HOM05D001794 ORTHO05D004177 6.6e-28 127.1 91 75.8
Oeu042258.3 Olea europaea HOM05D001794 ORTHO05D004177 8.6e-28 126.7 89 76.4
Sp2g29920 Schrenkiella parvula HOM05D001794 ORTHO05D004177 8.6e-28 126.7 87 77.0
AL8G44700 Arabidopsis lyrata HOM05D001794 ORTHO05D004177 1.1e-27 126.3 92 75.0
Carub.0008s2775 Capsella rubella HOM05D001794 ORTHO05D004177 1.1e-27 126.3 92 75.0
Solyc02g085350.4 Solanum lycopersicum HOM05D001794 ORTHO05D004177 1.5e-27 125.9 89 76.4
Sopen02g030040 Solanum pennellii HOM05D001794 ORTHO05D004177 1.5e-27 125.9 89 76.4
Nitab4.5_0003835g0030 Nicotiana tabacum HOM05D001794 ORTHO05D004177 1.9e-27 125.6 90 75.6
AT5G66760 Arabidopsis thaliana HOM05D001794 ORTHO05D004177 2.5e-27 125.2 92 73.9
CANSAT01G3171 Cannabis sativa HOM05D001794 ORTHO05D004177 2.5e-27 125.2 95 73.7
Lj4C200G5 Lonicera japonica HOM05D001794 ORTHO05D004177 2.5e-27 125.2 90 75.6
Nitab4.5_0000434g0160 Nicotiana tabacum HOM05D001794 ORTHO05D004177 2.5e-27 125.2 89 75.3
Oeu056760.1 Olea europaea HOM05D001794 ORTHO05D004177 2.5e-27 125.2 89 76.4
Potri.007G026400 Populus trichocarpa HOM05D001794 ORTHO05D004177 2.5e-27 125.2 91 78.0
BcaC03g18401 Brassica carinata HOM05D001794 ORTHO05D004177 3.3e-27 124.8 87 73.6
BcaC04g23158 Brassica carinata HOM05D001794 ORTHO05D004177 3.3e-27 124.8 88 77.3
BcaC06g34742 Brassica carinata HOM05D001794 ORTHO05D004177 3.3e-27 124.8 87 75.9
A09p09790 Brassica napus HOM05D001794 ORTHO05D004177 3.3e-27 124.8 88 77.3
C07p25030 Brassica napus HOM05D001794 ORTHO05D004177 3.3e-27 124.8 87 75.9
C09p11590 Brassica napus HOM05D001794 ORTHO05D004177 3.3e-27 124.8 88 77.3
BolC2t12541H Brassica oleracea HOM05D001794 ORTHO05D004177 3.3e-27 124.8 87 73.6
BolC7t43035H Brassica oleracea HOM05D001794 ORTHO05D004177 3.3e-27 124.8 87 75.9
BraA09t36626Z Brassica rapa HOM05D001794 ORTHO05D004177 3.3e-27 124.8 88 77.3
COL.COLO4_22089 Corchorus olitorius HOM05D001794 ORTHO05D004177 3.3e-27 124.8 89 77.5
BcaNung00465 Brassica carinata HOM05D001794 ORTHO05D004177 4.3e-27 124.4 87 75.9
A07p17170 Brassica napus HOM05D001794 ORTHO05D004177 4.3e-27 124.4 87 75.9
BraA07t29445Z Brassica rapa HOM05D001794 ORTHO05D004177 4.3e-27 124.4 87 75.9
CARHR280940 Cardamine hirsuta HOM05D001794 ORTHO05D004177 4.3e-27 124.4 90 74.4
RcHm_v2.0_Chr2g0101771 Rosa chinensis HOM05D001794 ORTHO05D004177 4.3e-27 124.4 92 73.9
VMungo1215G0549 Vigna mungo HOM05D001794 ORTHO05D004177 4.3e-27 124.4 90 74.4
BcaB02g09993 Brassica carinata HOM05D001794 ORTHO05D004177 5.6e-27 124.0 87 77.0
C02p64800 Brassica napus HOM05D001794 ORTHO05D004177 5.6e-27 124.0 87 74.7
ClCG07G006190 Citrullus lanatus HOM05D001794 ORTHO05D004177 5.6e-27 124.0 93 75.3
CsaV3_4G005080 Cucumis sativus L. HOM05D001794 ORTHO05D004177 5.6e-27 124.0 93 75.3
FAN23G1783 Fragaria x ananassa HOM05D001794 ORTHO05D004177 5.6e-27 124.0 92 72.8
Sabra07G0023200 Salix brachista HOM05D001794 ORTHO05D004177 5.6e-27 124.0 91 76.9
Sed0002777 Sechium edule HOM05D001794 ORTHO05D004177 5.6e-27 124.0 94 75.5
Aqoxy6G01095 Aquilegia oxysepala HOM05D001794 ORTHO05D004177 7.3e-27 123.6 92 76.1
Duzib264G0324 Durio zibethinus HOM05D001794 ORTHO05D004177 7.3e-27 123.6 89 75.3
Sc03g0002930 Simmondsia chinensis HOM05D001794 ORTHO05D004177 7.3e-27 123.6 89 73.0
THA.LOC104821278 Tarenaya hassleriana HOM05D001794 ORTHO05D004177 7.3e-27 123.6 92 72.8
Glyma.01G175600 Glycine max HOM05D001794 ORTHO05D004177 9.5e-27 123.2 89 77.5
Prupe.7G153600 Prunus persica HOM05D001794 ORTHO05D004177 9.5e-27 123.2 91 75.8
Medtr5g020050 Medicago truncatula HOM05D001794 ORTHO05D004177 1.2e-26 122.9 88 77.3
Phvul.003G253200 Phaseolus vulgaris HOM05D001794 ORTHO05D004177 1.2e-26 122.9 87 75.9
Potri.005G123900 Populus trichocarpa HOM05D001794 ORTHO05D004177 1.2e-26 122.9 94 73.4
VMungo0251G2041 Vigna mungo HOM05D001794 ORTHO05D004177 1.2e-26 122.9 87 75.9
MELO3C017560.2 Cucumis melo HOM05D001794 ORTHO05D004177 1.6e-26 122.5 93 74.2
Lalb_Chr05g0212841 Lupinus albus HOM05D001794 ORTHO05D004177 1.6e-26 122.5 87 77.0
PGSC0003DMG400014901 Solanum tuberosum HOM05D001794 ORTHO05D004177 1.6e-26 122.5 89 74.2
Atru.chr3.565 Acer truncatum HOM05D001794 ORTHO05D004177 2.1e-26 122.1 87 74.7
HanXRQChr09g0261451 Helianthus annuus HOM05D001794 ORTHO05D004177 2.1e-26 122.1 89 74.2
TPR.G34987 Trifolium pratense HOM05D001794 ORTHO05D004177 2.1e-26 122.1 88 75.0
ClCG07G009150 Citrullus lanatus HOM05D001794 ORTHO05D023348 2.8e-26 121.7 93 74.2
FvH4_1g13410 Fragaria vesca HOM05D001794 ORTHO05D004177 2.8e-26 121.7 92 72.8
FAN26G2941 Fragaria x ananassa HOM05D001794 ORTHO05D004177 2.8e-26 121.7 92 72.8
FAN28G0311 Fragaria x ananassa HOM05D001794 ORTHO05D004177 2.8e-26 121.7 92 72.8
Lalb_Chr16g0377871 Lupinus albus HOM05D001794 ORTHO05D004177 2.8e-26 121.7 87 77.0
MD02G1148900 Malus domestica HOM05D001794 ORTHO05D004177 2.8e-26 121.7 91 74.7
Phvul.002G029800 Phaseolus vulgaris HOM05D001794 ORTHO05D004177 2.8e-26 121.7 90 74.4
Aa31LG1G15320 Aethionema arabicum HOM05D001794 ORTHO05D004177 3.6e-26 121.3 91 73.6
Aa31LG8G15600 Aethionema arabicum HOM05D001794 ORTHO05D004177 3.6e-26 121.3 92 71.7
Dinv39978 Davidia involucrata HOM05D001794 ORTHO05D004177 3.6e-26 121.3 90 72.2
Gohir.D03G015200 Gossypium hirsutum HOM05D001794 ORTHO05D004177 3.6e-26 121.3 89 73.0
Gorai.003G015500 Gossypium raimondii HOM05D001794 ORTHO05D004177 3.6e-26 121.3 89 73.0
Nn5g29584 Nelumbo nucifera HOM05D001794 ORTHO05D004177 3.6e-26 121.3 92 71.7
Psat4g092360 Pisum sativum HOM05D001794 ORTHO05D004177 3.6e-26 121.3 87 74.7
CiPaw.01G037100 Carya illinoinensis HOM05D001794 ORTHO05D004177 4.7e-26 120.9 94 73.4
CDE04G3633 Ceratophyllum demersum HOM05D001794 ORTHO05D004177 4.7e-26 120.9 94 64.9
Dinv13541 Davidia involucrata HOM05D001794 ORTHO05D004177 4.7e-26 120.9 90 71.1
TAR381G1199 Trochodendron aralioides HOM05D001794 ORTHO05D004177 4.7e-26 120.9 93 71.0
Thhalv10022591m.g Eutrema salsugineum HOM05D001794 ORTHO05D004177 6.2e-26 120.6 92 70.7
Gohir.A12G064900 Gossypium hirsutum HOM05D001794 ORTHO05D004177 6.2e-26 120.6 89 74.2
Gorai.008G068200 Gossypium raimondii HOM05D001794 ORTHO05D004177 6.2e-26 120.6 89 74.2
Manes.01G134800 Manihot esculenta HOM05D001794 ORTHO05D004177 6.2e-26 120.6 91 76.9
Hma1.2p1_0400F.1_g144450 Hydrangea macrophylla HOM05D001794 ORTHO05D004177 8.1e-26 120.2 90 73.3
MBI16_g34331_MAGBIO Magnolia biondii HOM05D001794 ORTHO05D004177 8.1e-26 120.2 92 71.7
CDE06G0698 Ceratophyllum demersum HOM05D001794 ORTHO05D004177 1.1e-25 119.8 94 64.9
Gohir.D12G065000 Gossypium hirsutum HOM05D001794 ORTHO05D004177 1.1e-25 119.8 89 74.2
MD15G1263800 Malus domestica HOM05D001794 ORTHO05D004177 1.1e-25 119.8 91 73.6
Sabra05G0101500 Salix brachista HOM05D001794 ORTHO05D004177 1.1e-25 119.8 95 70.5
Ciclev10025149m.g Citrus clementina HOM05D001794 ORTHO05D004177 1.4e-25 119.4 91 71.4
Duzib187G1849 Durio zibethinus HOM05D001794 ORTHO05D004177 1.4e-25 119.4 99 68.7
Gohir.A02G164800 Gossypium hirsutum HOM05D001794 ORTHO05D023348 1.4e-25 119.4 89 73.0
Cc07_g09450 Coffea canephora HOM05D001794 ORTHO05D004177 1.8e-25 119.0 90 72.2
Migut.L00516 Erythranthe guttata HOM05D001794 ORTHO05D023348 1.8e-25 119.0 89 74.2
Migut.L00517 Erythranthe guttata HOM05D001794 ORTHO05D004177 1.8e-25 119.0 89 74.2
Eucgr.I02452 Eucalyptus grandis HOM05D001794 ORTHO05D004177 1.8e-25 119.0 89 71.9
Thhalv10003821m.g Eutrema salsugineum HOM05D001794 ORTHO05D004177 1.8e-25 119.0 87 74.7
FAN19G0995 Fragaria x ananassa HOM05D001794 ORTHO05D004177 2.3e-25 118.6 91 72.5
ECA232G2500 Erigeron canadensis HOM05D001794 ORTHO05D004177 3.1e-25 118.2 87 74.7
Actinidia19180 Actinidia chinensis HOM05D001794 ORTHO05D023348 4.0e-25 117.9 90 74.4
DCAR_017270 Daucus carota HOM05D001794 ORTHO05D004177 5.2e-25 117.5 90 70.0
Lsat_1_v5_gn_4_150721 Lactuca sativa HOM05D001794 ORTHO05D004177 5.2e-25 117.5 88 72.7
Nn1g05014 Nelumbo nucifera HOM05D001794 ORTHO05D004177 5.2e-25 117.5 95 69.5
Thecc.01G036800 Theobroma cacao HOM05D001794 ORTHO05D004177 5.2e-25 117.5 89 71.9
CSS0026761 Camellia sinensis var. sinensis HOM05D001794 ORTHO05D004177 6.8e-25 117.1 89 75.3
TWI09G0850 Tripterygium wilfordii HOM05D001794 ORTHO05D004177 6.8e-25 117.1 93 71.0
AL3G51730 Arabidopsis lyrata HOM05D001794 ORTHO05D004177 8.9e-25 116.7 92 69.6
CARHR109040 Cardamine hirsuta HOM05D001794 ORTHO05D004177 8.9e-25 116.7 91 70.3
Lj4g0016367 Lotus japonicus HOM05D001794 ORTHO05D004177 8.9e-25 116.7 91 69.2
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 8.9e-25 116.7 93 73.1
Ca_22263_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 1.2e-24 116.3 87 72.4
Ca_22277_v3 Cicer arietinum L. HOM05D001794 ORTHO05D004177 1.2e-24 116.3 87 72.4
CSS0011689 Camellia sinensis var. sinensis HOM05D001794 ORTHO05D004177 1.5e-24 115.9 89 74.2
unitig_748.g8759 Utricularia gibba HOM05D001794 ORTHO05D004177 1.5e-24 115.9 89 73.0
DCAR_021442 Daucus carota HOM05D001794 ORTHO05D004177 2.0e-24 115.5 89 69.7
SGA_v2.0_scaffold3G01839 Striga asiatica HOM05D001794 ORTHO05D004177 2.0e-24 115.5 89 73.0
ATR0733G007 Amborella trichopoda HOM05D001794 ORTHO05D004177 3.4e-24 114.8 91 71.4
Glyma.02G057400 Glycine max HOM05D001794 ORTHO05D004177 3.4e-24 114.8 92 70.7
AT2G18450 Arabidopsis thaliana HOM05D001794 ORTHO05D004177 4.4e-24 114.4 90 67.8
HanXRQChr16g0530311 Helianthus annuus HOM05D001794 ORTHO05D004177 4.4e-24 114.4 91 72.5
Os07g0134800 Oryza sativa ssp. japonica HOM05D001794 ORTHO05D004177 4.4e-24 114.4 91 72.5
A06p33210 Brassica napus HOM05D001794 ORTHO05D004177 7.5e-24 113.6 91 69.2
PSO541G3878 Papaver somniferum HOM05D001794 ORTHO05D004177 9.9e-24 113.2 91 69.2
PSO675G6080 Papaver somniferum HOM05D001794 ORTHO05D004177 9.9e-24 113.2 91 69.2
HPP92_017748 Vanilla planifolia HOM05D001794 ORTHO05D004177 9.9e-24 113.2 90 66.7
vmacro17842 Vaccinium macrocarpon HOM05D001794 ORTHO05D004177 1.3e-23 112.8 90 68.9
HPP92_017680 Vanilla planifolia HOM05D001794 ORTHO05D004177 1.3e-23 112.8 90 66.7
Duzib147G0476 Durio zibethinus HOM05D001794 ORTHO05D004177 1.7e-23 112.5 99 64.6
SEGI_23998 Sequoiadendron giganteum HOM05D001794 ORTHO05D004177 1.7e-23 112.5 95 68.4
FAN26G1716 Fragaria x ananassa HOM05D001794 ORTHO05D004177 2.9e-23 111.7 70 84.3
Cpa.g.sc6.105 Carica papaya HOM05D001794 ORTHO05D004177 4.9e-23 110.9 90 68.9
PGR119G0879 Punica granatum HOM05D001794 ORTHO05D004177 4.9e-23 110.9 89 70.8
SEGI_34747 Sequoiadendron giganteum HOM05D001794 ORTHO05D004177 6.4e-23 110.5 95 67.4
BcaB08g34836 Brassica carinata HOM05D001794 ORTHO05D004177 1.1e-22 109.8 91 68.1
C03p59240 Brassica napus HOM05D001794 ORTHO05D004177 1.4e-22 109.4 91 67.0
Cfa004301 Carpinus fangiana HOM05D001794 ORTHO05D004177 1.4e-22 109.4 54 98.1
Sp3g31870 Schrenkiella parvula HOM05D001794 ORTHO05D004177 1.4e-22 109.4 94 67.0
BcaC01g02866 Brassica carinata HOM05D001794 ORTHO05D004177 1.9e-22 109.0 89 65.2
BolC3t18181H Brassica oleracea HOM05D001794 ORTHO05D004177 1.9e-22 109.0 89 65.2
BraA06t26252Z Brassica rapa HOM05D001794 ORTHO05D004177 2.4e-22 108.6 93 67.7
Zm00001eb117970 Zea mays HOM05D001794 ORTHO05D004177 3.2e-22 108.2 88 69.3
Zm00001eb299550 Zea mays HOM05D001794 ORTHO05D004177 3.2e-22 108.2 88 69.3
Hund28964 Selenicereus undatus HOM05D001794 ORTHO05D004177 9.2e-22 106.7 55 92.7
Hund28966 Selenicereus undatus HOM05D001794 ORTHO05D004177 9.2e-22 106.7 55 92.7
GSVIVG01018976001 Vitis vinifera HOM05D001794 ORTHO05D004177 1.6e-21 105.9 128 54.7
Haze_15100 Corylus avellana HOM05D001794 ORTHO05D004177 2.1e-21 105.5 52 98.1
Mapoly0002s0067 Marchantia polymorpha HOM05D001794 ORTHO05D004177 2.7e-21 105.1 69 73.9
Oeu056748.1 Olea europaea HOM05D001794 ORTHO05D004177 3.5e-21 104.8 59 84.7
SMO116G0376 Selaginella moellendorffii HOM05D001794 ORTHO05D004177 4.6e-21 104.4 68 79.4
CBR_g31678 Chara braunii HOM05D001794 ORTHO05D004177 7.8e-21 103.6 53 92.5
AagrBONN_evm.TU.Sc2ySwM_368.2634 Anthoceros agrestis HOM05D001794 ORTHO05D004177 8.6e-20 100.1 51 92.2
PRCOL_00005432 Prasinoderma coloniale HOM05D001794 ORTHO05D004177 2.5e-19 98.6 50 94.0
Pp3c6_24710 Physcomitrium patens HOM05D001794 ORTHO05D004177 4.3e-19 97.8 55 87.3
MCO12G459 Micromonas commoda HOM05D001794 ORTHO05D004177 5.6e-19 97.4 54 85.2
Pp3c27_4920 Physcomitrium patens HOM05D001794 ORTHO05D004177 9.5e-19 96.7 67 76.1
Cre14.g619133 Chlamydomonas reinhardtii HOM05D001794 ORTHO05D004177 1.2e-18 96.3 57 80.7
Cfa024194 Carpinus fangiana HOM05D001794 ORTHO05D004177 8.1e-18 93.6 96 55.2
Haze_26259 Corylus avellana HOM05D001794 ORTHO05D004177 2.9e-15 85.1 72 62.5
Carub.0003s3259 Capsella rubella HOM05D001794 ORTHO05D004177 8.7e-12 73.6 89 53.9
SalBow5G5094 Salvia bowleyana HOM05D001794 ORTHO05D004177 2.5e-11 72.0 34 100.0


User provided reference genes

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