Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g005680 Amaranthus hybridus HOM05D004877 ORTHO05D005942 1.4e-184 649.4 330 100.0
AUR62022182 Chenopodium quinoa HOM05D004877 ORTHO05D005942 2.0e-162 575.9 330 87.9
AUR62031885 Chenopodium quinoa HOM05D004877 ORTHO05D005942 1.0e-161 573.5 331 87.9
EL10Ac9g22101 Beta vulgaris HOM05D004877 ORTHO05D005942 2.0e-154 549.3 376 77.1
Sc10g0007170 Simmondsia chinensis HOM05D004877 ORTHO05D005942 8.9e-150 533.9 334 81.1
Hund06654 Selenicereus undatus HOM05D004877 ORTHO05D005942 1.1e-147 526.9 330 81.2
Sc10g0007240 Simmondsia chinensis HOM05D004877 ORTHO05D005942 1.9e-147 526.2 334 79.9
QL05p020530 Quercus lobata HOM05D004877 ORTHO05D005942 2.8e-143 512.3 330 78.5
Hund00671 Selenicereus undatus HOM05D004877 ORTHO05D005942 3.6e-143 511.9 332 79.2
Eucgr.J02948 Eucalyptus grandis HOM05D004877 ORTHO05D005942 6.2e-143 511.1 331 76.7
TWI18G0989 Tripterygium wilfordii HOM05D004877 ORTHO05D005942 8.9e-142 507.3 332 77.1
PGR102G2474 Punica granatum HOM05D004877 ORTHO05D005942 6.4e-140 501.1 335 77.6
GSVIVG01017013001 Vitis vinifera HOM05D004877 ORTHO05D005942 5.4e-139 498.0 330 76.1
Atru.chr1.3498 Acer truncatum HOM05D004877 ORTHO05D005942 2.1e-138 496.1 333 76.3
Thecc.06G097500 Theobroma cacao HOM05D004877 ORTHO05D005942 1.7e-137 493.0 330 74.8
Glyma.13G355300 Glycine max HOM05D004877 ORTHO05D005942 6.6e-137 491.1 333 75.4
CiPaw.01G232800 Carya illinoinensis HOM05D004877 ORTHO05D005942 2.5e-136 489.2 332 73.8
CANSAT01G3179 Cannabis sativa HOM05D004877 ORTHO05D005942 4.3e-136 488.4 331 74.3
Glyma.15G018900 Glycine max HOM05D004877 ORTHO05D005942 5.6e-136 488.0 333 75.1
arahy.Tifrunner.gnm1.ann1.64XDM2 Arachis hypogaea HOM05D004877 ORTHO05D005942 1.6e-135 486.5 333 75.1
Manes.11G035000 Manihot esculenta HOM05D004877 ORTHO05D005942 1.6e-135 486.5 333 74.2
Manes.04G132600 Manihot esculenta HOM05D004877 ORTHO05D005942 2.1e-135 486.1 333 74.8
arahy.Tifrunner.gnm1.ann1.4Y1F7A Arachis hypogaea HOM05D004877 ORTHO05D005942 2.8e-135 485.7 333 75.1
Gohir.A02G118600 Gossypium hirsutum HOM05D004877 ORTHO05D005942 3.6e-135 485.3 331 72.8
Lj3g0003786 Lotus japonicus HOM05D004877 ORTHO05D005942 3.6e-135 485.3 333 75.7
VMungo1080G0916 Vigna mungo HOM05D004877 ORTHO05D005942 2.3e-134 482.6 333 75.4
Gohir.D03G059200 Gossypium hirsutum HOM05D004877 ORTHO05D005942 3.1e-134 482.3 332 72.3
Medtr2g101270 Medicago truncatula HOM05D004877 ORTHO05D005942 3.1e-134 482.3 332 73.8
Gorai.003G063100 Gossypium raimondii HOM05D004877 ORTHO05D005942 4.0e-134 481.9 331 72.2
Ca_01157_v3 Cicer arietinum L. HOM05D004877 ORTHO05D005942 8.9e-134 480.7 333 73.9
Lalb_Chr24g0396111 Lupinus albus HOM05D004877 ORTHO05D005942 1.5e-133 479.9 333 74.8
Ciclev10026016m.g Citrus clementina HOM05D004877 ORTHO05D005942 2.0e-133 479.6 339 74.3
Duzib235G0210 Durio zibethinus HOM05D004877 ORTHO05D005942 3.4e-133 478.8 330 72.1
Actinidia32706 Actinidia chinensis HOM05D004877 ORTHO05D005942 5.8e-133 478.0 338 74.9
Dinv37993 Davidia involucrata HOM05D004877 ORTHO05D005942 7.5e-133 477.6 339 75.2
CSS0014120 Camellia sinensis var. sinensis HOM05D004877 ORTHO05D005942 1.7e-132 476.5 336 75.0
Phvul.005G167000 Phaseolus vulgaris HOM05D004877 ORTHO05D005942 2.9e-132 475.7 332 74.1
Psat5g297080 Pisum sativum HOM05D004877 ORTHO05D005942 4.9e-132 474.9 333 73.3
MD09G1205800 Malus domestica HOM05D004877 ORTHO05D005942 1.1e-131 473.8 331 73.1
Dinv30451 Davidia involucrata HOM05D004877 ORTHO05D005942 1.9e-131 473.0 338 74.0
MD17G1186700 Malus domestica HOM05D004877 ORTHO05D005942 1.9e-131 473.0 331 72.5
CiPaw.02G146900 Carya illinoinensis HOM05D004877 ORTHO05D005942 2.4e-131 472.6 332 73.2
TPR.G37257 Trifolium pratense HOM05D004877 ORTHO05D005942 2.4e-131 472.6 334 73.7
Prupe.3G061200 Prunus persica HOM05D004877 ORTHO05D005942 4.1e-131 471.9 331 71.9
Cc04_g02700 Coffea canephora HOM05D004877 ORTHO05D005942 3.5e-130 468.8 338 71.9
Lalb_Chr14g0373091 Lupinus albus HOM05D004877 ORTHO05D005942 4.6e-130 468.4 333 72.7
SalBow1G2757 Salvia bowleyana HOM05D004877 ORTHO05D005942 6.0e-130 468.0 339 70.8
SalBow2G1418 Salvia bowleyana HOM05D004877 ORTHO05D005942 6.0e-130 468.0 339 70.8
COL.COLO4_30486 Corchorus olitorius HOM05D004877 ORTHO05D005942 1.0e-129 467.2 331 73.1
Duzib192G0168 Durio zibethinus HOM05D004877 ORTHO05D005942 1.0e-129 467.2 330 71.5
Gohir.D03G059150 Gossypium hirsutum HOM05D004877 ORTHO05D005942 1.0e-129 467.2 318 73.3
RcHm_v2.0_Chr2g0140061 Rosa chinensis HOM05D004877 ORTHO05D005942 6.6e-129 464.5 333 71.2
TAR636G0039 Trochodendron aralioides HOM05D004877 ORTHO05D005942 1.5e-128 463.4 331 71.0
PGSC0003DMG400002534 Solanum tuberosum HOM05D004877 ORTHO05D005942 2.8e-127 459.1 338 71.3
CAN.G438.5 Capsicum annuum HOM05D004877 ORTHO05D005942 4.7e-127 458.4 339 70.8
FAN05G1125 Fragaria x ananassa HOM05D004877 ORTHO05D005942 6.2e-127 458.0 333 70.0
Nitab4.5_0001755g0090 Nicotiana tabacum HOM05D004877 ORTHO05D005942 6.2e-127 458.0 338 71.6
Nitab4.5_0003167g0040 Nicotiana tabacum HOM05D004877 ORTHO05D005942 6.2e-127 458.0 338 71.9
Sopen03g039700 Solanum pennellii HOM05D004877 ORTHO05D005942 6.2e-127 458.0 338 71.6
FAN14G1716 Fragaria x ananassa HOM05D004877 ORTHO05D005942 6.8e-126 454.5 333 70.0
FvH4_6g32170 Fragaria vesca HOM05D004877 ORTHO05D005942 8.9e-126 454.1 333 70.0
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 1.2e-125 453.8 338 71.0
ClCG09G000060 Citrullus lanatus HOM05D004877 ORTHO05D005942 2.6e-125 452.6 334 70.1
THA.LOC104817965 Tarenaya hassleriana HOM05D004877 ORTHO05D005942 2.6e-125 452.6 334 68.6
FAN09G1375 Fragaria x ananassa HOM05D004877 ORTHO05D005942 4.4e-125 451.8 333 69.7
Sp3g14680 Schrenkiella parvula HOM05D004877 ORTHO05D005942 9.9e-125 450.7 334 68.0
Thhalv10021095m.g Eutrema salsugineum HOM05D004877 ORTHO05D005942 1.7e-124 449.9 336 67.6
Peaxi162Scf00038g00844 Petunia axillaris HOM05D004877 ORTHO05D005942 1.7e-124 449.9 341 69.5
FAN02G1875 Fragaria x ananassa HOM05D004877 ORTHO05D005942 3.8e-124 448.7 333 69.4
Potri.001G188300 Populus trichocarpa HOM05D004877 ORTHO05D005942 4.9e-124 448.4 323 70.6
AT3G16310 Arabidopsis thaliana HOM05D004877 ORTHO05D005942 6.4e-124 448.0 334 69.2
CsaV3_7G035410 Cucumis sativus L. HOM05D004877 ORTHO05D005942 6.4e-124 448.0 334 69.8
Gorai.011G072600 Gossypium raimondii HOM05D004877 ORTHO05D005942 3.2e-123 445.7 329 66.6
Sabra01G0152700 Salix brachista HOM05D004877 ORTHO05D005942 3.5e-122 442.2 333 68.5
AL3G29060 Arabidopsis lyrata HOM05D004877 ORTHO05D005942 4.6e-122 441.8 334 68.3
MBI01_g42890_MAGBIO Magnolia biondii HOM05D004877 ORTHO05D005942 7.8e-122 441.0 336 67.6
Sed0013882 Sechium edule HOM05D004877 ORTHO05D005942 1.0e-121 440.7 331 70.1
MELO3C024450.2 Cucumis melo HOM05D004877 ORTHO05D005942 1.3e-121 440.3 334 68.6
Rhsim08G0226300 Rhododendron simsii HOM05D004877 ORTHO05D005942 8.7e-121 437.6 343 70.3
Carub.0003s1606 Capsella rubella HOM05D004877 ORTHO05D005942 1.1e-120 437.2 335 67.5
TAR624G0319 Trochodendron aralioides HOM05D004877 ORTHO05D005942 5.6e-120 434.9 331 68.9
BcaC05g28894 Brassica carinata HOM05D004877 ORTHO05D005942 1.3e-119 433.7 334 67.1
Aa31LG8G3450 Aethionema arabicum HOM05D004877 ORTHO05D005942 1.6e-119 433.3 330 66.7
BraA05t22146Z Brassica rapa HOM05D004877 ORTHO05D005942 2.1e-119 433.0 331 67.1
Gohir.A10G066900 Gossypium hirsutum HOM05D004877 ORTHO05D005942 2.8e-119 432.6 329 65.3
Nn8g39120 Nelumbo nucifera HOM05D004877 ORTHO05D005942 4.8e-119 431.8 353 64.9
Lj9A511G47 Lonicera japonica HOM05D004877 ORTHO05D005942 1.8e-118 429.9 342 68.1
CSS0036359 Camellia sinensis var. sinensis HOM05D004877 ORTHO05D005942 4.0e-118 428.7 340 68.5
Oeu001891.1 Olea europaea HOM05D004877 ORTHO05D005942 1.5e-117 426.8 334 67.4
MSTRG.22647 Avicennia marina HOM05D004877 ORTHO05D005942 2.0e-117 426.4 339 66.4
CARHR091520 Cardamine hirsuta HOM05D004877 ORTHO05D005942 2.6e-117 426.0 324 67.3
Aqoxy7G01469 Aquilegia oxysepala HOM05D004877 ORTHO05D005942 9.9e-117 424.1 333 64.9
C05p50190 Brassica napus HOM05D004877 ORTHO05D005942 1.3e-116 423.7 328 66.5
BolC5t33769H Brassica oleracea HOM05D004877 ORTHO05D005942 1.3e-116 423.7 328 66.5
BcaB06g25724 Brassica carinata HOM05D004877 ORTHO05D005942 2.9e-116 422.5 337 66.2
Gohir.D10G068000 Gossypium hirsutum HOM05D004877 ORTHO05D005942 2.9e-116 422.5 329 64.4
MSTRG.11036 Avicennia marina HOM05D004877 ORTHO05D005942 6.4e-116 421.4 339 67.6
SGA_v2.0_scaffold69G23330 Striga asiatica HOM05D004877 ORTHO05D005942 1.9e-115 419.9 338 65.7
arahy.Tifrunner.gnm1.ann1.NE95XN Arachis hypogaea HOM05D004877 ORTHO05D005942 1.2e-114 417.2 354 64.1
arahy.Tifrunner.gnm1.ann1.WG6QSW Arachis hypogaea HOM05D004877 ORTHO05D005942 1.2e-114 417.2 354 64.1
DCAR_016196 Daucus carota HOM05D004877 ORTHO05D005942 8.7e-113 411.0 340 65.3
Sed0014944 Sechium edule HOM05D004877 ORTHO05D005942 2.0e-109 399.8 332 64.2
PSO832G2273 Papaver somniferum HOM05D004877 ORTHO05D005942 2.9e-108 396.0 351 61.3
CDE05G3078 Ceratophyllum demersum HOM05D004877 ORTHO05D005942 8.4e-108 394.4 334 63.2
Lsat_1_v5_gn_4_99980 Lactuca sativa HOM05D004877 ORTHO05D005942 2.4e-107 392.9 355 60.8
PSO173G0077 Papaver somniferum HOM05D004877 ORTHO05D005942 6.0e-106 388.3 351 60.1
Cpa.g.c40702 Carica papaya HOM05D004877 ORTHO05D005942 2.3e-105 386.3 262 75.2
vmacro18867 Vaccinium macrocarpon HOM05D004877 ORTHO05D005942 7.4e-104 381.3 283 72.1
unitig_46.g18560 Utricularia gibba HOM05D004877 ORTHO05D005942 7.6e-101 371.3 341 58.9
Lj9A524G48 Lonicera japonica HOM05D004877 ORTHO05D005942 1.3e-100 370.5 357 60.8
ATR0705G205 Amborella trichopoda HOM05D004877 ORTHO05D005942 6.5e-100 368.2 340 57.6
CDE05G1429 Ceratophyllum demersum HOM05D004877 ORTHO05D005942 6.5e-100 368.2 332 59.3
HanXRQChr09g0275881 Helianthus annuus HOM05D004877 ORTHO05D005942 2.5e-99 366.3 359 59.3
unitig_37.g12259 Utricularia gibba HOM05D004877 ORTHO05D005942 7.1e-99 364.8 328 59.5
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 4.3e-88 328.9 327 56.0
Haze_15830 Corylus avellana HOM05D002410 ORTHO05D002805 2.2e-87 326.6 322 59.0
TAR624G1397 Trochodendron aralioides HOM05D004877 ORTHO05D005942 4.5e-85 318.9 228 70.6
Actinidia39142 Actinidia chinensis HOM05D004877 ORTHO05D005942 3.4e-77 292.7 245 65.7
Peaxi162Scf00894g00009 Petunia axillaris HOM05D004877 ORTHO05D005942 3.0e-73 279.6 210 68.6
HanXRQChr16g0501211 Helianthus annuus HOM05D004877 ORTHO05D005942 1.7e-71 273.9 351 46.4
Haze_15829 Corylus avellana HOM05D004877 ORTHO05D005942 1.0e-68 264.6 255 59.2
Migut.I00909 Erythranthe guttata HOM05D004877 ORTHO05D005942 1.4e-65 254.2 267 56.9
Peaxi162Scf11517g00001 Petunia axillaris HOM05D004877 ORTHO05D005942 1.8e-65 253.8 188 69.7
arahy.Tifrunner.gnm1.ann1.XV48AZ Arachis hypogaea HOM05D004877 ORTHO05D005942 6.7e-65 251.9 185 70.8
Pp3c5_15240 Physcomitrium patens HOM05D004877 ORTHO05D005942 4.5e-61 239.2 357 42.3
SEGI_39894 Sequoiadendron giganteum HOM05D004877 ORTHO05D005942 4.5e-61 239.2 379 43.3
Pp3c6_16260 Physcomitrium patens HOM05D004877 ORTHO05D005942 3.6e-58 229.6 346 41.9
Mapoly0014s0033 Marchantia polymorpha HOM05D004877 ORTHO05D005942 3.1e-54 216.5 354 43.8
Os01g0200500 Oryza sativa ssp. japonica HOM05D004877 ORTHO05D005942 3.8e-52 209.5 215 54.9
Zm00001eb337990 Zea mays HOM05D004877 ORTHO05D005942 1.9e-51 207.2 346 41.6
HPP92_002859 Vanilla planifolia HOM05D004877 ORTHO05D005942 9.8e-48 194.9 223 51.6
SMO144G0168 Selaginella moellendorffii HOM05D004877 ORTHO05D005942 1.7e-44 184.1 176 52.3
Zm00001eb293750 Zea mays HOM05D004877 ORTHO05D005942 1.9e-43 180.6 351 38.7
Os05g0520100 Oryza sativa ssp. japonica HOM05D004877 ORTHO05D005942 3.9e-36 156.4 379 34.6
AagrBONN_evm.TU.Sc2ySwM_117.2493 Anthoceros agrestis HOM05D004877 ORTHO05D005942 3.1e-33 146.7 337 35.9
Nn2g11613 Nelumbo nucifera HOM05D004877 ORTHO05D005942 6.4e-31 139.0 116 65.5
Zm00001eb353450 Zea mays HOM05D004877 ORTHO05D005942 1.2e-29 134.8 362 33.1
CBR_g44943 Chara braunii HOM05D004877 ORTHO05D005942 3.3e-27 126.7 147 47.6
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 7.5e-24 115.5 106 51.9
PSO675G8939 Papaver somniferum HOM05D004877 ORTHO05D005942 1.1e-22 111.7 91 59.3
Nn5g29960 Nelumbo nucifera HOM05D004877 ORTHO05D005942 2.7e-21 107.1 101 57.4
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 7.8e-21 105.5 87 56.3
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 1.3e-20 104.8 85 61.2
SEGI_33810 Sequoiadendron giganteum HOM05D004877 ORTHO05D000002 3.9e-20 103.2 117 51.3
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 1.1e-19 101.7 81 56.8
Cre12.g553050 Chlamydomonas reinhardtii HOM05D004877 ORTHO05D005942 6.8e-17 92.4 148 34.5
PRCOL_00002288 Prasinoderma coloniale HOM05D004877 ORTHO05D005942 3.4e-16 90.1 234 29.9
MD07G1258000 Malus domestica HOM05D004877 ORTHO05D005942 3.7e-15 86.7 55 74.5
TAR629G0138 Trochodendron aralioides HOM05D004753 ORTHO05D005920 3.7e-15 86.7 80 60.0
MD16G1217600 Malus domestica HOM05D004877 ORTHO05D005942 1.3e-12 78.2 70 54.3
Cpa.g.c43067 Carica papaya HOM05D004877 ORTHO05D005942 1.7e-12 77.8 41 82.9
TAR624G1091 Trochodendron aralioides HOM05D004877 ORTHO05D005942 1.7e-12 77.8 58 67.2
MCO07G475 Micromonas commoda HOM05D004877 ORTHO05D005942 1.1e-09 68.6 171 29.2
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 3.1e-09 67.0 53 56.6
Pp3c1_40780 Physcomitrium patens HOM05D004877 ORTHO05D005942 2.0e-08 64.3 119 37.0


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