Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia28933 Actinidia chinensis HOM05D001724 ORTHO05D002973 1.4e-56 222.6 106 100.0
Actinidia04999 Actinidia chinensis HOM05D001724 ORTHO05D002973 2.3e-11 72.4 127 40.2
GSVIVG01014694001 Vitis vinifera HOM05D001724 ORTHO05D002973 8.9e-11 70.5 139 38.1
Dinv10340 Davidia involucrata HOM05D001724 ORTHO05D002973 2.6e-10 68.9 127 38.6
Rhsim06G0230400 Rhododendron simsii HOM05D001724 ORTHO05D002973 9.9e-10 67.0 127 37.8
MD11G1030900 Malus domestica HOM05D001724 ORTHO05D002973 1.9e-08 62.8 127 35.4
TAR629G2285 Trochodendron aralioides HOM05D001724 ORTHO05D002973 2.4e-08 62.4 35 74.3
Thecc.07G012700 Theobroma cacao HOM05D001724 ORTHO05D002973 3.2e-08 62.0 69 47.8
Lj1A891G67 Lonicera japonica HOM05D001724 ORTHO05D002973 4.1e-08 61.6 35 71.4
Nitab4.5_0002736g0010 Nicotiana tabacum HOM05D001724 ORTHO05D002973 4.1e-08 61.6 127 36.2
Ah.06g181460 Amaranthus hybridus HOM05D001724 ORTHO05D002973 7.1e-08 60.8 35 68.6
MD03G1026900 Malus domestica HOM05D001724 ORTHO05D002973 7.1e-08 60.8 139 34.5
Hund20648 Selenicereus undatus HOM05D001724 ORTHO05D002973 7.1e-08 60.8 51 54.9
Cc05_g14990 Coffea canephora HOM05D001724 ORTHO05D002973 9.2e-08 60.5 127 35.4
QL08p003988 Quercus lobata HOM05D001724 ORTHO05D002973 9.2e-08 60.5 35 71.4
vmacro11595 Vaccinium macrocarpon HOM05D001724 ORTHO05D002973 9.2e-08 60.5 35 74.3
Aqoxy1G04266 Aquilegia oxysepala HOM05D001724 ORTHO05D002973 1.2e-07 60.1 35 68.6
COL.COLO4_09841 Corchorus olitorius HOM05D001724 ORTHO05D002973 1.2e-07 60.1 35 71.4
Hma1.2p1_1094F.1_g256485 Hydrangea macrophylla HOM05D001724 ORTHO05D002973 1.2e-07 60.1 51 60.8
EL10Ac4g07558 Beta vulgaris HOM05D001724 ORTHO05D002973 1.6e-07 59.7 35 71.4
FvH4_3g42970 Fragaria vesca HOM05D001724 ORTHO05D002973 1.6e-07 59.7 35 68.6
Cfa020185 Carpinus fangiana HOM05D001724 ORTHO05D007284 2.1e-07 59.3 34 70.6
PGSC0003DMG400022169 Solanum tuberosum HOM05D001724 ORTHO05D002973 2.1e-07 59.3 127 36.2
CsaV3_3G004220 Cucumis sativus L. HOM05D001724 ORTHO05D002973 2.7e-07 58.9 49 61.2
Solyc07g065620.4 Solanum lycopersicum HOM05D001724 ORTHO05D002973 2.7e-07 58.9 127 35.4
Sopen07g033830 Solanum pennellii HOM05D001724 ORTHO05D002973 2.7e-07 58.9 127 35.4
ClCG10G004430 Citrullus lanatus HOM05D001724 ORTHO05D002973 3.5e-07 58.5 49 61.2
Ciclev10007611m.g Citrus clementina HOM05D001724 ORTHO05D002973 3.5e-07 58.5 35 68.6
FAN25G1954 Fragaria x ananassa HOM05D001724 ORTHO05D002973 3.5e-07 58.5 35 68.6
TWI39G0509 Tripterygium wilfordii HOM05D001724 ORTHO05D002973 3.5e-07 58.5 70 48.6
Atru.chr2.3696 Acer truncatum HOM05D001724 ORTHO05D002973 4.6e-07 58.2 35 71.4
MELO3C014116.2 Cucumis melo HOM05D001724 ORTHO05D002973 4.6e-07 58.2 49 61.2
Nn3g20983 Nelumbo nucifera HOM05D001724 ORTHO05D002973 6.0e-07 57.8 126 33.3
Prupe.6G024200 Prunus persica HOM05D001724 ORTHO05D002973 6.0e-07 57.8 132 33.3
Gohir.A01G091900 Gossypium hirsutum HOM05D001724 ORTHO05D002973 7.8e-07 57.4 35 71.4
Gohir.D01G062100 Gossypium hirsutum HOM05D001724 ORTHO05D002973 7.8e-07 57.4 35 71.4
Gorai.002G100700 Gossypium raimondii HOM05D001724 ORTHO05D002973 7.8e-07 57.4 35 71.4
MSTRG.13022 Avicennia marina HOM05D001724 ORTHO05D002973 1.0e-06 57.0 127 34.6
HanXRQChr11g0334101 Helianthus annuus HOM05D001724 ORTHO05D002973 1.0e-06 57.0 127 32.3
Nitab4.5_0007415g0040 Nicotiana tabacum HOM05D001724 ORTHO05D002973 1.0e-06 57.0 127 35.4
Peaxi162Scf00139g01315 Petunia axillaris HOM05D001724 ORTHO05D002973 1.0e-06 57.0 127 35.4
Lsat_1_v5_gn_7_114340 Lactuca sativa HOM05D001724 ORTHO05D002973 1.3e-06 56.6 139 33.1
Potri.001G368401 Populus trichocarpa HOM05D001724 ORTHO05D002973 1.3e-06 56.6 33 66.7
QL08p003981 Quercus lobata HOM05D001724 ORTHO05D002973 1.3e-06 56.6 35 68.6
FAN21G0081 Fragaria x ananassa HOM05D001724 ORTHO05D002973 2.3e-06 55.8 35 65.7
CAN.G623.15 Capsicum annuum HOM05D001724 ORTHO05D002973 3.0e-06 55.5 127 33.9
RcHm_v2.0_Chr5g0077021 Rosa chinensis HOM05D001724 ORTHO05D002973 3.0e-06 55.5 35 65.7
Thhalv10011283m.g Eutrema salsugineum HOM05D001724 ORTHO05D002973 3.9e-06 55.1 59 45.8
Migut.H01753 Erythranthe guttata HOM05D001724 ORTHO05D002973 5.1e-06 54.7 35 71.4
FAN11G2634 Fragaria x ananassa HOM05D001724 ORTHO05D002973 8.6e-06 53.9 30 73.3


User provided reference genes

Program Settings