Gene: PGSC0003DMG400022169

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400022169
  • Transcript Identifier PGSC0003DMT400057049
  • Gene Type Coding gene
  • Location ST4.03ch07 : 55656143-55660775 : negative

Gene Family Information

  • ID HOM05D001724
  • #Genes/#Species 375/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37434530
  • id PGSC0003DMG400022169.v4.03
  • uniprot M1C0A1

Descriptions

  • Description Poly(A)-specific ribonuclease PARN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic
GO:0009651
IEA
GOA Databaseresponse to salt stress
GO:0009737
IEA
GOA Databaseresponse to abscisic acid
GO:0009751
IEA
GOA Databaseresponse to salicylic acid
GO:0006970
IEA
GOA Databaseresponse to osmotic stress

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0000175
IBA
GOA Database3'-5'-exoribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR006941 Ribonuclease CAF1
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
16.4.2.1.1 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.poly(A)-specific ribonuclease (PARN)