Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia07110 Actinidia chinensis HOM05D003658 ORTHO05D004457 3.1e-229 798.1 402 100.0
MBI17_g43655_MAGBIO Magnolia biondii HOM05D003658 ORTHO05D004457 4.1e-181 638.3 367 89.6
Actinidia03749 Actinidia chinensis HOM05D003658 ORTHO05D004457 2.6e-180 635.6 367 89.1
CSS0000103 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 4.5e-180 634.8 368 89.9
CSS0002392 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 4.5e-180 634.8 368 89.9
CSS0031195 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 7.7e-180 634.0 367 89.9
CSS0048503 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 2.2e-179 632.5 367 89.6
Nn3g19734 Nelumbo nucifera HOM05D003658 ORTHO05D004457 1.9e-178 629.4 367 88.6
TAR369G0890 Trochodendron aralioides HOM05D003658 ORTHO05D004457 1.9e-178 629.4 367 88.3
TAR623G0185 Trochodendron aralioides HOM05D003658 ORTHO05D004457 1.9e-178 629.4 367 88.6
CsaV3_7G021350 Cucumis sativus L. HOM05D003658 ORTHO05D004457 5.5e-178 627.9 367 88.8
Thecc.07G099900 Theobroma cacao HOM05D003658 ORTHO05D004457 7.2e-178 627.5 367 88.6
Cc10_g16400 Coffea canephora HOM05D003658 ORTHO05D004457 9.4e-178 627.1 367 88.0
MELO3C013218.2 Cucumis melo HOM05D003658 ORTHO05D004457 1.2e-177 626.7 367 89.1
MD11G1125100 Malus domestica HOM05D003658 ORTHO05D004457 2.1e-177 625.9 367 88.0
Nn2g13001 Nelumbo nucifera HOM05D003658 ORTHO05D004457 2.1e-177 625.9 368 88.6
Prupe.6G093800 Prunus persica HOM05D003658 ORTHO05D004457 2.1e-177 625.9 367 87.7
RcHm_v2.0_Chr2g0124141 Rosa chinensis HOM05D003658 ORTHO05D004457 2.1e-177 625.9 367 87.7
FvH4_1g25660 Fragaria vesca HOM05D003658 ORTHO05D004457 3.6e-177 625.2 367 87.7
SGA_v2.0_scaffold19G08651 Striga asiatica HOM05D003658 ORTHO05D004457 3.6e-177 625.2 367 87.7
RcHm_v2.0_Chr7g0219181 Rosa chinensis HOM05D003658 ORTHO05D004457 4.7e-177 624.8 367 88.0
MSTRG.22380 Avicennia marina HOM05D003658 ORTHO05D004457 6.1e-177 624.4 367 87.2
COL.COLO4_32786 Corchorus olitorius HOM05D003658 ORTHO05D004457 7.9e-177 624.0 367 88.3
Oeu046772.1 Olea europaea HOM05D003658 ORTHO05D004457 7.9e-177 624.0 367 88.0
THA.LOC104800615 Tarenaya hassleriana HOM05D003658 ORTHO05D004457 7.9e-177 624.0 367 87.5
Sed0019661 Sechium edule HOM05D003658 ORTHO05D004457 1.0e-176 623.6 367 88.3
CARHR029540 Cardamine hirsuta HOM05D003658 ORTHO05D004457 1.8e-176 622.9 367 86.9
Sp1g25780 Schrenkiella parvula HOM05D003658 ORTHO05D004457 1.8e-176 622.9 367 86.4
AT1G29900 Arabidopsis thaliana HOM05D003658 ORTHO05D004457 2.3e-176 622.5 367 86.9
PGR031G3879 Punica granatum HOM05D003658 ORTHO05D004457 2.3e-176 622.5 367 87.7
Ciclev10027703m.g Citrus clementina HOM05D003658 ORTHO05D004457 3.0e-176 622.1 367 87.5
MD03G1111400 Malus domestica HOM05D003658 ORTHO05D004457 3.0e-176 622.1 367 87.5
DCAR_016522 Daucus carota HOM05D003658 ORTHO05D004457 5.1e-176 621.3 369 87.3
Duzib213G0488 Durio zibethinus HOM05D003658 ORTHO05D004457 5.1e-176 621.3 367 87.2
PGSC0003DMG400007504 Solanum tuberosum HOM05D003658 ORTHO05D004457 5.1e-176 621.3 367 87.7
AL1G43750 Arabidopsis lyrata HOM05D003658 ORTHO05D004457 6.7e-176 620.9 367 86.4
Thhalv10006598m.g Eutrema salsugineum HOM05D003658 ORTHO05D004457 6.7e-176 620.9 367 86.4
Lalb_Chr24g0394441 Lupinus albus HOM05D003658 ORTHO05D004457 6.7e-176 620.9 374 85.0
Gohir.A01G060300 Gossypium hirsutum HOM05D003658 ORTHO05D004457 8.8e-176 620.5 366 87.2
THA.LOC104826356 Tarenaya hassleriana HOM05D003658 ORTHO05D004457 8.8e-176 620.5 367 86.6
CDE02G3705 Ceratophyllum demersum HOM05D003658 ORTHO05D004457 1.5e-175 619.8 367 87.5
Duzib170G0243 Durio zibethinus HOM05D003658 ORTHO05D004457 1.5e-175 619.8 367 87.2
MBI17_g19523_MAGBIO Magnolia biondii HOM05D003658 ORTHO05D004457 1.5e-175 619.8 367 88.0
TWI31G0613 Tripterygium wilfordii HOM05D003658 ORTHO05D004457 2.0e-175 619.4 368 87.0
Gohir.D01G046800 Gossypium hirsutum HOM05D003658 ORTHO05D004457 2.6e-175 619.0 367 87.7
Gorai.002G066300 Gossypium raimondii HOM05D003658 ORTHO05D004457 2.6e-175 619.0 367 87.7
Lalb_Chr14g0374811 Lupinus albus HOM05D003658 ORTHO05D004457 2.6e-175 619.0 374 85.3
Lalb_Chr22g0350161 Lupinus albus HOM05D003658 ORTHO05D004457 2.6e-175 619.0 374 85.3
Sopen06g031760 Solanum pennellii HOM05D003658 ORTHO05D004457 2.6e-175 619.0 367 87.2
EL10Ac1g00972 Beta vulgaris HOM05D003658 ORTHO05D004457 3.3e-175 618.6 374 85.0
Solyc06g075340.4 Solanum lycopersicum HOM05D003658 ORTHO05D004457 3.3e-175 618.6 367 87.2
ECA234G0865 Erigeron canadensis HOM05D003658 ORTHO05D004457 4.4e-175 618.2 367 86.4
Hund30148 Selenicereus undatus HOM05D003658 ORTHO05D004457 4.4e-175 618.2 367 86.4
Hund30149 Selenicereus undatus HOM05D003658 ORTHO05D004457 4.4e-175 618.2 367 86.4
Migut.N03234 Erythranthe guttata HOM05D003658 ORTHO05D004457 5.7e-175 617.8 367 85.8
QL01p036935 Quercus lobata HOM05D003658 ORTHO05D004457 5.7e-175 617.8 369 86.7
Carub.0001s2812 Capsella rubella HOM05D003658 ORTHO05D004457 7.4e-175 617.5 367 86.4
Eucgr.F04457 Eucalyptus grandis HOM05D003658 ORTHO05D004457 7.4e-175 617.5 367 88.0
Sed0011385 Sechium edule HOM05D003658 ORTHO05D004457 7.4e-175 617.5 367 87.5
CDE08G0949 Ceratophyllum demersum HOM05D003658 ORTHO05D004457 9.7e-175 617.1 367 86.6
Manes.04G025400 Manihot esculenta HOM05D003658 ORTHO05D004457 9.7e-175 617.1 366 85.5
arahy.Tifrunner.gnm1.ann1.HT4L1Y Arachis hypogaea HOM05D003658 ORTHO05D004457 1.3e-174 616.7 374 85.3
arahy.Tifrunner.gnm1.ann1.Z66RMF Arachis hypogaea HOM05D003658 ORTHO05D004457 1.3e-174 616.7 374 85.3
CANSAT35G1266 Cannabis sativa HOM05D003658 ORTHO05D004457 1.3e-174 616.7 375 86.1
PSO782G2702 Papaver somniferum HOM05D003658 ORTHO05D004457 1.7e-174 616.3 367 87.2
Aqoxy7G00983 Aquilegia oxysepala HOM05D003658 ORTHO05D004457 2.2e-174 615.9 367 86.4
Aa31LG4G17270 Aethionema arabicum HOM05D003658 ORTHO05D004457 2.8e-174 615.5 367 86.4
FAN26G3193 Fragaria x ananassa HOM05D003658 ORTHO05D004457 2.8e-174 615.5 367 87.2
FAN28G2851 Fragaria x ananassa HOM05D003658 ORTHO05D004457 2.8e-174 615.5 367 87.5
unitig_8.g4304 Utricularia gibba HOM05D003658 ORTHO05D004457 2.8e-174 615.5 367 86.1
BcaB07g32573 Brassica carinata HOM05D003658 ORTHO05D004457 3.7e-174 615.1 367 85.6
Atru.chr3.3712 Acer truncatum HOM05D003658 ORTHO05D004457 4.8e-174 614.8 367 86.6
BcaC05g27003 Brassica carinata HOM05D003658 ORTHO05D004457 4.8e-174 614.8 367 85.6
C05p28660 Brassica napus HOM05D003658 ORTHO05D004457 4.8e-174 614.8 367 85.6
BolC5t31587H Brassica oleracea HOM05D003658 ORTHO05D004457 4.8e-174 614.8 367 85.6
Cfa011371 Carpinus fangiana HOM05D003658 ORTHO05D004457 4.8e-174 614.8 367 85.3
CiPaw.13G106400 Carya illinoinensis HOM05D003658 ORTHO05D004457 6.3e-174 614.4 367 86.4
HanXRQChr15g0493841 Helianthus annuus HOM05D003658 ORTHO05D004457 6.3e-174 614.4 367 85.8
TWI75G0848 Tripterygium wilfordii HOM05D003658 ORTHO05D004457 6.3e-174 614.4 368 86.4
A09p36600 Brassica napus HOM05D003658 ORTHO05D004457 1.1e-173 613.6 367 85.3
BraA09t39180Z Brassica rapa HOM05D003658 ORTHO05D004457 1.1e-173 613.6 367 85.3
ClCG09G021680 Citrullus lanatus HOM05D003658 ORTHO05D004457 1.1e-173 613.6 370 87.6
HanXRQChr09g0251621 Helianthus annuus HOM05D003658 ORTHO05D004457 1.1e-173 613.6 367 85.6
MSTRG.24196 Avicennia marina HOM05D003658 ORTHO05D004457 1.4e-173 613.2 367 85.8
AUR62004284 Chenopodium quinoa HOM05D003658 ORTHO05D004457 1.4e-173 613.2 374 84.0
Peaxi162Scf00072g00510 Petunia axillaris HOM05D003658 ORTHO05D004457 1.8e-173 612.8 372 86.0
arahy.Tifrunner.gnm1.ann1.1XIG7Z Arachis hypogaea HOM05D003658 ORTHO05D004457 4.1e-173 611.7 374 84.2
AUR62033373 Chenopodium quinoa HOM05D003658 ORTHO05D004457 7.0e-173 610.9 375 84.0
Nitab4.5_0000106g0020 Nicotiana tabacum HOM05D003658 ORTHO05D004457 7.0e-173 610.9 385 84.2
arahy.Tifrunner.gnm1.ann1.F0P9EH Arachis hypogaea HOM05D003658 ORTHO05D004457 9.1e-173 610.5 370 85.4
arahy.Tifrunner.gnm1.ann1.SY27G3 Arachis hypogaea HOM05D003658 ORTHO05D004457 9.1e-173 610.5 374 84.5
DCAR_026092 Daucus carota HOM05D003658 ORTHO05D004457 1.6e-172 609.8 367 86.1
Lj4A607T48 Lonicera japonica HOM05D003658 ORTHO05D004457 2.0e-172 609.4 377 84.1
ATR0561G124 Amborella trichopoda HOM05D003658 ORTHO05D004457 2.6e-172 609.0 367 86.1
Haze_23933 Corylus avellana HOM05D003658 ORTHO05D004457 2.6e-172 609.0 376 84.6
Lj3g0017853 Lotus japonicus HOM05D003658 ORTHO05D004457 1.0e-171 607.1 367 84.7
Nitab4.5_0010960g0010 Nicotiana tabacum HOM05D003658 ORTHO05D004457 1.3e-171 606.7 367 87.2
Glyma.13G328600 Glycine max HOM05D003658 ORTHO05D004457 1.7e-171 606.3 367 85.0
Phvul.005G137400 Phaseolus vulgaris HOM05D003658 ORTHO05D004457 3.8e-171 605.1 369 84.8
Sc12g0008310 Simmondsia chinensis HOM05D003658 ORTHO05D004457 5.0e-171 604.7 374 84.0
VMungo1080G1458 Vigna mungo HOM05D003658 ORTHO05D004457 8.5e-171 604.0 367 85.0
Ca_01436_v3 Cicer arietinum L. HOM05D003658 ORTHO05D004457 1.1e-170 603.6 369 85.4
Medtr2g093280 Medicago truncatula HOM05D003658 ORTHO05D004457 2.5e-170 602.4 369 85.1
Ah.05g175890 Amaranthus hybridus HOM05D003658 ORTHO05D004457 1.6e-169 599.7 364 84.1
Lsat_1_v5_gn_9_7920 Lactuca sativa HOM05D003658 ORTHO05D004457 1.6e-169 599.7 367 84.5
HPP92_005503 Vanilla planifolia HOM05D003658 ORTHO05D004457 1.6e-169 599.7 367 83.1
Potri.010G023100 Populus trichocarpa HOM05D003658 ORTHO05D004457 8.0e-169 597.4 369 84.3
Glyma.15G045100 Glycine max HOM05D003658 ORTHO05D004457 1.8e-168 596.3 374 82.4
vmacro14471 Vaccinium macrocarpon HOM05D003658 ORTHO05D004457 1.8e-168 596.3 432 75.5
Rhsim01G0220800 Rhododendron simsii HOM05D003658 ORTHO05D004457 2.3e-168 595.9 426 76.1
SMO116G0226 Selaginella moellendorffii HOM05D003658 ORTHO05D004457 3.0e-168 595.5 371 82.2
Psat5g277200 Pisum sativum HOM05D003658 ORTHO05D004457 3.3e-167 592.0 374 83.4
Mapoly0126s0034 Marchantia polymorpha HOM05D003658 ORTHO05D004457 9.7e-167 590.5 367 82.6
Pp3c1_18250 Physcomitrium patens HOM05D003658 ORTHO05D004457 1.4e-165 586.6 367 82.3
Sabra10G0015500 Salix brachista HOM05D003658 ORTHO05D004457 3.1e-165 585.5 369 83.7
CBR_g16075 Chara braunii HOM05D003658 ORTHO05D004457 4.5e-164 581.6 374 79.7
Zm00001eb160030 Zea mays HOM05D003658 ORTHO05D004457 3.8e-163 578.6 374 79.1
Zm00001eb356970 Zea mays HOM05D003658 ORTHO05D004457 1.5e-162 576.6 374 78.9
Pp3c2_19430 Physcomitrium patens HOM05D003658 ORTHO05D004457 2.5e-162 575.9 367 79.8
AagrBONN_evm.TU.Sc2ySwM_228.578 Anthoceros agrestis HOM05D003658 ORTHO05D004457 2.7e-161 572.4 367 80.1
arahy.Tifrunner.gnm1.ann1.YNZQ4S Arachis hypogaea HOM05D003658 ORTHO05D004457 1.8e-160 569.7 374 80.2
SHI06033 Sapria himalayana HOM05D003658 ORTHO05D004457 2.2e-158 562.8 373 79.4
TPR.G11612 Trifolium pratense HOM05D003658 ORTHO05D004457 2.0e-156 556.2 352 83.0
Dinv32798 Davidia involucrata HOM05D003658 ORTHO05D004457 1.6e-153 546.6 361 80.9
PRCOL_00001523 Prasinoderma coloniale HOM05D003658 ORTHO05D004457 2.3e-152 542.7 370 75.4
CAN.G1001.10 Capsicum annuum HOM05D003658 ORTHO05D004457 3.4e-151 538.9 290 94.1
Nn2g10669 Nelumbo nucifera HOM05D003658 ORTHO05D004457 1.4e-149 533.5 294 91.8
MCO07G210 Micromonas commoda HOM05D003658 ORTHO05D004457 5.9e-148 528.1 367 74.9
Cfa011369 Carpinus fangiana HOM05D003658 ORTHO05D004457 3.8e-147 525.4 290 90.7
Cre08.g358580 Chlamydomonas reinhardtii HOM05D003658 ORTHO05D004457 9.8e-143 510.8 366 73.2
Nitab4.5_0000816g0110 Nicotiana tabacum HOM05D003658 ORTHO05D004457 6.6e-139 498.0 367 74.7
GSVIVG01025125001 Vitis vinifera HOM05D003658 ORTHO05D004457 8.0e-137 491.1 367 73.6
Zm00001eb440860 Zea mays HOM05D003658 ORTHO05D004457 2.0e-135 486.5 307 81.1
Nitab4.5_0010336g0040 Nicotiana tabacum HOM05D003658 ORTHO05D004457 1.4e-133 480.3 302 83.8
Oeu047812.2 Olea europaea HOM05D003658 ORTHO05D004457 3.2e-133 479.2 367 72.5
SalBow6G4004 Salvia bowleyana HOM05D003658 ORTHO05D004457 5.2e-120 435.3 367 65.9
Haze_26994 Corylus avellana HOM05D003658 ORTHO05D004457 1.0e-115 421.0 373 60.1
Actinidia24075 Actinidia chinensis HOM05D003658 ORTHO05D004457 9.3e-109 397.9 355 64.5
MD12G1166200 Malus domestica HOM05D003658 ORTHO05D004457 5.8e-103 378.6 230 83.5
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 2.3e-99 366.7 319 56.4
Glyma.20G148821 Glycine max HOM05D003658 ORTHO05D004457 8.4e-86 321.6 190 83.7
Cfa022738 Carpinus fangiana HOM05D003658 ORTHO05D004457 1.2e-84 317.8 330 49.4
Haze_26134 Corylus avellana HOM05D003658 ORTHO05D004457 4.8e-81 305.8 351 46.2
Cpa.g.sc81.16 Carica papaya HOM05D003658 ORTHO05D004457 2.8e-73 280.0 609 35.6
Peaxi162Scf00809g00417 Petunia axillaris HOM05D003658 ORTHO05D004457 1.8e-72 277.3 366 50.5
ATR0609G052 Amborella trichopoda HOM05D003658 ORTHO05D004457 2.5e-53 213.8 120 87.5
Dinv14502 Davidia involucrata HOM05D003658 ORTHO05D004457 7.5e-42 175.6 92 93.5
TAR633G0489 Trochodendron aralioides HOM05D003658 ORTHO05D004457 4.1e-40 169.9 100 86.0
CAN.G1001.11 Capsicum annuum HOM05D003658 ORTHO05D004457 2.0e-39 167.5 444 29.7
Haze_26812 Corylus avellana HOM05D003658 ORTHO05D004457 2.0e-34 151.0 318 31.1
Sc12g0005830 Simmondsia chinensis HOM05D003658 ORTHO05D004457 2.0e-34 151.0 189 50.3
TAR633G2225 Trochodendron aralioides HOM05D003658 ORTHO05D004457 5.9e-23 112.8 90 70.0
Aqoxy84s009 Aquilegia oxysepala HOM05D003658 ORTHO05D004457 3.3e-21 107.1 109 53.2
CAN.G916.7 Capsicum annuum HOM05D003658 ORTHO05D003835 8.0e-20 102.4 58 87.9
Os01g0570700 Oryza sativa ssp. japonica HOM05D003658 ORTHO05D004457 9.2e-16 89.0 181 32.0
Dinv14501 Davidia involucrata HOM05D003658 ORTHO05D004457 1.3e-14 85.1 78 61.5
Glyma.20G148741 Glycine max HOM05D003658 ORTHO05D004457 5.0e-14 83.2 155 32.9
Lj4C607T13 Lonicera japonica HOM05D003658 ORTHO05D004457 1.1e-13 82.0 145 31.7
CAN.G185.26 Capsicum annuum HOM05D000875 ORTHO05D000684 2.8e-12 77.4 52 76.9
Lj4C607T5 Lonicera japonica HOM05D003658 ORTHO05D004457 1.4e-11 75.1 133 31.6
TAR633G2601 Trochodendron aralioides HOM05D003658 ORTHO05D004457 2.3e-11 74.3 153 32.0
Sc12g0005820 Simmondsia chinensis HOM05D003658 ORTHO05D004457 4.0e-11 73.6 81 49.4
SEGI_13014 Sequoiadendron giganteum HOM05D003658 ORTHO05D037587 2.0e-10 71.2 56 69.6
Aqoxy7G00992 Aquilegia oxysepala HOM05D003658 ORTHO05D004457 4.4e-10 70.1 152 28.3
Nn3g17258 Nelumbo nucifera HOM05D003658 ORTHO05D004457 5.8e-10 69.7 50 72.0
TAR636G1956 Trochodendron aralioides HOM05D003658 ORTHO05D415344 7.1e-08 62.8 39 79.5
MD03G1111500 Malus domestica HOM05D003658 ORTHO05D004457 3.5e-07 60.5 222 28.8
Cc01_g11620 Coffea canephora HOM05D003658 ORTHO05D004457 1.7e-06 58.2 72 47.2


User provided reference genes

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