Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31csc39G130 Aethionema arabicum HOM05D000216 ORTHO05D000634 4.3e-78 294.7 155 100.0
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 4.5e-27 125.2 203 47.8
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 4.5e-27 125.2 203 47.8
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 4.5e-27 125.2 203 47.8
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 4.5e-27 125.2 203 47.8
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 7.6e-27 124.4 200 49.0
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.3e-21 107.1 177 42.9
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.5e-19 100.1 207 42.0
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.3e-18 97.1 192 39.6
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.9e-18 95.9 203 38.9
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 3.8e-18 95.5 201 39.3
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-18 94.4 199 38.2
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-18 94.4 198 38.4
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-18 94.4 199 38.2
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-18 94.4 199 38.2
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-18 94.4 199 38.2
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-18 94.4 199 38.2
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-18 94.4 199 38.2
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-18 94.4 199 38.2
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.2e-17 92.4 180 41.1
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.2e-16 90.5 200 37.0
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 4.6e-16 88.6 134 49.3
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 6.1e-16 88.2 203 37.4
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.8e-15 86.7 203 35.5
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 2.3e-15 86.3 97 54.6
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 6.7e-15 84.7 203 36.9
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.7e-15 84.7 203 34.5
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.7e-15 84.7 203 34.5
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.7e-15 84.7 203 34.5
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.7e-15 84.7 203 34.5
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.7e-15 84.7 203 34.5
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 8.7e-15 84.3 204 35.8
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 1.1e-14 84.0 204 35.8
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.9e-14 83.2 203 36.5
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 5.7e-14 81.6 203 34.5
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 9.7e-14 80.9 203 35.5
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.8e-13 78.6 165 38.2
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 4.1e-12 75.5 90 57.8
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-12 74.3 142 41.5
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.2e-11 73.9 134 42.5
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-11 72.4 153 37.3
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.5e-11 72.0 136 41.2
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.5e-11 72.0 136 41.2
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 4.5e-11 72.0 171 33.9
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-10 70.1 150 37.3
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-10 70.1 150 37.3
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.7e-10 70.1 203 35.0
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 2.5e-09 66.2 170 37.1
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 3.2e-09 65.9 185 35.7
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 7.2e-09 64.7 197 31.5
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 7.2e-09 64.7 197 31.5
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 7.2e-09 64.7 197 31.5
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.2e-08 63.9 184 37.0
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 1.2e-08 63.9 166 33.7
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.6e-08 63.5 135 37.8
MELO3C000330.2 Cucumis melo HOM05D000216 ORTHO05D000634 2.1e-08 63.2 134 37.3
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 4.6e-08 62.0 194 31.4
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 6.1e-08 61.6 214 30.8
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 8.8e-07 57.8 213 32.4
Peaxi162Scf00348g01211 Petunia axillaris HOM05D000216 ORTHO05D000634 1.5e-06 57.0 73 46.6
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-06 57.0 89 42.7
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 2.0e-06 56.6 197 30.5


User provided reference genes

Program Settings