Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 0.0e+00 1105.9 591 100.0
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 3.2e-219 765.4 591 75.5
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 4.7e-218 761.5 580 75.5
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 1.7e-215 753.1 635 70.1
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.0e-212 743.8 580 74.0
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 3.3e-211 738.8 581 72.6
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 5.5e-211 738.0 579 73.7
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 5.5e-211 738.0 579 73.7
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 1.0e-209 733.8 579 73.2
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.7e-204 716.5 578 72.7
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 5.0e-204 714.9 580 72.8
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 3.6e-194 682.2 579 70.8
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 4.7e-194 681.8 578 70.8
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 3.2e-190 669.1 580 64.7
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 2.0e-176 623.2 570 65.4
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 2.4e-169 599.7 583 62.4
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 2.1e-165 586.6 573 62.5
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 7.3e-163 578.2 580 60.2
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 1.2e-157 560.8 576 58.9
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 6.1e-141 505.4 605 51.2
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 3.7e-138 496.1 593 48.6
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 3.4e-136 489.6 590 52.0
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 1.7e-135 487.3 509 57.2
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 2.9e-135 486.5 505 55.2
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 8.5e-135 485.0 591 47.9
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 9.4e-134 481.5 601 50.2
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 3.0e-132 476.5 506 54.9
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 3.0e-132 476.5 506 54.9
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 5.7e-131 472.2 627 46.1
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 7.4e-131 471.9 506 58.1
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 7.4e-131 471.9 603 48.9
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 2.2e-130 470.3 608 50.2
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 8.2e-130 468.4 506 58.1
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 8.2e-130 468.4 596 48.2
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 5.3e-129 465.7 595 51.3
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 2.6e-128 463.4 610 46.2
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 7.7e-128 461.8 406 65.8
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 1.4e-126 457.6 590 51.0
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 1.6e-125 454.1 430 58.8
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 2.7e-125 453.4 592 49.5
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 1.0e-124 451.4 599 49.1
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 1.4e-124 451.1 603 47.8
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 3.9e-124 449.5 539 48.8
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 3.9e-124 449.5 625 46.2
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 1.1e-123 448.0 610 47.9
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 2.0e-123 447.2 596 50.5
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 3.3e-123 446.4 595 49.2
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 5.7e-123 445.7 608 49.5
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 4.8e-122 442.6 596 50.5
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 1.1e-121 441.4 599 50.3
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 1.6e-120 437.6 663 44.8
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 1.3e-119 434.5 711 45.0
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 3.8e-119 433.0 562 50.0
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 8.5e-119 431.8 587 48.6
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 9.4e-118 428.3 690 44.1
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 6.1e-117 425.6 559 45.1
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 8.0e-117 425.2 601 43.8
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 8.0e-117 425.2 412 57.3
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 3.0e-116 423.3 634 47.5
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 2.0e-115 420.6 422 57.8
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 2.6e-115 420.2 608 44.9
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 5.7e-115 419.1 612 44.4
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 7.5e-115 418.7 618 43.2
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 2.8e-114 416.8 319 63.3
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 4.8e-114 416.0 365 58.6
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 8.2e-114 415.2 326 62.6
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 1.4e-113 414.5 400 62.8
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 3.1e-113 413.3 568 49.5
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 4.1e-113 412.9 546 50.2
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 9.1e-113 411.8 605 46.6
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 3.5e-112 409.8 324 62.7
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 1.0e-111 408.3 319 62.4
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 1.3e-111 407.9 644 44.1
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 1.3e-111 407.9 566 47.2
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 1.3e-111 407.9 635 46.0
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 6.5e-111 405.6 603 46.8
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 1.1e-110 404.8 651 43.8
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 1.5e-110 404.4 621 45.9
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 2.1e-109 400.6 413 57.1
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 6.1e-109 399.1 319 60.2
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 4.0e-108 396.4 625 43.4
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 5.2e-108 396.0 576 48.1
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 2.0e-107 394.0 620 41.9
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 4.4e-107 392.9 645 41.7
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 5.7e-107 392.5 421 56.5
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 1.3e-106 391.3 422 53.3
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 2.8e-106 390.2 321 59.2
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.8e-106 390.2 575 43.3
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 9.1e-105 385.2 381 52.2
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 1.2e-104 384.8 324 58.6
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 1.2e-104 384.8 375 54.1
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 2.0e-104 384.0 597 44.7
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 1.0e-103 381.7 572 45.3
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 1.0e-100 371.7 676 42.3
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 2.2e-98 364.0 271 62.0
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 2.2e-98 364.0 518 41.9
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 1.1e-97 361.7 629 41.2
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 1.1e-97 361.7 409 52.6
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 2.7e-96 357.1 389 52.7
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 2.3e-95 354.0 322 55.3
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 2.5e-94 350.5 465 54.0
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 2.7e-88 330.5 647 40.3
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 2.6e-83 313.9 588 39.6
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 1.9e-81 307.8 608 36.8
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 1.5e-78 298.1 695 33.8
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 2.1e-77 294.3 315 50.2
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 1.1e-73 282.0 316 50.3
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.4e-73 280.8 512 38.9
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 4.6e-72 276.6 378 46.6
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 9.5e-70 268.9 344 42.7
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.3e-66 258.5 558 37.1
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 2.2e-66 257.7 344 42.4
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 1.7e-58 231.5 344 37.5
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 1.0e-55 222.2 147 70.7
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 2.3e-55 221.1 261 53.3
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 3.0e-55 220.7 252 58.3
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 3.9e-55 220.3 467 33.6
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 2.6e-51 207.6 271 43.5
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 5.3e-44 183.3 123 72.4
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 5.3e-36 156.8 396 29.3
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 2.6e-35 154.5 291 37.5
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 8.7e-23 112.8 93 59.1
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 1.1e-20 105.9 186 33.9
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 1.7e-18 98.6 72 63.9
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.2e-16 92.4 81 58.0
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 5.1e-15 87.0 62 59.7
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.5e-14 85.5 350 29.1
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 2.0e-14 85.1 128 39.8
CARHR113280 Cardamine hirsuta HOM05D000125 ORTHO05D009513 1.4e-09 68.9 40 80.0
Oeu017817.1 Olea europaea HOM05D001353 ORTHO05D002359 1.2e-08 65.9 73 38.4
Oeu028353.1 Olea europaea HOM05D005778 ORTHO05D007245 3.0e-07 61.2 45 62.2
Psat7g050000 Pisum sativum HOM05D005778 ORTHO05D007245 7.4e-06 56.6 103 40.8
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 9.7e-06 56.2 53 50.9


User provided reference genes

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