Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G13240 Aethionema arabicum HOM05D001937 ORTHO05D003828 2.8e-151 538.9 329 100.0
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 8.0e-26 122.1 120 55.0
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 2.9e-23 113.6 120 52.5
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 3.7e-23 113.2 120 51.7
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 7.0e-22 109.0 122 49.2
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 1.2e-21 108.2 122 49.2
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 1.2e-21 108.2 122 49.2
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 1.6e-21 107.8 122 49.2
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 1.6e-21 107.8 120 49.2
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 7.8e-21 105.5 120 50.0
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 1.0e-20 105.1 122 47.5
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 5.0e-20 102.8 118 48.3
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 1.5e-19 101.3 117 48.7
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 2.6e-16 90.5 71 62.0
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 6.4e-15 85.9 121 42.1
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 1.9e-14 84.3 117 45.3
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 4.6e-13 79.7 69 55.1
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 4.6e-13 79.7 69 55.1
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 1.0e-12 78.6 66 56.1
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 1.3e-12 78.2 97 43.3
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 3.9e-12 76.6 70 54.3
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 2.5e-11 73.9 104 41.3
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 3.3e-11 73.6 115 41.7
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 4.3e-11 73.2 74 48.6
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 1.6e-10 71.2 91 41.8
Medtr5g026660 Medicago truncatula HOM05D001937 ORTHO05D003828 2.1e-10 70.9 74 45.9
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 2.8e-10 70.5 74 44.6
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 2.8e-10 70.5 74 45.9
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 2.8e-10 70.5 161 32.9
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 3.6e-10 70.1 70 52.9
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 3.6e-10 70.1 66 51.5
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 3.6e-10 70.1 65 53.8
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 4.7e-10 69.7 77 44.2
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 4.7e-10 69.7 78 48.7
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 4.7e-10 69.7 64 53.1
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 6.2e-10 69.3 80 42.5
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 8.1e-10 68.9 65 50.8
QL12p030812 Quercus lobata HOM05D001937 ORTHO05D003828 1.1e-09 68.6 77 51.9
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 1.1e-09 68.6 43 69.8
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea HOM05D001937 ORTHO05D003828 1.4e-09 68.2 82 50.0
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea HOM05D001937 ORTHO05D003828 1.4e-09 68.2 82 50.0
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 1.4e-09 68.2 51 58.8
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 1.4e-09 68.2 71 52.1
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 1.8e-09 67.8 48 66.7
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 2.3e-09 67.4 81 43.2
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 2.3e-09 67.4 81 43.2
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 2.3e-09 67.4 128 34.4
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 2.3e-09 67.4 128 34.4
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 2.3e-09 67.4 128 34.4
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 2.3e-09 67.4 48 62.5
TPR.G17275 Trifolium pratense HOM05D001937 ORTHO05D003828 2.3e-09 67.4 74 44.6
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 4.0e-09 66.6 97 40.2
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 4.0e-09 66.6 106 38.7
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 4.0e-09 66.6 72 50.0
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 5.2e-09 66.2 43 67.4
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 5.2e-09 66.2 90 42.2
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 5.2e-09 66.2 66 48.5
Lalb_Chr05g0215381 Lupinus albus HOM05D001937 ORTHO05D003828 8.9e-09 65.5 85 41.2
Lalb_Chr09g0325221 Lupinus albus HOM05D001937 ORTHO05D003828 8.9e-09 65.5 43 65.1
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 8.9e-09 65.5 37 73.0
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 8.9e-09 65.5 35 80.0
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 1.2e-08 65.1 93 41.9
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 1.2e-08 65.1 87 43.7
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 1.2e-08 65.1 87 43.7
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 1.2e-08 65.1 88 45.5
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 1.2e-08 65.1 88 45.5
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 1.2e-08 65.1 35 77.1
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 1.2e-08 65.1 35 77.1
Rhsim05G0102700 Rhododendron simsii HOM05D001937 ORTHO05D009414 1.2e-08 65.1 40 65.0
Atru.chr3.3790 Acer truncatum HOM05D001937 ORTHO05D003828 1.5e-08 64.7 32 81.2
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 1.5e-08 64.7 74 45.9
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 1.5e-08 64.7 82 43.9
QL03p072736 Quercus lobata HOM05D001937 ORTHO05D003828 2.0e-08 64.3 77 50.6
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 2.0e-08 64.3 51 56.9
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 2.6e-08 63.9 34 79.4
Migut.B00560 Erythranthe guttata HOM05D001937 ORTHO05D003828 2.6e-08 63.9 40 72.5
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 2.6e-08 63.9 35 77.1
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 3.4e-08 63.5 34 76.5
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 4.4e-08 63.2 52 59.6
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 4.4e-08 63.2 80 41.2
Solyc07g006820.4 Solanum lycopersicum HOM05D001937 ORTHO05D003828 4.4e-08 63.2 41 68.3
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 4.4e-08 63.2 41 68.3
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 5.8e-08 62.8 41 68.3
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 5.8e-08 62.8 41 68.3
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 5.8e-08 62.8 34 76.5
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 5.8e-08 62.8 40 70.0
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 7.5e-08 62.4 36 75.0
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 7.5e-08 62.4 36 75.0
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 1.7e-07 61.2 74 43.2
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 1.7e-07 61.2 70 47.1
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 1.7e-07 61.2 32 78.1
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 2.2e-07 60.8 82 42.7
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.2e-07 60.8 74 43.2
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 2.9e-07 60.5 57 50.9
CDE08G1500 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 3.7e-07 60.1 93 38.7
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.7e-07 60.1 77 41.6
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 3.7e-07 60.1 161 29.8
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.1e-06 58.5 35 68.6
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.1e-06 58.5 35 68.6
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 1.1e-06 58.5 31 71.0
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 1.1e-06 58.5 31 71.0
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 1.1e-06 58.5 31 74.2
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 1.1e-06 58.5 51 54.9
RcHm_v2.0_Chr5g0013481 Rosa chinensis HOM05D001937 ORTHO05D003828 1.1e-06 58.5 30 76.7
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 1.4e-06 58.2 140 32.1
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.4e-06 58.2 78 39.7
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.9e-06 57.8 78 39.7
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 1.9e-06 57.8 72 41.7
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 2.4e-06 57.4 138 29.0
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 2.4e-06 57.4 95 38.9
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 5.4e-06 56.2 47 55.3
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 5.4e-06 56.2 51 51.0


User provided reference genes

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