Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 1.2e-297 1025.8 534 100.0
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 5.2e-232 807.7 535 79.3
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 1.1e-231 806.6 535 79.1
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 7.4e-231 803.9 536 79.1
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 2.8e-230 802.0 536 78.4
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 3.7e-230 801.6 535 78.5
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 4.8e-230 801.2 535 78.3
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 8.2e-230 800.4 537 79.0
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 1.6e-228 796.2 535 78.3
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 1.0e-227 793.5 536 77.8
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 2.6e-223 778.9 544 76.8
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 3.7e-222 775.0 537 76.2
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 2.2e-219 765.8 541 75.6
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 7.3e-194 681.0 550 65.8
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 1.6e-193 679.9 561 65.6
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 1.6e-193 679.9 536 67.5
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 4.7e-193 678.3 549 66.3
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.1e-192 677.2 563 65.2
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 5.2e-192 674.9 543 66.7
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 8.9e-192 674.1 536 67.7
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.6e-191 672.5 563 64.8
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 3.4e-191 672.2 559 65.1
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 5.8e-191 671.4 542 65.7
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 1.7e-190 669.8 542 65.3
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 3.7e-190 668.7 528 68.0
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 4.9e-190 668.3 548 64.4
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 6.4e-190 667.9 465 73.1
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.1e-189 667.2 548 64.1
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 1.9e-189 666.4 428 81.3
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.4e-189 666.0 527 66.8
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 3.2e-189 665.6 542 65.3
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 4.1e-189 665.2 504 68.3
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 5.4e-189 664.8 516 68.0
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 1.2e-188 663.7 545 67.0
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 2.1e-188 662.9 547 64.5
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 2.7e-188 662.5 544 67.3
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 7.8e-188 661.0 544 65.6
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.3e-187 660.2 462 72.7
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 3.0e-187 659.1 478 70.5
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 3.9e-187 658.7 534 64.2
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 5.0e-187 658.3 542 64.8
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 4.3e-186 655.2 512 65.4
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 7.3e-186 654.4 542 64.9
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 2.1e-185 652.9 540 63.1
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 3.6e-185 652.1 539 64.6
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 6.2e-185 651.4 464 71.8
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 8.1e-185 651.0 549 62.7
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 1.4e-184 650.2 500 67.6
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 1.4e-184 650.2 518 68.5
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 1.8e-184 649.8 542 64.6
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 5.2e-184 648.3 490 68.8
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 5.2e-184 648.3 562 64.4
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 8.9e-184 647.5 530 64.5
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 2.6e-183 646.0 546 61.5
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 5.8e-183 644.8 545 63.5
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 3.7e-182 642.1 550 64.9
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 4.9e-182 641.7 552 65.4
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 1.1e-181 640.6 464 69.6
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 4.1e-181 638.6 465 70.3
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 7.1e-181 637.9 601 58.2
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 1.2e-180 637.1 446 74.9
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 2.7e-180 636.0 489 69.1
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 3.5e-180 635.6 564 61.2
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 1.0e-179 634.0 504 64.1
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 1.3e-179 633.6 511 67.1
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 2.3e-179 632.9 511 67.3
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 2.3e-179 632.9 536 64.9
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 5.1e-179 631.7 442 71.9
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 5.1e-179 631.7 515 65.8
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 1.1e-178 630.6 526 66.3
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 1.1e-178 630.6 537 64.2
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 4.3e-178 628.6 505 66.7
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 1.8e-176 623.2 545 62.9
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 5.2e-176 621.7 546 60.8
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 1.5e-175 620.2 465 69.0
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 1.5e-175 620.2 538 62.8
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 6.4e-174 614.8 470 66.0
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 8.4e-174 614.4 502 64.1
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 3.2e-173 612.5 478 66.3
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 4.1e-173 612.1 486 67.7
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 4.6e-172 608.6 543 62.2
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.5e-170 603.6 529 62.2
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 1.9e-170 603.2 463 70.8
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 4.4e-167 592.0 504 62.9
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 1.4e-165 587.0 536 60.6
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 2.4e-165 586.3 483 62.7
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 3.2e-165 585.9 546 59.5
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 1.3e-161 573.9 490 61.2
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 9.0e-160 567.8 464 66.2
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 1.3e-158 563.9 465 62.8
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 2.0e-151 540.0 548 54.2
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 1.1e-149 534.3 424 64.6
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 3.4e-143 512.7 416 62.7
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 3.1e-136 489.6 497 54.7
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 1.2e-132 477.6 497 54.1
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 1.5e-98 364.4 325 58.8
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 2.6e-98 363.6 303 65.3
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 1.6e-87 327.8 434 45.4
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 9.8e-82 308.5 268 61.6
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 7.8e-79 298.9 427 41.0
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 8.6e-78 295.4 227 66.1
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 1.2e-76 291.6 167 81.4
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 3.5e-71 273.5 276 54.7
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 3.0e-70 270.4 238 57.6
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 6.4e-65 252.7 197 66.0
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 6.0e-63 246.1 466 37.3
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.7e-62 244.6 362 39.5
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 1.6e-55 221.5 125 78.4
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 3.0e-54 217.2 125 80.0
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 1.9e-53 214.5 201 54.2
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 1.9e-53 214.5 149 73.8
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 4.9e-49 199.9 176 57.4
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 3.9e-46 190.3 166 65.7
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 7.1e-40 169.5 278 36.3
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 4.5e-34 150.2 80 83.8
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 1.6e-28 131.7 223 38.1
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 2.4e-27 127.9 108 64.8
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 3.0e-22 110.9 85 68.2
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 9.7e-21 105.9 74 62.2
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 9.4e-16 89.4 82 56.1
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 4.6e-15 87.0 53 69.8
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 2.0e-13 81.6 101 56.4
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 3.7e-12 77.4 111 41.4
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 4.8e-12 77.0 142 40.1
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 4.8e-12 77.0 55 61.8
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 2.6e-10 71.2 79 57.0
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 1.7e-09 68.6 49 57.1
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 8.5e-09 66.2 74 47.3
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 1.6e-07 62.0 32 90.6
Actinidia33673 Actinidia chinensis HOM05D005980 ORTHO05D007618 2.1e-07 61.6 131 35.9


User provided reference genes

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