Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62044510 Chenopodium quinoa HOM05D000572 ORTHO05D012758 7.8e-36 153.3 79 100.0
AUR62009504 Chenopodium quinoa HOM05D000572 ORTHO05D000840 1.0e-35 152.9 78 100.0
AUR62034781 Chenopodium quinoa HOM05D000572 ORTHO05D000840 1.9e-34 148.7 78 97.4
EL10Ac2g02771 Beta vulgaris HOM05D000572 ORTHO05D000840 8.4e-22 106.7 82 70.7
Ah.11g046700 Amaranthus hybridus HOM05D000572 ORTHO05D000840 2.7e-20 101.7 82 65.9
AUR62031747 Chenopodium quinoa HOM05D000572 ORTHO05D000840 6.6e-19 97.1 82 68.3
Ah.10g030120 Amaranthus hybridus HOM05D000572 ORTHO05D000840 3.1e-16 88.2 84 60.7
EL10Ac5g11326 Beta vulgaris HOM05D000572 ORTHO05D000840 4.5e-15 84.3 85 63.5
Hund02488 Selenicereus undatus HOM05D000572 ORTHO05D000840 8.4e-14 80.1 78 57.7
Actinidia05915 Actinidia chinensis HOM05D000572 ORTHO05D000840 8.7e-11 70.1 57 66.7
Hund10068 Selenicereus undatus HOM05D000572 ORTHO05D000840 8.7e-11 70.1 81 58.0
Cc07_g00730 Coffea canephora HOM05D000572 ORTHO05D000840 3.3e-10 68.2 50 68.0
Ciclev10014341m.g Citrus clementina HOM05D000572 ORTHO05D000840 7.4e-10 67.0 66 60.6
THA.LOC104825616 Tarenaya hassleriana HOM05D000572 ORTHO05D000840 9.6e-10 66.6 54 61.1
AL5G16280 Arabidopsis lyrata HOM05D000572 ORTHO05D000840 2.1e-09 65.5 52 61.5
AL5G16292 Arabidopsis lyrata HOM05D000572 ORTHO05D000840 2.1e-09 65.5 52 61.5
Sabra16G0212700 Salix brachista HOM05D000572 ORTHO05D000840 2.1e-09 65.5 63 54.0
Carub.0005s0540 Capsella rubella HOM05D000572 ORTHO05D000840 2.8e-09 65.1 52 61.5
Cpa.g.sc171.26 Carica papaya HOM05D000572 ORTHO05D000840 4.8e-09 64.3 56 62.5
Thhalv10003679m.g Eutrema salsugineum HOM05D000572 ORTHO05D000840 4.8e-09 64.3 52 59.6
HanXRQChr09g0256191 Helianthus annuus HOM05D000572 ORTHO05D000840 4.8e-09 64.3 56 58.9
Nitab4.5_0000040g0400 Nicotiana tabacum HOM05D000572 ORTHO05D000840 4.8e-09 64.3 56 60.7
Nitab4.5_0002911g0020 Nicotiana tabacum HOM05D000572 ORTHO05D000840 4.8e-09 64.3 56 60.7
Sp7g01050 Schrenkiella parvula HOM05D000572 ORTHO05D000840 4.8e-09 64.3 54 61.1
TWI12G0855 Tripterygium wilfordii HOM05D000572 ORTHO05D000840 4.8e-09 64.3 78 52.6
AL7G48680 Arabidopsis lyrata HOM05D000572 ORTHO05D000840 6.2e-09 63.9 56 58.9
AT5G40890 Arabidopsis thaliana HOM05D000572 ORTHO05D000840 6.2e-09 63.9 55 60.0
BcaC08g44494 Brassica carinata HOM05D000572 ORTHO05D000840 6.2e-09 63.9 54 59.3
A07p20570 Brassica napus HOM05D000572 ORTHO05D000840 6.2e-09 63.9 54 59.3
C06p19460 Brassica napus HOM05D000572 ORTHO05D000840 6.2e-09 63.9 54 59.3
BolC6t37141H Brassica oleracea HOM05D000572 ORTHO05D000840 6.2e-09 63.9 54 59.3
BraA07t29747Z Brassica rapa HOM05D000572 ORTHO05D000840 6.2e-09 63.9 54 59.3
Peaxi162Scf00881g00239 Petunia axillaris HOM05D000572 ORTHO05D000840 6.2e-09 63.9 55 65.5
BcaB06g27760 Brassica carinata HOM05D000572 ORTHO05D000840 8.1e-09 63.5 54 59.3
Thhalv10027650m.g Eutrema salsugineum HOM05D000572 ORTHO05D000840 1.1e-08 63.2 54 59.3
Gohir.A05G339200 Gossypium hirsutum HOM05D000572 ORTHO05D000840 1.1e-08 63.2 55 58.2
Manes.15G159700 Manihot esculenta HOM05D000572 ORTHO05D000840 1.1e-08 63.2 59 61.0
MSTRG.24090 Avicennia marina HOM05D000572 ORTHO05D012758 1.4e-08 62.8 65 55.4
BcaC02g08815 Brassica carinata HOM05D000572 ORTHO05D000840 1.4e-08 62.8 54 59.3
C04p50150 Brassica napus HOM05D000572 ORTHO05D000840 1.4e-08 62.8 54 59.3
BolC4t26615H Brassica oleracea HOM05D000572 ORTHO05D000840 1.4e-08 62.8 54 59.3
BcaB02g07923 Brassica carinata HOM05D000572 ORTHO05D000840 1.8e-08 62.4 55 58.2
CARHR213540 Cardamine hirsuta HOM05D000572 ORTHO05D000840 1.8e-08 62.4 54 59.3
Potri.001G331700 Populus trichocarpa HOM05D000572 ORTHO05D000840 1.8e-08 62.4 57 59.6
PGR142G0672 Punica granatum HOM05D000572 ORTHO05D000840 1.8e-08 62.4 49 67.3
Aa31LG1G13600 Aethionema arabicum HOM05D000572 ORTHO05D000840 2.4e-08 62.0 39 76.9
Lsat_1_v5_gn_4_185120 Lactuca sativa HOM05D000572 ORTHO05D000840 2.4e-08 62.0 48 68.8
arahy.Tifrunner.gnm1.ann1.UM0YXB Arachis hypogaea HOM05D000572 ORTHO05D000840 3.1e-08 61.6 55 60.0
Carub.0007s3461 Capsella rubella HOM05D000572 ORTHO05D000840 3.1e-08 61.6 57 59.6
CAN.G1491.3 Capsicum annuum HOM05D000572 ORTHO05D000840 3.1e-08 61.6 55 61.8
Eucgr.I01654 Eucalyptus grandis HOM05D000572 ORTHO05D000840 3.1e-08 61.6 60 56.7
Glyma.05G077100 Glycine max HOM05D000572 ORTHO05D000840 3.1e-08 61.6 65 53.8
Gohir.D04G077700 Gossypium hirsutum HOM05D000572 ORTHO05D000840 3.1e-08 61.6 55 58.2
Gorai.012G087500 Gossypium raimondii HOM05D000572 ORTHO05D000840 3.1e-08 61.6 55 58.2
Lju41C52T5 Lonicera japonica HOM05D000572 ORTHO05D000840 3.1e-08 61.6 67 53.7
Phvul.001G094700 Phaseolus vulgaris HOM05D000572 ORTHO05D000840 3.1e-08 61.6 55 58.2
Solyc02g068080.3 Solanum lycopersicum HOM05D000572 ORTHO05D000840 3.1e-08 61.6 55 61.8
Sopen02g017190 Solanum pennellii HOM05D000572 ORTHO05D000840 3.1e-08 61.6 55 61.8
VMungo0464G0538 Vigna mungo HOM05D000572 ORTHO05D000840 4.0e-08 61.2 61 54.1
A04p15810 Brassica napus HOM05D000572 ORTHO05D000840 5.3e-08 60.8 41 70.7
PGSC0003DMG400006975 Solanum tuberosum HOM05D000572 ORTHO05D000840 5.3e-08 60.8 55 60.0
SGA_v2.0_scaffold18G08531 Striga asiatica HOM05D000572 ORTHO05D000840 5.3e-08 60.8 59 57.6
COL.COLO4_17187 Corchorus olitorius HOM05D000572 ORTHO05D000840 6.9e-08 60.5 59 64.4
CsaV3_2G034160 Cucumis sativus L. HOM05D000572 ORTHO05D000840 6.9e-08 60.5 59 62.7
Phvul.004G054600 Phaseolus vulgaris HOM05D000572 ORTHO05D000840 6.9e-08 60.5 64 51.6
DCAR_021783 Daucus carota HOM05D000572 ORTHO05D000840 9.0e-08 60.1 53 60.4
ECA232G1355 Erigeron canadensis HOM05D000572 ORTHO05D000840 9.0e-08 60.1 55 58.2
Glyma.19G089800 Glycine max HOM05D000572 ORTHO05D000840 9.0e-08 60.1 55 56.4
TAR629G1205 Trochodendron aralioides HOM05D000572 ORTHO05D000840 9.0e-08 60.1 52 67.3
Aa31LG2G5460 Aethionema arabicum HOM05D000572 ORTHO05D000840 1.2e-07 59.7 42 69.0
HanXRQChr15g0486961 Helianthus annuus HOM05D000572 ORTHO05D000840 1.2e-07 59.7 41 73.2
GSVIVG01033108001 Vitis vinifera HOM05D000572 ORTHO05D000840 1.2e-07 59.7 67 49.3
BcaC06g31015 Brassica carinata HOM05D000572 ORTHO05D000840 1.5e-07 59.3 52 59.6
CiPaw.03G054400 Carya illinoinensis HOM05D000572 ORTHO05D000840 1.5e-07 59.3 47 63.8
CDE05G3220 Ceratophyllum demersum HOM05D000572 ORTHO05D043473 1.5e-07 59.3 41 63.4
ClCG11G007060 Citrullus lanatus HOM05D000572 ORTHO05D000840 1.5e-07 59.3 66 53.0
Duzib187G1356 Durio zibethinus HOM05D000572 ORTHO05D000840 1.5e-07 59.3 55 61.8
Lalb_Chr02g0157731 Lupinus albus HOM05D000572 ORTHO05D000840 1.5e-07 59.3 63 54.0
Medtr6g023770 Medicago truncatula HOM05D000572 ORTHO05D000840 1.5e-07 59.3 60 53.3
AT3G27170 Arabidopsis thaliana HOM05D000572 ORTHO05D000840 2.0e-07 58.9 53 58.5
Haze_14861 Corylus avellana HOM05D000572 ORTHO05D000840 2.0e-07 58.9 50 64.0
Oeu011962.2 Olea europaea HOM05D000572 ORTHO05D000840 2.0e-07 58.9 48 64.6
DCAR_002950 Daucus carota HOM05D000572 ORTHO05D000840 2.6e-07 58.5 64 51.6
MD17G1013000 Malus domestica HOM05D000572 ORTHO05D000840 2.6e-07 58.5 41 73.2
SalBow4G1654 Salvia bowleyana HOM05D000572 ORTHO05D000840 2.6e-07 58.5 53 54.7
VMungo1383G2141 Vigna mungo HOM05D000572 ORTHO05D000840 2.6e-07 58.5 48 58.3
MELO3C008197.2 Cucumis melo HOM05D000572 ORTHO05D000840 3.4e-07 58.2 59 61.0
FAN14G5678 Fragaria x ananassa HOM05D000572 ORTHO05D000840 4.5e-07 57.8 42 73.8
Os12g0438600 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D012758 5.8e-07 57.4 61 52.5
Sp2g16280 Schrenkiella parvula HOM05D000572 ORTHO05D000840 5.8e-07 57.4 55 54.5
CARHR148370 Cardamine hirsuta HOM05D000572 ORTHO05D000840 7.6e-07 57.0 39 69.2
Psat3g164640 Pisum sativum HOM05D000572 ORTHO05D000840 7.6e-07 57.0 36 75.0
Atru.chr6.2547 Acer truncatum HOM05D000572 ORTHO05D000840 9.9e-07 56.6 54 63.0
Atru.chr6.2555 Acer truncatum HOM05D000572 ORTHO05D000840 9.9e-07 56.6 54 63.0
Ca_11802_v3 Cicer arietinum L. HOM05D000572 ORTHO05D000840 9.9e-07 56.6 58 51.7
Migut.F00073 Erythranthe guttata HOM05D000572 ORTHO05D000840 9.9e-07 56.6 39 69.2
Migut.K01459 Erythranthe guttata HOM05D000572 ORTHO05D000840 9.9e-07 56.6 64 46.9
BcaB07g30184 Brassica carinata HOM05D000572 ORTHO05D000840 1.3e-06 56.2 56 53.6
Cfa007239 Carpinus fangiana HOM05D000572 ORTHO05D000840 1.3e-06 56.2 48 60.4
ECA238G0600 Erigeron canadensis HOM05D000572 ORTHO05D000840 1.3e-06 56.2 52 53.8
BcaC06g33852 Brassica carinata HOM05D000572 ORTHO05D000840 1.7e-06 55.8 52 55.8
A06p41450 Brassica napus HOM05D000572 ORTHO05D000840 1.7e-06 55.8 52 55.8
C07p36190 Brassica napus HOM05D000572 ORTHO05D000840 1.7e-06 55.8 52 55.8
BolC7t44135H Brassica oleracea HOM05D000572 ORTHO05D000840 1.7e-06 55.8 52 55.8
BraA06t27071Z Brassica rapa HOM05D000572 ORTHO05D000840 1.7e-06 55.8 52 55.8
Lj1g0013949 Lotus japonicus HOM05D000572 ORTHO05D000840 2.2e-06 55.5 62 58.1
SGA_v2.0_scaffold47G17586 Striga asiatica HOM05D000572 ORTHO05D000840 2.2e-06 55.5 64 53.1
Zm00001eb389440 Zea mays HOM05D000572 ORTHO05D000840 2.2e-06 55.5 33 78.8
Aqoxy5G03413 Aquilegia oxysepala HOM05D000572 ORTHO05D000840 2.9e-06 55.1 51 60.8
FAN02G3459 Fragaria x ananassa HOM05D000572 ORTHO05D000840 2.9e-06 55.1 59 59.3
FAN05G1524 Fragaria x ananassa HOM05D000572 ORTHO05D000840 2.9e-06 55.1 42 71.4
Glyma.16G057600 Glycine max HOM05D000572 ORTHO05D000840 2.9e-06 55.1 56 55.4
Peaxi162Scf00692g00522 Petunia axillaris HOM05D000572 ORTHO05D000840 2.9e-06 55.1 48 60.4
FAN05G4279 Fragaria x ananassa HOM05D000572 ORTHO05D000840 3.8e-06 54.7 46 63.0
Gohir.A07G227500 Gossypium hirsutum HOM05D000572 ORTHO05D000840 4.9e-06 54.3 55 56.4
BcaC03g17430 Brassica carinata HOM05D000572 ORTHO05D000840 6.4e-06 53.9 41 61.0
A02p35150 Brassica napus HOM05D000572 ORTHO05D000840 6.4e-06 53.9 41 61.0
C02p53790 Brassica napus HOM05D000572 ORTHO05D000840 6.4e-06 53.9 41 61.0
BolC2t11447H Brassica oleracea HOM05D000572 ORTHO05D000840 6.4e-06 53.9 41 61.0
BraA02t08522Z Brassica rapa HOM05D000572 ORTHO05D000840 6.4e-06 53.9 41 61.0


User provided reference genes

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