Gene: AT3G27170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G27170
  • Transcript Identifier AT3G27170.1
  • Gene Type Coding gene
  • Location Chr3 : 10024147-10026921 : positive

Gene Family Information

  • ID HOM05D000572
  • #Genes/#Species 968/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G27170.1
  • symbol CLC-B
  • Alias ATCLC-B
  • uniprot P92942

Descriptions

  • Description chloride channel B
  • Computational description chloride channel B (CLC-B); FUNCTIONS IN: nitrate:hydrogen symporter activity, anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel A (TAIR:AT5G40890.1); Has 6974 Blast hits to 6653 proteins in 1746 species: Archae - 129; Bacteria - 4490; Metazoa - 970; Fungi - 341; Plants - 365; Viruses - 0; Other Eukaryotes - 679 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006821
IEA
GOA Databasechloride transport
GO:0006821
IEA
InterProchloride transport
GO:0034765
IEA
GOA Databaseregulation of ion transmembrane transport
GO:0006811
IEA
GOA Databaseion transport
GO:0034220
IEA
GOA Databaseion transmembrane transport
GO:0015706
IEA
GOA Databasenitrate transport
GO:1902600
IEA
GOA Databaseproton transmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005247
IEA
Gene Ontologyvoltage-gated chloride channel activity
GO:0005247
IEA
InterProvoltage-gated chloride channel activity
GO:0005244
IEA
GOA Databasevoltage-gated ion channel activity
GO:0005254
IEA
GOA Databasechloride channel activity
GO:0009671
IDA
IBA
Gene Ontologynitrate:proton symporter activity1 2
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0005253
ISS
Gene Ontologyanion channel activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0034707
IEA
GOA Databasechloride channel complex
GO:0009705
IDA
IBA
Gene Ontologyplant-type vacuole membrane1 2
GO:0043231
IBA
Gene Ontologyintracellular membrane-bounded organelle2
GO:0005622
TAS
Gene Ontologyintracellular anatomical structure4
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001807 Chloride channel, voltage gated
IPR014743 Chloride channel, core
IPR000644 CBS domain
IPR002251 Chloride channel ClC-plant
Mapman id Description
24.2.15 Solute transport.carrier-mediated transport.anion channel / anion:proton antiporter (CLC)