Gene: COL.COLO4_17187

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_17187
  • Transcript Identifier COL.rna15951
  • Gene Type Coding gene
  • Location AWUE01016310.1 : 65717-68908 : negative

Gene Family Information

  • ID HOM05D000572
  • #Genes/#Species 968/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna15951
  • GenBank OMO92972.1
  • id gene17159
  • gene_name COLO4_17187
  • uniprot A0A1R3JDR2

Descriptions

  • Description Cystathionine beta-synthase, core
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010167
ISO
PLAZA Integrative Orthologyresponse to nitrate AT5G40890
GO:0015706
ISO
PLAZA Integrative Orthologynitrate transport AT5G40890
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0034220
IEA
GOA Databaseion transmembrane transport
GO:0006821
IEA
GOA Databasechloride transport
GO:0006821
IEA
InterProchloride transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009671
ISO
PLAZA Integrative Orthologynitrate:proton symporter activity AT3G27170
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G40890
GO:0015112
ISO
PLAZA Integrative Orthologynitrate transmembrane transporter activity AT5G40890
GO:0005247
IEA
GOA Databasevoltage-gated chloride channel activity
GO:0005247
IEA
InterProvoltage-gated chloride channel activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT5G40890
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT3G27170
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014743 Chloride channel, core
IPR000644 CBS domain
IPR001807 Chloride channel, voltage gated
IPR002251 Chloride channel ClC-plant
Mapman id Description
24.2.15 Solute transport.carrier-mediated transport.anion channel / anion:proton antiporter (CLC)