Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 0.0e+00 1122.1 564 100.0
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 1.5e-245 852.8 566 77.2
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 3.6e-244 848.2 568 76.2
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 2.3e-222 775.8 566 71.9
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 2.5e-216 755.7 570 68.2
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 1.0e-198 697.2 567 63.0
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 1.4e-198 696.8 568 63.7
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 4.4e-197 691.8 556 63.8
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 1.4e-195 686.8 567 62.6
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 6.9e-195 684.5 572 63.1
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 4.5e-194 681.8 573 62.5
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 4.5e-194 681.8 574 63.6
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 4.5e-194 681.8 569 62.6
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 2.9e-193 679.1 578 61.4
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 8.5e-193 677.6 567 62.8
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 7.2e-192 674.5 567 62.1
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 1.2e-191 673.7 575 61.2
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 1.6e-191 673.3 570 61.6
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 2.7e-191 672.5 587 60.5
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 2.7e-191 672.5 569 62.4
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 4.7e-191 671.8 574 62.0
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 1.0e-190 670.6 567 62.4
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 1.4e-190 670.2 566 61.8
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 1.4e-190 670.2 567 61.9
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 2.3e-190 669.5 564 61.9
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 3.9e-190 668.7 571 62.2
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 3.9e-190 668.7 572 62.1
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 3.9e-190 668.7 568 63.6
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 5.2e-190 668.3 567 62.3
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 4.4e-189 665.2 563 62.2
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 4.4e-189 665.2 568 61.6
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 1.3e-188 663.7 568 60.9
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 1.7e-188 663.3 574 60.6
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 1.7e-188 663.3 569 61.0
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 1.7e-188 663.3 566 61.1
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 2.2e-188 662.9 567 61.0
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 6.3e-188 661.4 571 61.1
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 6.3e-188 661.4 566 59.2
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 1.1e-187 660.6 571 60.8
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 1.8e-187 659.8 567 59.6
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 2.4e-187 659.4 572 59.6
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 1.6e-186 656.8 569 61.3
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 1.6e-186 656.8 568 62.0
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 4.5e-186 655.2 566 60.4
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 4.5e-186 655.2 566 59.7
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 5.9e-186 654.8 568 61.3
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 7.7e-186 654.4 567 61.4
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 7.7e-186 654.4 568 60.6
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 1.0e-185 654.1 532 64.1
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 1.0e-185 654.1 570 60.7
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 1.3e-185 653.7 566 60.6
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 2.2e-185 652.9 585 59.0
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 2.9e-185 652.5 566 60.6
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 2.9e-185 652.5 567 60.5
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 5.0e-185 651.7 596 58.1
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 8.5e-185 651.0 576 60.1
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 1.5e-184 650.2 573 60.4
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 1.5e-184 650.2 573 60.4
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 3.2e-184 649.0 570 59.5
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 5.5e-184 648.3 570 59.5
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 2.1e-183 646.4 580 59.5
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 4.7e-183 645.2 569 60.3
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 4.7e-183 645.2 583 58.1
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 6.1e-183 644.8 593 58.9
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 1.0e-182 644.0 570 60.2
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 3.0e-182 642.5 574 59.9
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 4.8e-180 635.2 569 60.1
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 1.4e-179 633.6 566 58.3
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 1.7e-177 626.7 607 55.8
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 2.9e-177 625.9 562 59.1
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 8.5e-177 624.4 568 59.5
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 1.1e-176 624.0 562 59.6
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 1.5e-176 623.6 548 57.5
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 3.2e-176 622.5 663 52.6
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 7.2e-176 621.3 566 58.1
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 9.4e-176 620.9 604 56.1
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 1.6e-175 620.2 558 57.5
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 1.2e-173 614.0 569 58.5
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 4.4e-173 612.1 571 55.3
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 5.4e-171 605.1 554 58.1
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 5.5e-168 595.1 575 55.5
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 2.8e-167 592.8 544 58.5
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 4.7e-167 592.0 566 54.9
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 1.3e-164 583.9 506 60.9
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 3.1e-163 579.3 514 59.5
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 5.9e-162 575.1 481 62.8
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 1.5e-160 570.5 567 52.4
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 6.1e-159 565.1 578 55.5
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 1.4e-158 563.9 506 58.9
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 6.6e-153 545.0 606 51.7
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 8.6e-153 544.7 401 67.6
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 9.5e-152 541.2 489 58.5
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 1.4e-150 537.3 537 53.3
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 1.8e-150 537.0 567 53.8
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 9.2e-147 524.6 568 52.5
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 3.5e-146 522.7 336 73.2
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 8.9e-142 508.1 565 50.6
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.0e-137 494.6 582 48.6
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 1.9e-136 490.3 455 57.8
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 3.6e-135 486.1 551 46.6
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 2.0e-133 480.3 566 47.0
AUR62026578 Chenopodium quinoa HOM05D005206 ORTHO05D006219 8.4e-132 474.9 297 85.9
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 8.4e-124 448.4 269 77.3
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 1.1e-123 448.0 275 77.1
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.1e-123 448.0 217 97.7
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 8.7e-121 438.3 481 49.5
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 4.9e-116 422.5 343 60.9
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 4.2e-107 392.9 401 54.6
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 3.5e-106 389.8 320 56.9
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 1.8e-102 377.5 553 42.9
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 2.7e-98 363.6 556 41.5
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 2.1e-90 337.4 379 51.2
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 4.6e-90 336.3 406 51.7
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.5e-83 313.9 268 58.6
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 2.3e-81 307.4 571 32.6
PGSC0003DMG400015600 Solanum tuberosum HOM05D005206 ORTHO05D006219 3.9e-81 306.6 186 76.9
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 3.3e-80 303.5 425 45.6
Cc11_g14240 Coffea canephora HOM05D005206 ORTHO05D006219 6.3e-79 299.3 186 74.7
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 5.9e-77 292.7 517 37.3
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 3.0e-73 280.4 507 34.3
HPP92_017072 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.5e-72 278.1 208 63.9
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.5e-69 266.5 326 48.8
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 2.7e-66 257.3 312 42.0
Cpa.g.sc5.345 Carica papaya HOM05D005206 ORTHO05D006219 4.2e-59 233.4 141 73.8
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 4.7e-58 229.9 314 39.5
MD16G1086600 Malus domestica HOM05D005206 ORTHO05D006219 6.8e-57 226.1 296 47.0
VMungo0464G1917 Vigna mungo HOM05D005206 ORTHO05D006219 1.1e-54 218.8 297 46.8
Cpa.g.sc5.344 Carica papaya HOM05D005206 ORTHO05D006219 1.8e-54 218.0 296 47.3
Cpa.g.sc5.348 Carica papaya HOM05D005206 ORTHO05D006219 2.0e-48 198.0 112 80.4
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.9e-38 164.9 350 31.1
HPP92_017071 Vanilla planifolia HOM05D005206 ORTHO05D006219 3.5e-37 160.6 253 44.7
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 3.3e-35 154.1 451 25.5
VMungo0464G2026 Vigna mungo HOM05D005206 ORTHO05D006219 2.3e-33 147.9 93 73.1
SHI08109 Sapria himalayana HOM05D005206 ORTHO05D006219 3.7e-31 140.6 122 56.6
MCO16G526 Micromonas commoda HOM05D005206 ORTHO05D006219 7.1e-30 136.3 385 26.8
FvH4_6g23350 Fragaria vesca HOM05D005206 ORTHO05D006219 1.1e-27 129.0 81 72.8
FvH4_5g07370 Fragaria vesca HOM05D003058 ORTHO05D003464 5.6e-19 100.1 97 52.6
RcHm_v2.0_Chr3g0484611 Rosa chinensis HOM05D005206 ORTHO05D006219 4.7e-18 97.1 58 77.6
Cre17.g716101 Chlamydomonas reinhardtii HOM05D005206 ORTHO05D006219 1.5e-16 92.0 204 32.4
HPP92_017068 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.0e-12 79.3 60 58.3
Ca_04200_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 7.3e-11 73.2 55 58.2
PRCOL_00003580 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 2.1e-10 71.6 168 28.0
RcHm_v2.0_Chr4g0401081 Rosa chinensis HOM05D005206 ORTHO05D006219 5.4e-06 57.0 40 65.0


User provided reference genes

Program Settings