Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038716 Chenopodium quinoa HOM05D004522 ORTHO05D005887 8.1e-67 256.9 128 100.0
AUR62043895 Chenopodium quinoa HOM05D004522 ORTHO05D005887 6.9e-66 253.8 128 98.4
AUR62020658 Chenopodium quinoa HOM05D004522 ORTHO05D005887 4.5e-65 251.1 128 96.9
AUR62028071 Chenopodium quinoa HOM05D004522 ORTHO05D005887 6.9e-58 227.3 122 91.8
AUR62044451 Chenopodium quinoa HOM05D004522 ORTHO05D005887 1.2e-49 199.9 128 82.0
EL10Ac2g03676 Beta vulgaris HOM05D004522 ORTHO05D005887 2.2e-48 195.7 126 79.4
GSVIVG01035576001 Vitis vinifera HOM05D004522 ORTHO05D005887 4.8e-43 177.9 119 70.6
CSS0030659 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 6.3e-43 177.6 120 70.8
Dinv38803 Davidia involucrata HOM05D004522 ORTHO05D005887 1.1e-42 176.8 120 70.8
Dinv37488 Davidia involucrata HOM05D004522 ORTHO05D005887 1.4e-42 176.4 120 70.8
Phvul.002G181900 Phaseolus vulgaris HOM05D004522 ORTHO05D005887 1.4e-42 176.4 125 64.0
VMungo0251G2701 Vigna mungo HOM05D004522 ORTHO05D005887 4.1e-42 174.9 125 62.4
Cfa013296 Carpinus fangiana HOM05D004522 ORTHO05D005887 9.0e-42 173.7 120 70.0
TWI63G0055 Tripterygium wilfordii HOM05D004522 ORTHO05D005887 9.0e-42 173.7 120 66.7
ClCG05G026380 Citrullus lanatus HOM05D004522 ORTHO05D005887 1.2e-41 173.3 119 69.7
Ah.14g088390 Amaranthus hybridus HOM05D004522 ORTHO05D005887 1.5e-41 172.9 125 69.6
Haze_21779 Corylus avellana HOM05D004522 ORTHO05D005887 1.5e-41 172.9 120 69.2
Eucgr.C02139 Eucalyptus grandis HOM05D004522 ORTHO05D005887 2.0e-41 172.6 120 65.8
Lalb_Chr22g0361201 Lupinus albus HOM05D004522 ORTHO05D005887 2.0e-41 172.6 128 62.5
CAN.G809.41 Capsicum annuum HOM05D004522 ORTHO05D005887 2.6e-41 172.2 120 68.3
CiPaw.07G210600 Carya illinoinensis HOM05D004522 ORTHO05D005887 4.5e-41 171.4 120 67.5
Hma1.2p1_0495F.1_g165690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 1.0e-40 170.2 120 69.2
Peaxi162Scf00036g01311 Petunia axillaris HOM05D004522 ORTHO05D005887 1.0e-40 170.2 120 66.7
Ciclev10007345m.g Citrus clementina HOM05D004522 ORTHO05D005887 1.3e-40 169.9 120 65.8
arahy.Tifrunner.gnm1.ann1.696W46 Arachis hypogaea HOM05D004522 ORTHO05D005887 2.2e-40 169.1 126 63.5
Glyma.17G196400 Glycine max HOM05D004522 ORTHO05D005887 2.2e-40 169.1 125 60.8
Solyc02g081910.2 Solanum lycopersicum HOM05D004522 ORTHO05D005887 5.0e-40 167.9 120 64.2
Sopen02g026540 Solanum pennellii HOM05D004522 ORTHO05D005887 5.0e-40 167.9 120 64.2
Hma1.2p1_0534F.1_g173690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 8.5e-40 167.2 120 67.5
Hma1.2p1_1265F.1_g271353 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 8.5e-40 167.2 120 67.5
arahy.Tifrunner.gnm1.ann1.IIX4FM Arachis hypogaea HOM05D004522 ORTHO05D005887 1.1e-39 166.8 126 62.7
Sed0013871 Sechium edule HOM05D004522 ORTHO05D005887 1.4e-39 166.4 120 66.7
DCAR_006332 Daucus carota HOM05D004522 ORTHO05D005887 2.5e-39 165.6 125 60.0
Psat6g033360 Pisum sativum HOM05D004522 ORTHO05D005887 2.5e-39 165.6 125 61.6
Carub.0007s0933 Capsella rubella HOM05D004522 ORTHO05D005887 4.2e-39 164.9 125 62.4
Nitab4.5_0011308g0040 Nicotiana tabacum HOM05D004522 ORTHO05D005887 4.2e-39 164.9 120 64.2
Nn4g23566 Nelumbo nucifera HOM05D004522 ORTHO05D005887 5.5e-39 164.5 120 64.2
Thecc.09G000400 Theobroma cacao HOM05D004522 ORTHO05D005887 7.2e-39 164.1 120 64.2
Cpa.g.sc246.4 Carica papaya HOM05D004522 ORTHO05D005887 9.4e-39 163.7 121 62.0
SalBow1G6309 Salvia bowleyana HOM05D004522 ORTHO05D005887 1.2e-38 163.3 124 62.1
Prupe.1G457500 Prunus persica HOM05D004522 ORTHO05D005887 2.7e-38 162.2 131 61.1
Glyma.14G137100 Glycine max HOM05D004522 ORTHO05D005887 3.6e-38 161.8 122 61.5
Nitab4.5_0000844g0320 Nicotiana tabacum HOM05D004522 ORTHO05D005887 3.6e-38 161.8 120 63.3
Gorai.010G125500 Gossypium raimondii HOM05D004522 ORTHO05D005887 4.6e-38 161.4 120 62.5
SGA_v2.0_scaffold62G21366 Striga asiatica HOM05D004522 ORTHO05D005887 4.6e-38 161.4 124 63.7
vmacro18846 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 4.6e-38 161.4 120 63.3
Gohir.A06G108300 Gossypium hirsutum HOM05D004522 ORTHO05D005887 6.1e-38 161.0 120 62.5
Manes.03G000450 Manihot esculenta HOM05D004522 ORTHO05D005887 6.1e-38 161.0 120 63.3
Rhsim08G0228200 Rhododendron simsii HOM05D004522 ORTHO05D005887 6.1e-38 161.0 120 62.5
Oeu005158.2 Olea europaea HOM05D004522 ORTHO05D005887 7.9e-38 160.6 120 63.3
Potri.006G279700 Populus trichocarpa HOM05D004522 ORTHO05D005887 7.9e-38 160.6 120 63.3
PSO063G2748 Papaver somniferum HOM05D004522 ORTHO05D005887 1.0e-37 160.2 122 62.3
QL12p025652 Quercus lobata HOM05D004522 ORTHO05D005887 1.0e-37 160.2 120 65.0
Actinidia21721 Actinidia chinensis HOM05D004522 ORTHO05D005887 1.4e-37 159.8 120 62.5
CANSAT25G3238 Cannabis sativa HOM05D004522 ORTHO05D005887 1.4e-37 159.8 119 59.7
Atru.chr7.2700 Acer truncatum HOM05D004522 ORTHO05D005887 1.8e-37 159.5 121 63.6
PSO782G1701 Papaver somniferum HOM05D004522 ORTHO05D005887 3.0e-37 158.7 122 62.3
TPR.G12110 Trifolium pratense HOM05D004522 ORTHO05D005887 3.0e-37 158.7 125 59.2
CsaV3_3G047220 Cucumis sativus L. HOM05D004522 ORTHO05D005887 3.9e-37 158.3 114 65.8
Migut.C00355 Erythranthe guttata HOM05D004522 ORTHO05D005887 8.8e-37 157.1 120 62.5
Hund03258 Selenicereus undatus HOM05D004522 ORTHO05D005887 8.8e-37 157.1 128 60.2
ECA234G1339 Erigeron canadensis HOM05D004522 ORTHO05D005887 1.5e-36 156.4 122 60.7
RcHm_v2.0_Chr6g0305241 Rosa chinensis HOM05D004522 ORTHO05D005887 1.5e-36 156.4 126 56.3
BcaNung01535 Brassica carinata HOM05D004522 ORTHO05D005887 2.0e-36 156.0 126 57.9
C01p07770 Brassica napus HOM05D004522 ORTHO05D005887 2.0e-36 156.0 129 58.1
C07p58490 Brassica napus HOM05D004522 ORTHO05D005887 2.0e-36 156.0 126 57.9
TAR629G0385 Trochodendron aralioides HOM05D004522 ORTHO05D005887 2.5e-36 155.6 121 61.2
A03p60590 Brassica napus HOM05D004522 ORTHO05D005887 3.3e-36 155.2 126 57.1
FvH4_2g36580 Fragaria vesca HOM05D004522 ORTHO05D005887 3.3e-36 155.2 121 57.9
Sabra06G0216700 Salix brachista HOM05D004522 ORTHO05D005887 3.3e-36 155.2 126 61.1
Aqoxy3G03771 Aquilegia oxysepala HOM05D004522 ORTHO05D005887 4.3e-36 154.8 120 60.8
AT4G31210 Arabidopsis thaliana HOM05D004522 ORTHO05D005887 4.3e-36 154.8 126 57.9
A01p07030 Brassica napus HOM05D004522 ORTHO05D005887 4.3e-36 154.8 128 57.8
BolC7t46304H Brassica oleracea HOM05D004522 ORTHO05D005887 4.3e-36 154.8 126 57.9
BraA01t00655Z Brassica rapa HOM05D004522 ORTHO05D005887 4.3e-36 154.8 128 57.8
Sp7g29090 Schrenkiella parvula HOM05D004522 ORTHO05D005887 4.3e-36 154.8 127 57.5
unitig_60.g25825 Utricularia gibba HOM05D004522 ORTHO05D005887 4.3e-36 154.8 113 60.2
THA.LOC104819919 Tarenaya hassleriana HOM05D004522 ORTHO05D005887 5.7e-36 154.5 122 59.8
Aa31LG2G19110 Aethionema arabicum HOM05D004522 ORTHO05D005887 7.4e-36 154.1 123 58.5
MD08G1125900 Malus domestica HOM05D004522 ORTHO05D005887 7.4e-36 154.1 123 60.2
Thhalv10024242m.g Eutrema salsugineum HOM05D004522 ORTHO05D005887 9.7e-36 153.7 127 56.7
MD15G1105700 Malus domestica HOM05D004522 ORTHO05D005887 9.7e-36 153.7 123 61.0
FAN20G0828 Fragaria x ananassa HOM05D004522 ORTHO05D005887 1.7e-35 152.9 121 56.2
FAN27G1482 Fragaria x ananassa HOM05D004522 ORTHO05D005887 2.2e-35 152.5 121 55.4
AL7G20870 Arabidopsis lyrata HOM05D004522 ORTHO05D005887 2.8e-35 152.1 127 53.5
BcaC09g51903 Brassica carinata HOM05D004522 ORTHO05D005887 2.8e-35 152.1 128 57.0
BolC1t00764H Brassica oleracea HOM05D004522 ORTHO05D005887 2.8e-35 152.1 128 57.0
Aa31LG2G19120 Aethionema arabicum HOM05D004522 ORTHO05D005887 3.7e-35 151.8 123 59.3
HanXRQChr16g0521121 Helianthus annuus HOM05D004522 ORTHO05D005887 3.7e-35 151.8 125 57.6
ATR0691G178 Amborella trichopoda HOM05D004522 ORTHO05D005887 4.8e-35 151.4 127 54.3
CARHR239110 Cardamine hirsuta HOM05D004522 ORTHO05D005887 6.3e-35 151.0 126 55.6
Sed0008341 Sechium edule HOM05D004522 ORTHO05D005887 9.1e-34 147.1 125 56.8
Cc09_g04950 Coffea canephora HOM05D004522 ORTHO05D005887 1.5e-33 146.4 121 57.0
Lj5g0011494 Lotus japonicus HOM05D004522 ORTHO05D005887 2.0e-33 146.0 125 54.4
MELO3C003609.2 Cucumis melo HOM05D004522 ORTHO05D005887 5.9e-33 144.4 118 55.9
TPR.G39482 Trifolium pratense HOM05D004522 ORTHO05D005887 1.0e-32 143.7 113 59.3
CANSAT54G0998 Cannabis sativa HOM05D004522 ORTHO05D005887 2.9e-32 142.1 120 55.0
MBI16_g42310_MAGBIO Magnolia biondii HOM05D004522 ORTHO05D005887 5.0e-32 141.4 120 54.2
Zm00001eb380580 Zea mays HOM05D004522 ORTHO05D005887 5.0e-32 141.4 120 56.7
COL.COLO4_18648 Corchorus olitorius HOM05D004522 ORTHO05D005887 1.1e-31 140.2 113 60.2
Medtr0245s0010 Medicago truncatula HOM05D004522 ORTHO05D005887 1.1e-31 140.2 116 58.6
Medtr1g009315 Medicago truncatula HOM05D004522 ORTHO05D005887 1.1e-31 140.2 116 58.6
Actinidia32105 Actinidia chinensis HOM05D004522 ORTHO05D005887 1.4e-31 139.8 120 56.7
Psat6g033400 Pisum sativum HOM05D004522 ORTHO05D005887 5.5e-31 137.9 119 52.9
Medtr0229s0020 Medicago truncatula HOM05D004522 ORTHO05D005887 1.2e-30 136.7 117 57.3
Ca_01520_v3 Cicer arietinum L. HOM05D004522 ORTHO05D005887 1.6e-30 136.3 102 60.8
CDE02G2996 Ceratophyllum demersum HOM05D004522 ORTHO05D005887 6.1e-30 134.4 122 52.5
Lj8C583T4 Lonicera japonica HOM05D004522 ORTHO05D005887 2.3e-29 132.5 95 65.3
PSO478G3803 Papaver somniferum HOM05D004522 ORTHO05D005887 6.7e-29 131.0 123 52.0
Medtr1g009570 Medicago truncatula HOM05D004522 ORTHO05D005887 1.5e-28 129.8 125 52.8
BraA03t15100Z Brassica rapa HOM05D004522 ORTHO05D005887 2.6e-28 129.0 85 67.1
Zm00001eb280820 Zea mays HOM05D004522 ORTHO05D005887 7.4e-28 127.5 125 51.2
RhsimUnG0118700 Rhododendron simsii HOM05D004522 ORTHO05D005887 1.7e-27 126.3 113 53.1
Migut.E00600 Erythranthe guttata HOM05D004522 ORTHO05D005887 6.3e-27 124.4 113 54.9
vmacro20064 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 1.2e-25 120.2 85 63.5
Pp3c23_11430 Physcomitrium patens HOM05D004522 ORTHO05D005887 3.2e-23 112.1 120 46.7
Lsat_1_v5_gn_4_39420 Lactuca sativa HOM05D004522 ORTHO05D005887 5.2e-21 104.8 94 53.2
Pp3c24_9990 Physcomitrium patens HOM05D004522 ORTHO05D005887 1.1e-20 103.6 123 43.1
SEGI_38297 Sequoiadendron giganteum HOM05D004522 ORTHO05D005887 2.0e-20 102.8 85 60.0
AagrBONN_evm.TU.Sc2ySwM_228.692 Anthoceros agrestis HOM05D004522 ORTHO05D005887 6.5e-16 87.8 125 42.4
Sc10g0004210 Simmondsia chinensis HOM05D004522 ORTHO05D005887 5.5e-15 84.7 53 75.5
Mapoly0025s0095 Marchantia polymorpha HOM05D004522 ORTHO05D005887 1.6e-14 83.2 113 38.1
HPP92_015554 Vanilla planifolia HOM05D004522 ORTHO05D005887 1.5e-12 76.6 156 34.0
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.0e-12 76.3 97 51.5
SMO304G0055 Selaginella moellendorffii HOM05D004522 ORTHO05D005887 2.0e-12 76.3 112 41.1
CSS0024449 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 4.2e-07 58.5 31 83.9
SMO014G0004 Selaginella moellendorffii HOM05D004522 ORTHO05D005887 4.2e-07 58.5 76 44.7
CSS0018701 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 5.5e-07 58.2 29 89.7
CSS0037923 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 1.6e-06 56.6 29 86.2
Gohir.D06G110400 Gossypium hirsutum HOM05D004522 ORTHO05D005887 3.6e-06 55.5 30 83.3


User provided reference genes

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