Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038699 Chenopodium quinoa HOM05D001392 ORTHO05D014312 2.4e-93 345.5 177 100.0
AUR62018211 Chenopodium quinoa HOM05D001392 ORTHO05D006407 3.1e-85 318.5 174 93.1
Ah.12g060150 Amaranthus hybridus HOM05D001392 ORTHO05D006407 3.9e-67 258.5 149 86.6
EL10Ac2g03165 Beta vulgaris HOM05D001392 ORTHO05D006407 2.3e-64 249.2 149 84.6
Hund13115 Selenicereus undatus HOM05D001392 ORTHO05D006407 4.4e-63 245.0 149 81.2
Atru.chr1.1875 Acer truncatum HOM05D001392 ORTHO05D006407 2.6e-55 219.2 148 76.4
COL.COLO4_09038 Corchorus olitorius HOM05D001392 ORTHO05D006407 7.6e-55 217.6 149 73.2
CSS0004873 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D006407 1.3e-54 216.9 149 72.5
CSS0005968 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D006407 1.3e-54 216.9 149 72.5
Dinv19030 Davidia involucrata HOM05D001392 ORTHO05D006407 2.9e-54 215.7 149 74.5
Thecc.04G116700 Theobroma cacao HOM05D001392 ORTHO05D006407 3.7e-54 215.3 149 73.2
Gohir.A10G243050 Gossypium hirsutum HOM05D001392 ORTHO05D006407 4.9e-54 214.9 149 71.8
Hma1.2p1_0524F.1_g172350 Hydrangea macrophylla HOM05D001392 ORTHO05D006407 6.4e-54 214.5 148 75.0
Actinidia35731 Actinidia chinensis HOM05D001392 ORTHO05D006407 8.3e-54 214.2 149 72.5
Duzib133G1570 Durio zibethinus HOM05D001392 ORTHO05D006407 1.9e-53 213.0 149 71.1
Gohir.D01G222000 Gossypium hirsutum HOM05D001392 ORTHO05D006407 1.9e-53 213.0 150 70.0
Gorai.002G268700 Gossypium raimondii HOM05D001392 ORTHO05D006407 1.9e-53 213.0 150 70.0
Gohir.D07G000800 Gossypium hirsutum HOM05D001392 ORTHO05D014312 9.2e-53 210.7 149 69.8
HanXRQChr10g0283681 Helianthus annuus HOM05D001392 ORTHO05D006407 1.2e-52 210.3 148 73.6
Potri.017G124500 Populus trichocarpa HOM05D001392 ORTHO05D006407 2.7e-52 209.1 147 73.5
SalBow5G1075 Salvia bowleyana HOM05D001392 ORTHO05D006407 2.7e-52 209.1 148 72.3
Manes.02G076200 Manihot esculenta HOM05D001392 ORTHO05D006407 4.6e-52 208.4 149 72.5
PGR004G0453 Punica granatum HOM05D001392 ORTHO05D006407 7.8e-52 207.6 149 70.5
Nitab4.5_0003197g0040 Nicotiana tabacum HOM05D001392 ORTHO05D006407 1.0e-51 207.2 147 73.5
Nn7g38289 Nelumbo nucifera HOM05D001392 ORTHO05D006407 1.3e-51 206.8 148 72.3
QL07p019084 Quercus lobata HOM05D001392 ORTHO05D006407 1.3e-51 206.8 149 70.5
Sopen12g009300 Solanum pennellii HOM05D001392 ORTHO05D006407 1.3e-51 206.8 148 73.6
Ciclev10010998m.g Citrus clementina HOM05D001392 ORTHO05D006407 3.0e-51 205.7 143 74.8
Migut.D01299 Erythranthe guttata HOM05D001392 ORTHO05D006407 3.9e-51 205.3 148 70.9
ECA246G3910 Erigeron canadensis HOM05D001392 ORTHO05D006407 8.6e-51 204.1 147 72.1
PSO384G0294 Papaver somniferum HOM05D001392 ORTHO05D006407 8.6e-51 204.1 149 69.8
PSO339G4038 Papaver somniferum HOM05D001392 ORTHO05D006407 1.1e-50 203.8 149 69.1
Solyc12g019110.3 Solanum lycopersicum HOM05D001392 ORTHO05D006407 1.1e-50 203.8 148 73.0
Cpa.g.sc116.46 Carica papaya HOM05D001392 ORTHO05D006407 1.9e-50 203.0 149 69.8
Glyma.17G186800 Glycine max HOM05D001392 ORTHO05D006407 1.9e-50 203.0 149 69.1
RcHm_v2.0_Chr1g0328051 Rosa chinensis HOM05D001392 ORTHO05D006407 3.3e-50 202.2 149 69.1
TWI74G1301 Tripterygium wilfordii HOM05D001392 ORTHO05D006407 5.6e-50 201.4 149 69.8
GSVIVG01030775001 Vitis vinifera HOM05D001392 ORTHO05D006407 7.3e-50 201.1 149 67.1
Lsat_1_v5_gn_3_65141 Lactuca sativa HOM05D001392 ORTHO05D006407 1.2e-49 200.3 148 70.9
GSVIVG01027222001 Vitis vinifera HOM05D001392 ORTHO05D006407 2.1e-49 199.5 149 67.1
CANSAT71G0007 Cannabis sativa HOM05D001392 ORTHO05D006407 3.6e-49 198.7 149 67.8
Eucgr.F02848 Eucalyptus grandis HOM05D001392 ORTHO05D006407 3.6e-49 198.7 149 69.1
Sed0009589 Sechium edule HOM05D001392 ORTHO05D006407 4.7e-49 198.4 148 66.9
VMungo0464G0907 Vigna mungo HOM05D001392 ORTHO05D006407 4.7e-49 198.4 149 67.8
CAN.G207.6 Capsicum annuum HOM05D001392 ORTHO05D006407 6.2e-49 198.0 147 71.4
FvH4_7g04130 Fragaria vesca HOM05D001392 ORTHO05D006407 6.2e-49 198.0 149 68.5
Gohir.A08G253800 Gossypium hirsutum HOM05D001392 ORTHO05D006407 6.2e-49 198.0 149 68.5
Cfa017719 Carpinus fangiana HOM05D001392 ORTHO05D006407 8.1e-49 197.6 148 68.2
Medtr6g027620 Medicago truncatula HOM05D001392 ORTHO05D006407 8.1e-49 197.6 149 65.1
THA.LOC104827192 Tarenaya hassleriana HOM05D001392 ORTHO05D006407 8.1e-49 197.6 149 67.8
Aa31LG11G12960 Aethionema arabicum HOM05D001392 ORTHO05D006407 1.1e-48 197.2 149 69.1
Psat1g089800 Pisum sativum HOM05D001392 ORTHO05D006407 1.1e-48 197.2 149 65.8
MBI11_g24566_MAGBIO Magnolia biondii HOM05D001392 ORTHO05D006407 1.4e-48 196.8 153 68.0
unitig_749.g13792 Utricularia gibba HOM05D001392 ORTHO05D006407 1.4e-48 196.8 148 66.2
arahy.Tifrunner.gnm1.ann1.0T11RW Arachis hypogaea HOM05D001392 ORTHO05D006407 1.8e-48 196.4 149 67.1
Ca_25679_v3 Cicer arietinum L. HOM05D001392 ORTHO05D006407 1.8e-48 196.4 149 66.4
Phvul.004G073700 Phaseolus vulgaris HOM05D001392 ORTHO05D006407 1.8e-48 196.4 149 67.1
TPR.G35631 Trifolium pratense HOM05D001392 ORTHO05D006407 5.2e-48 194.9 149 65.1
BcaC04g18859 Brassica carinata HOM05D001392 ORTHO05D006407 8.9e-48 194.1 149 67.1
C09p60360 Brassica napus HOM05D001392 ORTHO05D006407 8.9e-48 194.1 149 67.1
BolC9t58869H Brassica oleracea HOM05D001392 ORTHO05D006407 8.9e-48 194.1 149 67.1
CARHR196470 Cardamine hirsuta HOM05D001392 ORTHO05D006407 1.2e-47 193.7 149 67.1
MSTRG.4620 Avicennia marina HOM05D001392 ORTHO05D006407 1.5e-47 193.4 148 65.5
Sp6g27440 Schrenkiella parvula HOM05D001392 ORTHO05D006407 1.5e-47 193.4 149 67.1
Zm00001eb117220 Zea mays HOM05D001392 ORTHO05D006407 1.5e-47 193.4 148 66.2
AL6G27720 Arabidopsis lyrata HOM05D001392 ORTHO05D006407 2.0e-47 193.0 149 66.4
AT5G16715 Arabidopsis thaliana HOM05D001392 ORTHO05D006407 2.0e-47 193.0 149 66.4
CiPaw.09G167000 Carya illinoinensis HOM05D001392 ORTHO05D006407 2.6e-47 192.6 149 63.8
CDE10G1341 Ceratophyllum demersum HOM05D001392 ORTHO05D006407 2.6e-47 192.6 148 62.2
Carub.0006s1493 Capsella rubella HOM05D001392 ORTHO05D006407 3.4e-47 192.2 149 66.4
Aqoxy2G00612 Aquilegia oxysepala HOM05D001392 ORTHO05D006407 4.4e-47 191.8 149 67.8
A10p22510 Brassica napus HOM05D001392 ORTHO05D006407 7.6e-47 191.0 149 66.4
Thhalv10012577m.g Eutrema salsugineum HOM05D001392 ORTHO05D006407 7.6e-47 191.0 149 66.4
Os07g0163500 Oryza sativa ssp. japonica HOM05D001392 ORTHO05D006407 9.9e-47 190.7 147 66.0
CsaV3_3G020830 Cucumis sativus L. HOM05D001392 ORTHO05D006407 1.3e-46 190.3 148 65.5
Lalb_Chr14g0364821 Lupinus albus HOM05D001392 ORTHO05D006407 1.7e-46 189.9 149 65.8
BraA10t44310Z Brassica rapa HOM05D001392 ORTHO05D006407 2.9e-46 189.1 149 65.8
ATR0697G119 Amborella trichopoda HOM05D001392 ORTHO05D006407 3.8e-46 188.7 148 64.9
Gorai.011G296000 Gossypium raimondii HOM05D001392 ORTHO05D006407 3.8e-46 188.7 149 65.8
Haze_20419 Corylus avellana HOM05D001392 ORTHO05D006407 1.4e-45 186.8 180 57.2
DCAR_003434 Daucus carota HOM05D001392 ORTHO05D006407 3.2e-45 185.7 149 67.1
Gohir.A12G276975 Gossypium hirsutum HOM05D001392 ORTHO05D014312 1.7e-43 179.9 164 60.4
SGA_v2.0_scaffold40G15632 Striga asiatica HOM05D001392 ORTHO05D006407 3.6e-41 172.2 137 68.6
MD05G1034800 Malus domestica HOM05D001392 ORTHO05D006407 1.2e-39 167.2 156 61.5
Oeu023509.1 Olea europaea HOM05D001392 ORTHO05D006407 2.6e-39 166.0 123 68.3
FAN13G1017 Fragaria x ananassa HOM05D001392 ORTHO05D006407 1.7e-38 163.3 149 61.1
vmacro18535 Vaccinium macrocarpon HOM05D001392 ORTHO05D006407 1.9e-37 159.8 235 42.6
FAN03G0802 Fragaria x ananassa HOM05D001392 ORTHO05D006407 4.2e-37 158.7 170 55.3
Lj2g0008629 Lotus japonicus HOM05D001392 ORTHO05D006407 1.7e-35 153.3 138 60.1
Mapoly0040s0139 Marchantia polymorpha HOM05D001392 ORTHO05D006407 8.7e-35 151.0 147 51.0
ClCG05G011510 Citrullus lanatus HOM05D001392 ORTHO05D006407 1.9e-34 149.8 180 50.0
Gohir.D10G255000 Gossypium hirsutum HOM05D001392 ORTHO05D006407 1.9e-34 149.8 149 54.4
MD17G1258800 Malus domestica HOM05D001392 ORTHO05D014312 4.8e-33 145.2 134 60.4
Rhsim08G0018500 Rhododendron simsii HOM05D001392 ORTHO05D006407 1.2e-31 140.6 281 36.3
Pp3c12_13790 Physcomitrium patens HOM05D001392 ORTHO05D006407 7.6e-31 137.9 146 49.3
Lj4A264G50 Lonicera japonica HOM05D001392 ORTHO05D006407 6.4e-30 134.8 93 69.9
MD09G1264400 Malus domestica HOM05D001392 ORTHO05D006407 6.0e-28 128.3 93 69.9
MELO3C020199.2 Cucumis melo HOM05D001392 ORTHO05D006407 1.9e-26 123.2 148 46.6
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 5.6e-26 121.7 82 74.4
Gorai.008G298900 Gossypium raimondii HOM05D001392 ORTHO05D014312 5.6e-26 121.7 82 74.4
Gorai.002G172800 Gossypium raimondii HOM05D001392 ORTHO05D029905 9.6e-26 120.9 92 63.0
Sabra17G0105100 Salix brachista HOM05D001392 ORTHO05D006407 1.6e-25 120.2 136 56.6
Gohir.D01G140701 Gossypium hirsutum HOM05D001392 ORTHO05D029905 3.7e-25 119.0 88 64.8
arahy.Tifrunner.gnm1.ann1.XLS2Y4 Arachis hypogaea HOM05D001392 ORTHO05D006407 6.2e-25 118.2 93 63.4
Hma1.2p1_0524F.1_g172370 Hydrangea macrophylla HOM05D001392 ORTHO05D014312 5.3e-24 115.2 78 75.6
Nitab4.5_0001206g0010 Nicotiana tabacum HOM05D001392 ORTHO05D014312 5.3e-24 115.2 77 76.6
Hma1.2p1_1840F.1_g304940 Hydrangea macrophylla HOM05D001392 ORTHO05D014312 6.9e-24 114.8 78 75.6
Actinidia28813 Actinidia chinensis HOM05D001392 ORTHO05D014312 7.6e-23 111.3 91 63.7
Sc14g0006490 Simmondsia chinensis HOM05D001392 ORTHO05D006407 3.2e-21 105.9 69 75.4
TAR623G1183 Trochodendron aralioides HOM05D001392 ORTHO05D006407 3.2e-21 105.9 75 68.0
MCO14G022 Micromonas commoda HOM05D001392 ORTHO05D006407 4.6e-20 102.1 154 36.4
Cre07.g350500 Chlamydomonas reinhardtii HOM05D001392 ORTHO05D006407 1.8e-19 100.1 155 36.8
Gorai.N015700 Gossypium raimondii HOM05D001392 ORTHO05D029905 5.1e-19 98.6 114 47.4
BcaC04g18858 Brassica carinata HOM05D001392 ORTHO05D014312 2.5e-18 96.3 100 56.0
Gorai.008G298700 Gossypium raimondii HOM05D001392 ORTHO05D006407 1.6e-17 93.6 69 63.8
SEGI_33021 Sequoiadendron giganteum HOM05D001392 ORTHO05D014312 1.1e-16 90.9 77 57.1
PRCOL_00006335 Prasinoderma coloniale HOM05D001392 ORTHO05D006407 1.4e-16 90.5 160 35.6
Peaxi162Scf00057g02723 Petunia axillaris HOM05D001392 ORTHO05D014312 3.4e-15 85.9 56 78.6
MD09G1264300 Malus domestica HOM05D001392 ORTHO05D014312 4.5e-15 85.5 55 74.5
SEGI_11941 Sequoiadendron giganteum HOM05D001392 ORTHO05D029905 4.2e-13 79.0 68 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2529 Anthoceros agrestis HOM05D001392 ORTHO05D006407 9.3e-13 77.8 64 56.2


User provided reference genes

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