Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037495 Chenopodium quinoa HOM05D000113 ORTHO05D002571 2.5e-131 472.2 262 100.0
AUR62033485 Chenopodium quinoa HOM05D000113 ORTHO05D002571 1.0e-44 184.5 266 45.9
AUR62011095 Chenopodium quinoa HOM05D000113 ORTHO05D002571 2.7e-40 169.9 207 52.7
AUR62002552 Chenopodium quinoa HOM05D000113 ORTHO05D002571 2.9e-34 149.8 281 40.2
EL10Ac3g06248 Beta vulgaris HOM05D000113 ORTHO05D002571 1.1e-33 147.9 252 41.3
CsaV3_1G002800 Cucumis sativus L. HOM05D000113 ORTHO05D002571 8.6e-31 138.3 198 41.9
Ah.13g073050 Amaranthus hybridus HOM05D000113 ORTHO05D002571 1.1e-30 137.9 188 46.3
Sc10g0009750 Simmondsia chinensis HOM05D000113 ORTHO05D002571 1.1e-30 137.9 261 38.3
TAR374G0746 Trochodendron aralioides HOM05D000113 ORTHO05D002571 1.9e-30 137.1 198 42.9
Eucgr.K02505 Eucalyptus grandis HOM05D000113 ORTHO05D002571 2.5e-30 136.7 216 42.6
Potri.015G008700 Populus trichocarpa HOM05D000113 ORTHO05D002571 3.3e-30 136.3 270 38.1
Nn2g13470 Nelumbo nucifera HOM05D000113 ORTHO05D002571 5.6e-30 135.6 187 46.5
MD06G1200100 Malus domestica HOM05D000113 ORTHO05D002571 9.5e-30 134.8 242 38.0
MELO3C017216.2 Cucumis melo HOM05D000113 ORTHO05D002571 1.2e-29 134.4 251 35.9
Gorai.008G197200 Gossypium raimondii HOM05D000113 ORTHO05D002571 1.1e-28 131.3 208 40.9
Rhsim12G0152100 Rhododendron simsii HOM05D000113 ORTHO05D002571 1.1e-28 131.3 247 36.4
CiPaw.11G050600 Carya illinoinensis HOM05D000113 ORTHO05D002571 1.4e-28 131.0 262 37.0
COL.COLO4_22215 Corchorus olitorius HOM05D000113 ORTHO05D002571 1.4e-28 131.0 261 36.0
GSVIVG01007911001 Vitis vinifera HOM05D000113 ORTHO05D002571 1.4e-28 131.0 261 35.6
Manes.13G073000 Manihot esculenta HOM05D000113 ORTHO05D002571 1.8e-28 130.6 261 36.8
Medtr3g023880 Medicago truncatula HOM05D000113 ORTHO05D002571 1.8e-28 130.6 267 35.6
Thecc.03G097900 Theobroma cacao HOM05D000113 ORTHO05D002571 1.8e-28 130.6 261 35.6
Gohir.A12G181200 Gossypium hirsutum HOM05D000113 ORTHO05D002571 2.3e-28 130.2 274 37.2
Sed0009402 Sechium edule HOM05D000113 ORTHO05D002571 2.3e-28 130.2 251 34.7
TPR.G12156 Trifolium pratense HOM05D000113 ORTHO05D002571 2.3e-28 130.2 267 35.6
Cfa019308 Carpinus fangiana HOM05D000113 ORTHO05D002571 6.8e-28 128.6 238 37.8
Oeu008272.2 Olea europaea HOM05D000113 ORTHO05D002571 6.8e-28 128.6 198 40.9
Haze_02454 Corylus avellana HOM05D000113 ORTHO05D002571 1.5e-27 127.5 255 36.5
Aqoxy3G03585 Aquilegia oxysepala HOM05D000113 ORTHO05D002571 2.0e-27 127.1 265 35.8
Psat0s3790g0040 Pisum sativum HOM05D000113 ORTHO05D002571 2.0e-27 127.1 267 35.2
Duzib205G1857 Durio zibethinus HOM05D000113 ORTHO05D002571 2.6e-27 126.7 261 35.6
Gohir.D12G183900 Gossypium hirsutum HOM05D000113 ORTHO05D002571 2.6e-27 126.7 274 36.9
Solyc03g115390.4 Solanum lycopersicum HOM05D000113 ORTHO05D002571 2.6e-27 126.7 252 36.5
Actinidia35027 Actinidia chinensis HOM05D000113 ORTHO05D002571 3.4e-27 126.3 261 36.0
ATR0064G016 Amborella trichopoda HOM05D000113 ORTHO05D002571 3.4e-27 126.3 256 36.3
Dinv38794 Davidia involucrata HOM05D000113 ORTHO05D002571 3.4e-27 126.3 264 36.4
vmacro16510 Vaccinium macrocarpon HOM05D000113 ORTHO05D002571 3.4e-27 126.3 224 36.6
Glyma.06G201700 Glycine max HOM05D000113 ORTHO05D002571 4.4e-27 125.9 258 33.7
SalBow7G4123 Salvia bowleyana HOM05D000113 ORTHO05D002571 4.4e-27 125.9 198 40.9
PGSC0003DMG402024649 Solanum tuberosum HOM05D000113 ORTHO05D002571 4.4e-27 125.9 252 36.1
AUR62029967 Chenopodium quinoa HOM05D000113 ORTHO05D002571 5.8e-27 125.6 206 42.2
Lj5C105T19 Lonicera japonica HOM05D000113 ORTHO05D002571 5.8e-27 125.6 263 36.9
Ca_13800_v3 Cicer arietinum L. HOM05D000113 ORTHO05D002571 7.6e-27 125.2 266 35.0
Phvul.009G193400 Phaseolus vulgaris HOM05D000113 ORTHO05D002571 7.6e-27 125.2 261 35.6
Prupe.6G159800 Prunus persica HOM05D000113 ORTHO05D002571 7.6e-27 125.2 260 34.2
RhsimUnG0148700 Rhododendron simsii HOM05D000113 ORTHO05D002571 7.6e-27 125.2 255 35.3
arahy.Tifrunner.gnm1.ann1.LUB4JJ Arachis hypogaea HOM05D000113 ORTHO05D002571 9.9e-27 124.8 269 33.5
Lalb_Chr13g0294241 Lupinus albus HOM05D000113 ORTHO05D002571 9.9e-27 124.8 256 34.4
Prupe.5G201700 Prunus persica HOM05D000113 ORTHO05D002571 9.9e-27 124.8 260 35.0
arahy.Tifrunner.gnm1.ann1.U2PNLV Arachis hypogaea HOM05D000113 ORTHO05D002571 1.3e-26 124.4 267 33.3
Rhsim06G0025800 Rhododendron simsii HOM05D000113 ORTHO05D002571 1.3e-26 124.4 255 34.5
Atru.chr12.1785 Acer truncatum HOM05D000113 ORTHO05D002571 2.2e-26 123.6 252 34.1
Haze_07691 Corylus avellana HOM05D000113 ORTHO05D002571 2.2e-26 123.6 245 36.3
QL93p0191_0033 Quercus lobata HOM05D000113 ORTHO05D002571 2.2e-26 123.6 211 39.3
Actinidia19008 Actinidia chinensis HOM05D000113 ORTHO05D002571 2.9e-26 123.2 236 38.1
AT1G32490 Arabidopsis thaliana HOM05D000113 ORTHO05D002571 3.7e-26 122.9 257 35.4
QL10p018828 Quercus lobata HOM05D000113 ORTHO05D002571 3.7e-26 122.9 249 34.9
Cfa004955 Carpinus fangiana HOM05D000113 ORTHO05D002571 4.9e-26 122.5 256 35.9
SGA_v2.0_scaffold7G04034 Striga asiatica HOM05D000113 ORTHO05D002571 4.9e-26 122.5 145 47.6
THA.LOC104812747 Tarenaya hassleriana HOM05D000113 ORTHO05D002571 4.9e-26 122.5 258 36.0
RcHm_v2.0_Chr7g0182681 Rosa chinensis HOM05D000113 ORTHO05D002571 8.3e-26 121.7 248 36.3
AL1G46740 Arabidopsis lyrata HOM05D000113 ORTHO05D002571 2.4e-25 120.2 258 34.5
CSS0000469 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D002571 4.1e-25 119.4 261 36.0
CARHR031940 Cardamine hirsuta HOM05D000113 ORTHO05D002571 5.4e-25 119.0 257 34.6
PSO409G0035 Papaver somniferum HOM05D000113 ORTHO05D002571 5.4e-25 119.0 199 40.2
PGR044G1093 Punica granatum HOM05D000113 ORTHO05D002571 5.4e-25 119.0 265 36.6
Aa31LG2G13460 Aethionema arabicum HOM05D000113 ORTHO05D002571 7.1e-25 118.6 251 35.9
Migut.D01678 Erythranthe guttata HOM05D000113 ORTHO05D002571 7.1e-25 118.6 252 35.3
DCAR_021511 Daucus carota HOM05D000113 ORTHO05D002571 9.2e-25 118.2 251 33.9
Thhalv10017881m.g Eutrema salsugineum HOM05D000113 ORTHO05D002571 9.2e-25 118.2 261 34.5
Lj6g0016007 Lotus japonicus HOM05D000113 ORTHO05D002571 9.2e-25 118.2 267 33.3
ECA232G2775 Erigeron canadensis HOM05D000113 ORTHO05D002571 1.2e-24 117.9 257 34.2
Thhalv10006650m.g Eutrema salsugineum HOM05D000113 ORTHO05D002571 1.2e-24 117.9 261 35.6
Hma1.2p1_0060F.1_g033270 Hydrangea macrophylla HOM05D000113 ORTHO05D002571 2.1e-24 117.1 273 34.4
MD08G1042900 Malus domestica HOM05D000113 ORTHO05D002571 3.5e-24 116.3 260 34.2
QL10p018794 Quercus lobata HOM05D000113 ORTHO05D002571 3.5e-24 116.3 219 38.4
FvH4_5g14240 Fragaria vesca HOM05D000113 ORTHO05D002571 4.6e-24 115.9 260 35.4
HanXRQChr09g0270171 Helianthus annuus HOM05D000113 ORTHO05D002571 4.6e-24 115.9 261 33.3
MD07G1285300 Malus domestica HOM05D000113 ORTHO05D002571 4.6e-24 115.9 219 37.0
Cc04_g15020 Coffea canephora HOM05D000113 ORTHO05D002571 6.0e-24 115.5 291 32.6
FAN18G0690 Fragaria x ananassa HOM05D000113 ORTHO05D002571 6.0e-24 115.5 260 35.4
PSO063G4203 Papaver somniferum HOM05D000113 ORTHO05D002571 6.0e-24 115.5 279 34.1
Lj1g0013131 Lotus japonicus HOM05D000113 ORTHO05D002571 1.0e-23 114.8 187 41.2
Sp1g28410 Schrenkiella parvula HOM05D000113 ORTHO05D002571 1.0e-23 114.8 261 34.9
FAN08G1023 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.3e-23 114.4 254 34.6
Lsat_1_v5_gn_6_69341 Lactuca sativa HOM05D000113 ORTHO05D002571 1.3e-23 114.4 254 34.3
Carub.0001s3090 Capsella rubella HOM05D000113 ORTHO05D002571 2.3e-23 113.6 251 35.1
AL7G28140 Arabidopsis lyrata HOM05D000113 ORTHO05D002571 3.0e-23 113.2 266 33.1
CDE02G1559 Ceratophyllum demersum HOM05D000113 ORTHO05D002571 3.9e-23 112.8 178 39.9
Medtr1g010030 Medicago truncatula HOM05D000113 ORTHO05D002571 5.1e-23 112.5 258 33.3
VMungo1127G1561 Vigna mungo HOM05D000113 ORTHO05D002571 5.1e-23 112.5 267 32.6
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 6.6e-23 112.1 301 31.9
Sp4g17550 Schrenkiella parvula HOM05D000113 ORTHO05D002571 6.6e-23 112.1 260 34.6
Aa31LG7G3630 Aethionema arabicum HOM05D000113 ORTHO05D002571 8.6e-23 111.7 198 40.4
HPP92_010044 Vanilla planifolia HOM05D000113 ORTHO05D002571 1.5e-22 110.9 205 36.1
Sabra15G0072600 Salix brachista HOM05D000113 ORTHO05D002571 1.9e-22 110.5 319 31.7
CAN.G686.8 Capsicum annuum HOM05D000113 ORTHO05D002571 2.5e-22 110.2 256 33.2
THA.LOC104812748 Tarenaya hassleriana HOM05D000113 ORTHO05D002571 2.5e-22 110.2 199 38.7
A05p24800 Brassica napus HOM05D000113 ORTHO05D002571 4.3e-22 109.4 249 34.1
BraA05t21363Z Brassica rapa HOM05D000113 ORTHO05D002571 4.3e-22 109.4 249 34.1
SEGI_02990 Sequoiadendron giganteum HOM05D000113 ORTHO05D002571 4.3e-22 109.4 266 33.5
Aa31LG9G8960 Aethionema arabicum HOM05D000113 ORTHO05D002571 9.6e-22 108.2 252 36.1
AL4G31370 Arabidopsis lyrata HOM05D000113 ORTHO05D002571 9.6e-22 108.2 260 32.7
FAN13G1324 Fragaria x ananassa HOM05D000113 ORTHO05D002571 9.6e-22 108.2 186 41.9
Sabra15G0070200 Salix brachista HOM05D000113 ORTHO05D002571 1.2e-21 107.8 323 31.6
Lsat_1_v5_gn_9_24861 Lactuca sativa HOM05D000113 ORTHO05D002571 1.6e-21 107.5 265 33.2
Aa31LG7G3740 Aethionema arabicum HOM05D000113 ORTHO05D002571 2.1e-21 107.1 275 32.7
Migut.G00488 Erythranthe guttata HOM05D000113 ORTHO05D002571 2.1e-21 107.1 270 34.4
unitig_8.g2956 Utricularia gibba HOM05D000113 ORTHO05D002571 2.1e-21 107.1 252 32.5
BcaB06g29390 Brassica carinata HOM05D000113 ORTHO05D002571 2.8e-21 106.7 267 33.3
C05p38490 Brassica napus HOM05D000113 ORTHO05D002571 8.1e-21 105.1 240 33.8
BolC5t32583H Brassica oleracea HOM05D000113 ORTHO05D002571 8.1e-21 105.1 240 33.8
Sabra15G0050100 Salix brachista HOM05D000113 ORTHO05D002571 1.1e-20 104.8 328 30.8
Glyma.01G040900 Glycine max HOM05D000113 ORTHO05D002571 1.8e-20 104.0 266 32.0
HanXRQChr10g0308651 Helianthus annuus HOM05D000113 ORTHO05D002571 2.4e-20 103.6 205 36.6
MD02G1072500 Malus domestica HOM05D000113 ORTHO05D002571 2.4e-20 103.6 258 31.8
AT2G35340 Arabidopsis thaliana HOM05D000113 ORTHO05D002571 4.0e-20 102.8 260 31.9
TWI73G0006 Tripterygium wilfordii HOM05D000113 ORTHO05D002571 4.0e-20 102.8 262 32.4
Carub.0004s1703 Capsella rubella HOM05D000113 ORTHO05D002571 6.8e-20 102.1 260 33.5
Sopen03g034400 Solanum pennellii HOM05D000113 ORTHO05D002571 6.8e-20 102.1 316 31.0
CAN.G479.25 Capsicum annuum HOM05D000113 ORTHO05D002571 8.9e-20 101.7 244 35.2
FvH4_1g06760 Fragaria vesca HOM05D000113 ORTHO05D002571 3.4e-19 99.8 200 34.5
EL10Ac8g18624 Beta vulgaris HOM05D000113 ORTHO05D002571 4.4e-19 99.4 237 35.4
Peaxi162Scf00201g00132 Petunia axillaris HOM05D000113 ORTHO05D002571 4.4e-19 99.4 170 37.1
RcHm_v2.0_Chr2g0092491 Rosa chinensis HOM05D000113 ORTHO05D002571 9.9e-19 98.2 263 31.2
Ca_23233_v3 Cicer arietinum L. HOM05D000113 ORTHO05D002571 8.4e-18 95.1 263 30.8
Nitab4.5_0004284g0070 Nicotiana tabacum HOM05D000113 ORTHO05D002571 1.4e-17 94.4 170 37.1
AagrBONN_evm.TU.Sc2ySwM_228.1831 Anthoceros agrestis HOM05D000113 ORTHO05D002571 1.9e-17 94.0 251 28.7
Medtr5g075310 Medicago truncatula HOM05D000113 ORTHO05D002571 1.9e-17 94.0 219 29.2
Sed0024832 Sechium edule HOM05D000113 ORTHO05D002571 1.9e-17 94.0 206 33.5
Dinv22270 Davidia involucrata HOM05D000113 ORTHO05D002571 3.2e-17 93.2 219 33.8
SEGI_21928 Sequoiadendron giganteum HOM05D000113 ORTHO05D002571 3.2e-17 93.2 133 44.4
BcaC05g27851 Brassica carinata HOM05D000113 ORTHO05D002571 1.2e-16 91.3 237 30.8
DCAR_003991 Daucus carota HOM05D000113 ORTHO05D002571 1.2e-16 91.3 221 29.9
Ca_26393_v3 Cicer arietinum L. HOM05D000113 ORTHO05D002571 2.1e-16 90.5 239 31.4
Pp3c1_18490 Physcomitrium patens HOM05D000113 ORTHO05D002571 2.1e-16 90.5 257 32.3
FAN23G0734 Fragaria x ananassa HOM05D000113 ORTHO05D002571 3.5e-16 89.7 249 29.3
Sabra15G0050600 Salix brachista HOM05D000113 ORTHO05D002571 4.6e-16 89.4 154 40.3
Sabra15G0006800 Salix brachista HOM05D000113 ORTHO05D002571 1.0e-15 88.2 177 37.9
Sabra15G0050000 Salix brachista HOM05D000113 ORTHO05D002571 1.3e-15 87.8 245 32.7
Sabra15G0050300 Salix brachista HOM05D000113 ORTHO05D002571 1.3e-15 87.8 334 27.8
Medtr6g061840 Medicago truncatula HOM05D000113 ORTHO05D002571 1.7e-15 87.4 245 30.2
Psat1g109600 Pisum sativum HOM05D000113 ORTHO05D002571 1.7e-15 87.4 249 29.7
Prupe.8G103900 Prunus persica HOM05D000113 ORTHO05D002571 1.7e-15 87.4 262 31.7
CARHR223200 Cardamine hirsuta HOM05D000113 ORTHO05D002571 2.3e-15 87.0 197 34.5
Thhalv10024349m.g Eutrema salsugineum HOM05D000113 ORTHO05D002571 3.9e-15 86.3 239 31.8
SMO356G0256 Selaginella moellendorffii HOM05D000113 ORTHO05D002571 6.6e-15 85.5 198 31.8
A01p20620 Brassica napus HOM05D000113 ORTHO05D002571 3.3e-14 83.2 234 32.9
Lalb_Chr07g0187381 Lupinus albus HOM05D000113 ORTHO05D002571 3.3e-14 83.2 141 35.5
Mapoly0054s0103 Marchantia polymorpha HOM05D000113 ORTHO05D002571 3.3e-14 83.2 285 28.1
Prupe.8G104500 Prunus persica HOM05D000113 ORTHO05D002571 3.3e-14 83.2 252 31.3
Aqoxy3G02608 Aquilegia oxysepala HOM05D000113 ORTHO05D002571 5.6e-14 82.4 183 33.9
Sp7g15290 Schrenkiella parvula HOM05D000113 ORTHO05D002571 7.3e-14 82.0 199 31.7
BraA01t01989Z Brassica rapa HOM05D000113 ORTHO05D002571 3.6e-13 79.7 265 30.6
CSS0030678 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D002571 3.6e-13 79.7 227 30.4
Nitab4.5_0000219g0080 Nicotiana tabacum HOM05D000113 ORTHO05D002571 4.8e-13 79.3 200 32.5
FvH4_1g06770 Fragaria vesca HOM05D000113 ORTHO05D002571 6.2e-13 79.0 208 30.8
FAN19G0651 Fragaria x ananassa HOM05D000113 ORTHO05D002571 6.2e-13 79.0 208 30.8
Sopen09g005800 Solanum pennellii HOM05D000113 ORTHO05D002571 8.1e-13 78.6 259 30.9
FAN23G0944 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.1e-12 78.2 201 30.8
Nitab4.5_0008517g0020 Nicotiana tabacum HOM05D000113 ORTHO05D002571 1.1e-12 78.2 208 30.3
RcHm_v2.0_Chr2g0092541 Rosa chinensis HOM05D000113 ORTHO05D002571 3.1e-12 76.6 246 27.6
Atru.chr11.2088 Acer truncatum HOM05D000113 ORTHO05D002571 4.0e-12 76.3 218 28.4
BcaC09g50398 Brassica carinata HOM05D000113 ORTHO05D002571 4.0e-12 76.3 230 31.7
BcaNung00162 Brassica carinata HOM05D000113 ORTHO05D002571 4.0e-12 76.3 199 32.7
C01p25960 Brassica napus HOM05D000113 ORTHO05D002571 4.0e-12 76.3 230 31.7
BolC1t02541H Brassica oleracea HOM05D000113 ORTHO05D002571 4.0e-12 76.3 230 31.7
CBR_g24329 Chara braunii HOM05D000113 ORTHO05D002571 5.3e-12 75.9 252 27.4
Ciclev10023841m.g Citrus clementina HOM05D000113 ORTHO05D002571 5.3e-12 75.9 204 29.9
Ah.13g072960 Amaranthus hybridus HOM05D000113 ORTHO05D002571 1.2e-11 74.7 180 34.4
Nitab4.5_0001127g0110 Nicotiana tabacum HOM05D000113 ORTHO05D002571 4.4e-11 72.8 137 35.8
Sed0002514 Sechium edule HOM05D000113 ORTHO05D002571 5.8e-11 72.4 259 29.3
HanXRQChr12g0377681 Helianthus annuus HOM05D000113 ORTHO05D002571 9.9e-11 71.6 135 38.5
Nitab4.5_0004622g0020 Nicotiana tabacum HOM05D000113 ORTHO05D002571 9.9e-11 71.6 174 33.9
Cc02_g13160 Coffea canephora HOM05D000113 ORTHO05D002571 1.3e-10 71.2 138 34.8
FAN26G0107 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.3e-10 71.2 121 37.2
FAN26G1920 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.3e-10 71.2 121 37.2
DCAR_026352 Daucus carota HOM05D000113 ORTHO05D002571 2.9e-10 70.1 261 28.4
Peaxi162Scf00006g00353 Petunia axillaris HOM05D000113 ORTHO05D002571 2.4e-09 67.0 174 32.2
TPR.G10664 Trifolium pratense HOM05D000113 ORTHO05D002571 3.2e-09 66.6 149 30.2
ECA238G0411 Erigeron canadensis HOM05D000113 ORTHO05D002571 7.1e-09 65.5 201 28.9
AT4G16680 Arabidopsis thaliana HOM05D000113 ORTHO05D002571 1.6e-08 64.3 110 37.3
Hund13422 Selenicereus undatus HOM05D000113 ORTHO05D002571 6.0e-08 62.4 196 26.0
TWI81G1049 Tripterygium wilfordii HOM05D000113 ORTHO05D002571 6.0e-08 62.4 256 27.7
CAN.G321.46 Capsicum annuum HOM05D000113 ORTHO05D002571 8.7e-07 58.5 141 34.0
Nitab4.5_0001410g0130 Nicotiana tabacum HOM05D000113 ORTHO05D002571 1.1e-06 58.2 178 30.9
PGSC0003DMG400002239 Solanum tuberosum HOM05D000113 ORTHO05D002571 7.3e-06 55.5 246 26.0


User provided reference genes

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