Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 9.2e-284 979.5 498 100.0
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 9.0e-271 936.4 498 95.8
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 1.1e-249 866.3 497 88.5
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 1.8e-231 805.8 498 82.7
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 1.7e-216 756.1 509 77.4
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 1.4e-202 709.9 492 73.4
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 1.8e-199 699.5 496 72.6
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 1.2e-198 696.8 503 71.2
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 2.9e-197 692.2 497 72.8
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 5.0e-197 691.4 503 71.0
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 1.5e-196 689.9 462 74.2
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 1.2e-195 686.8 458 75.1
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 1.4e-194 683.3 496 71.2
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 2.3e-194 682.6 478 72.6
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 2.9e-192 675.6 494 70.9
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 2.9e-192 675.6 430 78.4
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 1.8e-191 672.9 454 74.9
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 1.2e-190 670.2 435 76.3
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 2.0e-190 669.5 433 76.7
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 2.0e-190 669.5 428 76.9
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 3.5e-190 668.7 456 73.2
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 4.6e-190 668.3 483 70.0
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 5.9e-190 667.9 442 74.9
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 1.3e-189 666.8 436 75.0
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 1.3e-189 666.8 428 77.3
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 1.3e-189 666.8 471 71.1
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 2.3e-189 666.0 472 71.2
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 3.9e-189 665.2 449 73.7
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 3.9e-189 665.2 455 73.6
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 6.6e-189 664.5 495 69.3
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 1.1e-188 663.7 429 74.6
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 1.5e-188 663.3 490 68.8
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 1.2e-187 660.2 453 73.5
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 1.6e-187 659.8 432 75.0
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 1.6e-187 659.8 430 75.8
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 2.1e-187 659.4 430 76.3
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 2.1e-187 659.4 444 74.3
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 8.0e-187 657.5 427 75.9
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 8.0e-187 657.5 460 72.4
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 1.0e-186 657.1 460 72.2
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 1.4e-186 656.8 438 75.1
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 4.0e-186 655.2 427 74.0
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 6.8e-186 654.4 447 72.7
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 1.2e-185 653.7 516 66.5
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 2.0e-185 652.9 506 66.6
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 2.6e-185 652.5 429 76.5
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 2.6e-185 652.5 426 76.1
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 4.4e-185 651.7 447 72.0
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 4.4e-185 651.7 448 72.1
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 7.5e-185 651.0 428 74.8
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 7.5e-185 651.0 494 68.0
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 1.3e-184 650.2 461 70.7
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 2.2e-184 649.4 428 74.5
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 2.9e-184 649.0 438 74.0
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 2.9e-184 649.0 427 74.0
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 6.4e-184 647.9 430 75.1
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 6.4e-184 647.9 449 72.6
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 8.3e-184 647.5 493 67.3
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 1.1e-183 647.1 499 67.3
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 1.1e-183 647.1 499 67.3
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 1.4e-183 646.7 428 74.1
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 1.9e-183 646.4 427 73.8
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 4.1e-183 645.2 430 74.9
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 9.2e-183 644.0 430 73.5
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 1.6e-182 643.3 428 74.1
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 1.6e-182 643.3 428 73.8
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 3.5e-182 642.1 427 72.8
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 1.3e-181 640.2 434 73.3
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 1.3e-181 640.2 504 66.5
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 1.3e-181 640.2 430 73.0
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.7e-181 639.8 455 71.4
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 1.7e-181 639.8 445 72.1
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 1.7e-181 639.8 456 69.1
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 2.3e-181 639.4 469 69.1
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 2.3e-181 639.4 445 73.3
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 2.3e-181 639.4 447 73.2
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 3.0e-181 639.0 473 68.5
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 3.9e-181 638.6 499 66.5
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 5.0e-181 638.3 454 71.6
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 8.6e-181 637.5 429 73.4
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 1.1e-180 637.1 494 67.2
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 1.5e-180 636.7 502 65.7
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.9e-180 636.3 492 68.3
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.9e-180 636.3 492 68.3
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.9e-180 636.3 427 73.8
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 2.5e-180 636.0 427 73.3
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 3.3e-180 635.6 445 72.6
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 5.6e-180 634.8 437 70.9
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 5.6e-180 634.8 436 71.3
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 1.2e-179 633.6 445 73.0
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 1.8e-178 629.8 560 61.1
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.2e-177 627.1 421 73.4
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 1.2e-177 627.1 431 71.0
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 4.4e-177 625.2 439 70.4
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 5.8e-177 624.8 438 70.1
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.9e-176 621.7 427 72.8
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 8.3e-176 620.9 437 70.3
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 5.1e-173 611.7 429 70.4
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 6.6e-173 611.3 441 68.5
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 3.3e-172 609.0 457 65.6
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 7.3e-172 607.8 467 65.1
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.1e-170 604.0 423 71.4
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 2.9e-168 595.9 472 64.8
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 6.4e-168 594.7 431 66.4
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 1.1e-164 583.9 434 65.4
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 6.2e-163 578.2 472 65.9
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 8.1e-163 577.8 443 63.9
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 1.2e-161 573.9 428 64.3
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 3.9e-157 558.9 495 60.2
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 1.6e-150 537.0 445 59.6
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 8.1e-147 524.6 373 69.2
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.5e-145 520.4 311 82.0
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 4.8e-139 498.8 427 61.4
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 3.1e-138 496.1 431 61.0
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 1.5e-137 493.8 434 57.4
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 4.2e-135 485.7 532 48.9
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 7.1e-135 485.0 487 55.0
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 2.1e-131 473.4 481 50.9
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 2.3e-125 453.4 413 58.4
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 8.2e-107 391.7 326 63.5
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.2e-99 365.2 234 75.2
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 2.7e-86 323.6 430 41.4
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 5.4e-82 309.3 397 46.6
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 8.9e-77 292.0 257 62.3
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 3.4e-76 290.0 226 62.8
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 4.9e-75 286.2 351 48.1
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 2.0e-68 264.2 228 63.2
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.6e-65 254.6 174 73.0
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 1.1e-63 248.4 331 47.7
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 6.2e-62 242.7 297 41.8
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 8.1e-62 242.3 378 37.0
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 7.1e-50 202.6 385 36.6
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 3.9e-48 196.8 153 66.0
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.6e-38 164.9 113 69.0
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 6.9e-37 159.5 130 65.4
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.1e-33 147.9 96 71.9
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 6.0e-25 119.8 67 83.6
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 2.1e-22 111.3 78 65.4
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 1.1e-21 109.0 135 48.9
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 3.1e-21 107.5 57 87.7
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 3.1e-21 107.5 82 67.1
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 6.5e-19 99.8 69 71.0
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 4.2e-18 97.1 85 64.7
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 8.2e-14 82.8 53 69.8
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 8.2e-14 82.8 53 69.8
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 1.0e-11 75.9 62 58.1
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 5.5e-10 70.1 72 55.6


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