Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 2.6e-278 961.4 498 100.0
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 6.9e-271 936.8 498 95.8
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 8.4e-245 850.1 497 86.5
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 1.6e-227 792.7 498 81.1
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 1.9e-212 742.7 510 75.3
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 1.1e-199 700.3 492 72.2
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 6.6e-197 691.0 496 71.8
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 7.2e-196 687.6 503 70.2
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 2.8e-195 685.6 497 72.4
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 2.3e-194 682.6 462 73.4
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 3.0e-194 682.2 503 70.0
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 5.7e-193 677.9 458 74.2
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 1.8e-191 672.9 492 70.1
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 2.4e-191 672.5 478 71.5
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 9.2e-191 670.6 478 71.5
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 3.5e-190 668.7 502 70.3
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 1.3e-189 666.8 454 73.8
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 1.9e-188 662.9 435 75.4
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 3.3e-188 662.1 428 75.7
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 4.3e-188 661.8 433 76.2
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 4.3e-188 661.8 456 72.6
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 7.3e-188 661.0 483 69.2
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 7.3e-188 661.0 491 68.4
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 3.6e-187 658.7 466 71.5
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 3.6e-187 658.7 467 71.1
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 3.6e-187 658.7 476 70.2
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 6.2e-187 657.9 428 76.2
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 1.8e-186 656.4 498 66.9
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 1.8e-186 656.4 490 69.6
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 3.1e-186 655.6 447 72.5
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 8.9e-186 654.1 455 72.1
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 8.9e-186 654.1 487 69.4
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 1.2e-185 653.7 429 73.4
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 2.6e-185 652.5 507 66.5
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 3.4e-185 652.1 444 73.6
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 7.5e-185 651.0 430 75.1
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 9.8e-185 650.6 438 74.4
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 1.3e-184 650.2 506 66.4
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 1.7e-184 649.8 505 66.5
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 1.7e-184 649.8 460 71.3
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 3.7e-184 648.7 460 71.3
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 4.9e-184 648.3 447 71.8
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 8.3e-184 647.5 494 67.6
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 1.1e-183 647.1 427 74.5
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 1.1e-183 647.1 427 73.1
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 1.9e-183 646.4 429 75.8
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 1.9e-183 646.4 473 68.3
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 3.2e-183 645.6 507 65.9
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 3.2e-183 645.6 447 71.1
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 3.2e-183 645.6 448 71.2
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 7.0e-183 644.4 493 66.9
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 7.0e-183 644.4 449 71.9
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 7.0e-183 644.4 516 65.7
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 7.0e-183 644.4 426 75.1
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 1.6e-182 643.3 438 73.1
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 2.7e-182 642.5 499 67.1
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 2.7e-182 642.5 499 67.1
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 2.7e-182 642.5 430 74.4
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 2.7e-182 642.5 427 73.5
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 4.6e-182 641.7 430 74.4
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 4.6e-182 641.7 428 73.4
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 3.0e-181 639.0 428 73.6
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 3.0e-181 639.0 495 66.1
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 3.0e-181 639.0 428 73.4
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 3.0e-181 639.0 427 73.1
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 3.9e-181 638.6 504 66.3
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 5.0e-181 638.3 428 72.9
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 1.9e-180 636.3 434 72.8
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 4.3e-180 635.2 427 72.4
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 5.6e-180 634.8 456 68.4
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 7.3e-180 634.4 494 66.8
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 3.6e-179 632.1 429 72.7
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 4.7e-179 631.7 476 67.0
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 4.7e-179 631.7 487 66.7
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 4.7e-179 631.7 455 70.5
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 6.2e-179 631.3 498 65.7
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 8.1e-179 630.9 499 64.9
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 8.1e-179 630.9 473 67.7
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 1.8e-178 629.8 467 68.1
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 1.8e-178 629.8 447 72.0
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 2.3e-178 629.4 477 66.2
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 2.3e-178 629.4 445 71.0
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 3.1e-178 629.0 495 65.3
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 5.2e-178 628.2 454 70.5
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.9e-178 627.5 495 65.7
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.2e-177 627.1 434 72.4
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.2e-177 627.1 434 72.4
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 1.2e-177 627.1 496 67.5
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 4.4e-177 625.2 445 71.2
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 9.8e-177 624.0 445 71.9
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 1.7e-176 623.2 431 70.5
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.1e-175 618.6 421 72.2
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 7.1e-175 617.8 438 69.4
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 7.1e-175 617.8 439 69.5
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 7.1e-175 617.8 512 63.5
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 6.0e-174 614.8 427 71.4
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 1.5e-172 610.1 439 68.8
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 1.9e-172 609.8 429 69.7
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 3.6e-171 605.5 441 67.6
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 2.3e-170 602.8 457 65.0
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 3.4e-169 599.0 467 64.0
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 2.9e-168 595.9 485 64.5
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 2.4e-167 592.8 479 61.0
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 4.1e-167 592.0 476 64.1
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 1.6e-163 580.1 434 65.2
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 2.0e-161 573.2 443 63.4
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 2.9e-160 569.3 468 59.6
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 4.9e-160 568.5 472 64.8
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 6.0e-158 561.6 495 60.2
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 1.7e-149 533.5 445 59.3
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 4.5e-145 518.8 373 68.1
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 6.4e-144 515.0 311 81.0
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 6.2e-139 498.4 431 61.5
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 4.5e-137 492.3 434 57.4
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 7.1e-135 485.0 431 59.9
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 6.7e-133 478.4 532 48.1
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.7e-133 478.0 489 54.6
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 1.0e-128 464.5 481 50.5
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 3.3e-124 449.5 413 57.4
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 5.7e-108 395.6 326 63.8
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.9e-95 354.0 234 73.1
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 1.8e-82 310.8 397 47.1
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 2.0e-81 307.4 430 39.8
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 3.0e-77 293.5 226 63.3
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 4.0e-77 293.1 257 62.3
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 1.3e-75 288.1 409 45.2
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 8.9e-69 265.4 228 62.7
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 2.3e-64 250.8 331 47.7
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 4.7e-62 243.0 174 70.1
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 4.0e-61 240.0 270 44.4
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 6.4e-59 232.6 378 35.4
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 4.1e-50 203.4 385 36.6
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 3.5e-49 200.3 153 66.0
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.3e-38 165.2 180 50.6
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 1.4e-37 161.8 130 65.4
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.1e-33 147.9 96 71.9
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 6.0e-25 119.8 67 83.6
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 3.7e-22 110.5 78 65.4
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 3.1e-21 107.5 135 47.4
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 9.0e-21 105.9 57 86.0
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.2e-20 105.5 82 65.9
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 4.5e-20 103.6 69 72.5
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 2.1e-14 84.7 85 57.6
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 8.2e-14 82.8 53 69.8
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 8.2e-14 82.8 53 69.8
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 4.5e-12 77.0 62 58.1
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 5.5e-10 70.1 72 55.6


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