Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026253 Chenopodium quinoa HOM05D000228 ORTHO05D044044 1.6e-137 492.7 237 100.0
AUR62026863 Chenopodium quinoa HOM05D000228 ORTHO05D004880 1.1e-85 320.5 172 90.7
AUR62032652 Chenopodium quinoa HOM05D000228 ORTHO05D004880 5.5e-85 318.2 172 90.1
EL10Ac2g02803 Beta vulgaris HOM05D000228 ORTHO05D004880 6.5e-70 268.1 150 83.3
Ah.10g030560 Amaranthus hybridus HOM05D000228 ORTHO05D004880 1.2e-68 263.8 152 82.9
Ah.10g030570 Amaranthus hybridus HOM05D000228 ORTHO05D004880 1.2e-68 263.8 152 82.9
Sc11g0006440 Simmondsia chinensis HOM05D000228 ORTHO05D004880 4.0e-51 205.7 150 65.3
Hund27781 Selenicereus undatus HOM05D000228 ORTHO05D004880 1.5e-50 203.8 150 61.3
Dinv22035 Davidia involucrata HOM05D000228 ORTHO05D004880 1.2e-47 194.1 151 60.3
Hma1.2p1_1202F.1_g266790 Hydrangea macrophylla HOM05D000228 ORTHO05D004880 1.9e-45 186.8 151 59.6
GSVIVG01013491001 Vitis vinifera HOM05D000228 ORTHO05D004880 2.0e-39 166.8 151 55.6
ECA236G0597 Erigeron canadensis HOM05D000228 ORTHO05D004880 4.6e-39 165.6 151 55.6
Migut.B01227 Erythranthe guttata HOM05D000228 ORTHO05D004880 1.3e-38 164.1 163 54.0
HanXRQChr15g0481481 Helianthus annuus HOM05D000228 ORTHO05D004880 3.9e-38 162.5 150 54.0
Cc02_g30260 Coffea canephora HOM05D000228 ORTHO05D004880 5.0e-38 162.2 173 49.7
PGR044G0122 Punica granatum HOM05D000228 ORTHO05D004880 3.3e-37 159.5 150 51.3
Solyc01g096390.4 Solanum lycopersicum HOM05D000228 ORTHO05D004880 4.3e-37 159.1 150 53.3
Sopen01g040120 Solanum pennellii HOM05D000228 ORTHO05D004880 4.3e-37 159.1 150 53.3
SalBow5G5050 Salvia bowleyana HOM05D000228 ORTHO05D004880 5.6e-37 158.7 152 54.6
Hund27778 Selenicereus undatus HOM05D000228 ORTHO05D004880 7.3e-37 158.3 250 37.2
CAN.G1045.38 Capsicum annuum HOM05D000228 ORTHO05D004880 2.8e-36 156.4 150 52.7
Nitab4.5_0000307g0250 Nicotiana tabacum HOM05D000228 ORTHO05D004880 8.0e-36 154.8 149 52.3
CiPaw.13G013500 Carya illinoinensis HOM05D000228 ORTHO05D004880 1.8e-35 153.7 151 52.3
FAN01G1291 Fragaria x ananassa HOM05D000228 ORTHO05D004880 1.8e-35 153.7 156 51.3
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 4.0e-35 152.5 151 52.3
FvH4_7g03040 Fragaria vesca HOM05D000228 ORTHO05D004880 6.8e-35 151.8 156 50.6
FAN03G2523 Fragaria x ananassa HOM05D000228 ORTHO05D004880 6.8e-35 151.8 156 50.6
FAN10G2682 Fragaria x ananassa HOM05D000228 ORTHO05D004880 6.8e-35 151.8 156 50.6
Potri.001G027232 Populus trichocarpa HOM05D000228 ORTHO05D004880 8.9e-35 151.4 150 52.7
Actinidia21520 Actinidia chinensis HOM05D000228 ORTHO05D004880 4.4e-34 149.1 150 51.3
Prupe.2G035500 Prunus persica HOM05D000228 ORTHO05D004880 4.4e-34 149.1 157 51.0
Sabra03G0146600 Salix brachista HOM05D000228 ORTHO05D004880 4.4e-34 149.1 149 54.4
SGA_v2.0_scaffold124G33613 Striga asiatica HOM05D000228 ORTHO05D004880 4.4e-34 149.1 149 51.0
RcHm_v2.0_Chr1g0324091 Rosa chinensis HOM05D000228 ORTHO05D004880 9.8e-34 147.9 155 50.3
DCAR_022342 Daucus carota HOM05D000228 ORTHO05D004880 1.3e-33 147.5 153 49.0
BolC3t15049H Brassica oleracea HOM05D000228 ORTHO05D004880 1.7e-33 147.1 158 50.6
Potri.003G196900 Populus trichocarpa HOM05D000228 ORTHO05D004880 1.7e-33 147.1 149 53.7
BcaB01g03594 Brassica carinata HOM05D000228 ORTHO05D004880 2.9e-33 146.4 158 50.0
BcaC01g05442 Brassica carinata HOM05D000228 ORTHO05D004880 3.7e-33 146.0 158 50.0
A03p22490 Brassica napus HOM05D000228 ORTHO05D004880 3.7e-33 146.0 158 50.0
C03p26640 Brassica napus HOM05D000228 ORTHO05D004880 3.7e-33 146.0 158 50.0
BraA03t11476Z Brassica rapa HOM05D000228 ORTHO05D004880 3.7e-33 146.0 158 50.0
CSS0032728 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D004880 3.7e-33 146.0 151 51.0
Lalb_Chr03g0032731 Lupinus albus HOM05D000228 ORTHO05D004880 6.4e-33 145.2 149 46.3
Peaxi162Scf00767g00417 Petunia axillaris HOM05D000228 ORTHO05D004880 6.4e-33 145.2 150 50.7
CANSAT56G3974 Cannabis sativa HOM05D000228 ORTHO05D004880 1.1e-32 144.4 150 49.3
TWI15G0020 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 1.1e-32 144.4 151 48.3
Sp4g22340 Schrenkiella parvula HOM05D000228 ORTHO05D004880 1.4e-32 144.1 156 51.3
Eucgr.J01182 Eucalyptus grandis HOM05D000228 ORTHO05D004880 3.2e-32 142.9 151 50.3
Thhalv10016128m.g Eutrema salsugineum HOM05D000228 ORTHO05D004880 4.1e-32 142.5 158 50.0
arahy.Tifrunner.gnm1.ann1.K566NY Arachis hypogaea HOM05D000228 ORTHO05D004880 7.1e-32 141.7 149 47.7
MD02G1287600 Malus domestica HOM05D000228 ORTHO05D004880 1.2e-31 141.0 157 51.0
Lalb_Chr01g0007761 Lupinus albus HOM05D000228 ORTHO05D004880 1.6e-31 140.6 149 44.3
THA.LOC104809820 Tarenaya hassleriana HOM05D000228 ORTHO05D004880 2.1e-31 140.2 156 48.7
BcaB02g09059 Brassica carinata HOM05D000228 ORTHO05D004880 3.5e-31 139.4 151 48.3
Rhsim01G0124000 Rhododendron simsii HOM05D000228 ORTHO05D004880 4.6e-31 139.0 150 52.0
Nn6g31494 Nelumbo nucifera HOM05D000228 ORTHO05D004880 6.0e-31 138.7 152 44.1
CARHR134990 Cardamine hirsuta HOM05D000228 ORTHO05D004880 1.0e-30 137.9 158 51.3
Gorai.010G216600 Gossypium raimondii HOM05D000228 ORTHO05D004880 1.0e-30 137.9 151 47.7
TWI38G1715 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 1.0e-30 137.9 157 46.5
Ciclev10004129m.g Citrus clementina HOM05D000228 ORTHO05D004880 1.3e-30 137.5 154 50.6
Gohir.A06G175400 Gossypium hirsutum HOM05D000228 ORTHO05D004880 2.3e-30 136.7 151 47.7
Gohir.D06G185200 Gossypium hirsutum HOM05D000228 ORTHO05D004880 2.3e-30 136.7 151 47.7
AT2G40030 Arabidopsis thaliana HOM05D000228 ORTHO05D004880 3.9e-30 136.0 178 44.9
Duzib114G0608 Durio zibethinus HOM05D000228 ORTHO05D004880 5.1e-30 135.6 151 48.3
Manes.04G159600 Manihot esculenta HOM05D000228 ORTHO05D004880 5.1e-30 135.6 150 48.7
Thecc.10G157200 Theobroma cacao HOM05D000228 ORTHO05D004880 6.6e-30 135.2 151 48.3
AL4G37670 Arabidopsis lyrata HOM05D000228 ORTHO05D004880 8.6e-30 134.8 178 45.5
MD07G1039700 Malus domestica HOM05D000228 ORTHO05D004880 8.6e-30 134.8 156 49.4
Carub.0004s2219 Capsella rubella HOM05D000228 ORTHO05D004880 1.1e-29 134.4 178 44.9
MBI17_g29157_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 1.1e-29 134.4 158 46.2
Sed0021971 Sechium edule HOM05D000228 ORTHO05D004880 2.5e-29 133.3 158 50.0
unitig_0.g1386 Utricularia gibba HOM05D000228 ORTHO05D004880 3.3e-29 132.9 152 48.0
Atru.chr12.1341 Acer truncatum HOM05D000228 ORTHO05D004880 7.3e-29 131.7 151 47.7
COL.COLO4_20753 Corchorus olitorius HOM05D000228 ORTHO05D004880 2.1e-28 130.2 151 48.3
MELO3C005153.2 Cucumis melo HOM05D000228 ORTHO05D004880 2.1e-28 130.2 150 45.3
CsaV3_5G024490 Cucumis sativus L. HOM05D000228 ORTHO05D004880 2.8e-28 129.8 150 46.0
FAN06G4504 Fragaria x ananassa HOM05D000228 ORTHO05D004880 3.6e-28 129.4 156 46.8
PSO063G0693 Papaver somniferum HOM05D000228 ORTHO05D004880 6.2e-28 128.6 151 41.7
Aa31LG5G19570 Aethionema arabicum HOM05D000228 ORTHO05D004880 1.1e-27 127.9 158 46.2
PSO782G2240 Papaver somniferum HOM05D000228 ORTHO05D004880 1.4e-27 127.5 151 41.1
vmacro12694 Vaccinium macrocarpon HOM05D000228 ORTHO05D004880 8.9e-27 124.8 166 45.2
Glyma.13G196900 Glycine max HOM05D000228 ORTHO05D004880 2.0e-26 123.6 151 43.0
Aqoxy7G04198 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 3.4e-26 122.9 154 43.5
Glyma.15G235900 Glycine max HOM05D000228 ORTHO05D004880 3.4e-26 122.9 151 43.7
Lj3g0006268 Lotus japonicus HOM05D000228 ORTHO05D004880 3.4e-26 122.9 149 43.0
Sed0005526 Sechium edule HOM05D000228 ORTHO05D004880 3.4e-26 122.9 157 43.3
TPR.G25078 Trifolium pratense HOM05D000228 ORTHO05D004880 3.4e-26 122.9 149 45.6
Phvul.011G206900 Phaseolus vulgaris HOM05D000228 ORTHO05D004880 9.9e-26 121.3 151 41.1
TAR626G0081 Trochodendron aralioides HOM05D000228 ORTHO05D004880 1.7e-25 120.6 120 49.2
HanXRQChr01g0022531 Helianthus annuus HOM05D000228 ORTHO05D004880 2.9e-25 119.8 187 39.0
Medtr8g038990 Medicago truncatula HOM05D000228 ORTHO05D004880 1.4e-24 117.5 149 43.6
Haze_03043 Corylus avellana HOM05D000228 ORTHO05D004880 1.9e-24 117.1 205 36.6
Lj3g0014961 Lotus japonicus HOM05D000228 ORTHO05D004880 4.1e-24 115.9 150 41.3
Aqoxy6G01013 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 1.2e-23 114.4 156 42.9
Cpa.g.sc271.2 Carica papaya HOM05D000228 ORTHO05D004880 6.6e-22 108.6 96 50.0
HPP92_010995 Vanilla planifolia HOM05D000228 ORTHO05D004880 1.9e-21 107.1 152 38.8
Zm00001eb207920 Zea mays HOM05D000228 ORTHO05D004880 3.3e-21 106.3 154 39.6
ClCG01G007520 Citrullus lanatus HOM05D000228 ORTHO05D004880 6.2e-20 102.1 114 45.6
Nitab4.5_0004955g0050 Nicotiana tabacum HOM05D000228 ORTHO05D004880 2.4e-19 100.1 96 49.0
SalBow5G3376 Salvia bowleyana HOM05D000228 ORTHO05D004880 3.1e-19 99.8 94 52.1
arahy.Tifrunner.gnm1.ann1.50BPU8 Arachis hypogaea HOM05D000228 ORTHO05D004880 2.0e-18 97.1 95 50.5
CDE02G4035 Ceratophyllum demersum HOM05D000228 ORTHO05D004880 4.2e-16 89.4 123 35.8
Ca_23957_v3 Cicer arietinum L. HOM05D000228 ORTHO05D004880 4.6e-15 85.9 197 33.5
Ca_30885_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 4.6e-15 85.9 197 33.5
MBI05_g03760_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 7.3e-13 78.6 132 37.9
TPR.G39356 Trifolium pratense HOM05D000228 ORTHO05D044044 2.0e-10 70.5 92 41.3
VMungo1127G1028 Vigna mungo HOM05D000228 ORTHO05D004880 9.9e-10 68.2 94 38.3
Psat4g144400 Pisum sativum HOM05D000228 ORTHO05D004880 7.1e-08 62.0 53 56.6
TPR.G27818 Trifolium pratense HOM05D000228 ORTHO05D004880 1.6e-07 60.8 53 56.6
Lj7A585G29 Lonicera japonica HOM05D000228 ORTHO05D004880 2.7e-07 60.1 49 49.0
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 4.6e-07 59.3 38 73.7


User provided reference genes

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