Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018556 Chenopodium quinoa HOM05D005045 ORTHO05D006386 1.7e-205 719.2 377 100.0
AUR62020863 Chenopodium quinoa HOM05D005045 ORTHO05D006386 7.7e-190 667.2 361 96.4
EL10Ac3g07454 Beta vulgaris HOM05D005045 ORTHO05D006386 3.1e-175 618.6 375 85.6
Ah.04g149410 Amaranthus hybridus HOM05D005045 ORTHO05D006386 1.1e-159 567.0 384 78.6
Dinv38168 Davidia involucrata HOM05D005045 ORTHO05D006386 3.6e-155 552.0 375 77.1
Sed0026716 Sechium edule HOM05D005045 ORTHO05D006386 4.7e-155 551.6 375 76.3
CiPaw.01G116800 Carya illinoinensis HOM05D005045 ORTHO05D006386 6.1e-155 551.2 375 76.5
Haze_11653 Corylus avellana HOM05D005045 ORTHO05D006386 1.4e-154 550.1 375 74.9
PGR142G0016 Punica granatum HOM05D005045 ORTHO05D006386 2.3e-154 549.3 375 76.5
TWI53G1845 Tripterygium wilfordii HOM05D005045 ORTHO05D006386 2.6e-153 545.8 376 75.8
Cpa.g.sc157.48 Carica papaya HOM05D005045 ORTHO05D006386 3.4e-153 545.4 375 76.3
ClCG05G003110 Citrullus lanatus HOM05D005045 ORTHO05D006386 9.8e-153 543.9 359 78.3
MELO3C006292.2 Cucumis melo HOM05D005045 ORTHO05D006386 9.8e-153 543.9 356 78.7
Sc19g0007360 Simmondsia chinensis HOM05D005045 ORTHO05D006386 9.8e-153 543.9 375 76.0
CsaV3_3G010730 Cucumis sativus L. HOM05D005045 ORTHO05D006386 2.2e-152 542.7 356 78.4
Sp4g14350 Schrenkiella parvula HOM05D005045 ORTHO05D006386 1.8e-151 539.7 375 74.7
Oeu034322.3 Olea europaea HOM05D005045 ORTHO05D006386 5.4e-151 538.1 375 74.4
CAN.G765.38 Capsicum annuum HOM05D005045 ORTHO05D006386 7.0e-151 537.7 375 74.4
Glyma.18G002400 Glycine max HOM05D005045 ORTHO05D006386 1.2e-150 537.0 375 74.4
Cc03_g08470 Coffea canephora HOM05D005045 ORTHO05D006386 2.0e-150 536.2 376 74.2
THA.LOC104826172 Tarenaya hassleriana HOM05D005045 ORTHO05D006386 2.0e-150 536.2 375 74.9
Ciclev10004166m.g Citrus clementina HOM05D005045 ORTHO05D006386 3.5e-150 535.4 375 75.5
Thhalv10016151m.g Eutrema salsugineum HOM05D005045 ORTHO05D006386 4.6e-150 535.0 375 74.4
Potri.001G320300 Populus trichocarpa HOM05D005045 ORTHO05D006386 1.7e-149 533.1 375 75.2
CARHR125720 Cardamine hirsuta HOM05D005045 ORTHO05D006386 2.3e-149 532.7 374 73.8
Peaxi162Scf00423g00410 Petunia axillaris HOM05D005045 ORTHO05D006386 2.3e-149 532.7 356 76.7
Solyc05g053800.3 Solanum lycopersicum HOM05D005045 ORTHO05D006386 5.0e-149 531.6 375 73.9
Lalb_Chr11g0075871 Lupinus albus HOM05D005045 ORTHO05D006386 6.6e-149 531.2 375 73.3
Sopen05g032270 Solanum pennellii HOM05D005045 ORTHO05D006386 1.1e-148 530.4 375 73.6
Gohir.D02G022400 Gossypium hirsutum HOM05D005045 ORTHO05D006386 2.5e-148 529.3 375 74.9
Carub.0004s1329 Capsella rubella HOM05D005045 ORTHO05D006386 4.3e-148 528.5 375 72.8
Lj6g0005100 Lotus japonicus HOM05D005045 ORTHO05D006386 5.6e-148 528.1 375 73.9
Gorai.005G027800 Gossypium raimondii HOM05D005045 ORTHO05D006386 7.3e-148 527.7 375 74.7
Gohir.A02G019100 Gossypium hirsutum HOM05D005045 ORTHO05D006386 1.2e-147 526.9 375 74.7
Cfa014961 Carpinus fangiana HOM05D005045 ORTHO05D006386 2.1e-147 526.2 361 74.8
BcaB01g04004 Brassica carinata HOM05D005045 ORTHO05D006386 2.8e-147 525.8 375 73.1
BcaC01g05925 Brassica carinata HOM05D005045 ORTHO05D006386 2.8e-147 525.8 375 72.5
Phvul.001G266800 Phaseolus vulgaris HOM05D005045 ORTHO05D006386 3.6e-147 525.4 375 72.8
Aqoxy2G03932 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 4.7e-147 525.0 374 74.1
HPP92_024209 Vanilla planifolia HOM05D005045 ORTHO05D006386 4.7e-147 525.0 375 73.3
AL4G27320 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 6.2e-147 524.6 375 72.5
Thecc.04G195000 Theobroma cacao HOM05D005045 ORTHO05D006386 1.4e-146 523.5 375 73.6
TPR.G25379 Trifolium pratense HOM05D005045 ORTHO05D006386 1.4e-146 523.5 375 73.6
AT2G31970 Arabidopsis thaliana HOM05D005045 ORTHO05D006386 1.8e-146 523.1 375 72.3
Migut.G00767 Erythranthe guttata HOM05D005045 ORTHO05D006386 3.1e-146 522.3 375 73.1
Duzib151G0179 Durio zibethinus HOM05D005045 ORTHO05D006386 1.2e-145 520.4 375 73.9
A03p17990 Brassica napus HOM05D005045 ORTHO05D006386 2.0e-145 519.6 381 71.4
C03p21030 Brassica napus HOM05D005045 ORTHO05D006386 4.4e-145 518.5 384 70.8
BolC3t14484H Brassica oleracea HOM05D005045 ORTHO05D006386 4.4e-145 518.5 384 70.8
Medtr3g084300 Medicago truncatula HOM05D005045 ORTHO05D006386 7.5e-145 517.7 375 72.3
FvH4_4g13300 Fragaria vesca HOM05D005045 ORTHO05D006386 9.8e-145 517.3 375 72.5
Eucgr.H00025 Eucalyptus grandis HOM05D005045 ORTHO05D006386 3.7e-144 515.4 375 73.6
Psat5g100040 Pisum sativum HOM05D005045 ORTHO05D006386 3.7e-144 515.4 375 71.7
Rhsim02G0061900 Rhododendron simsii HOM05D005045 ORTHO05D006386 3.7e-144 515.4 401 68.3
RcHm_v2.0_Chr4g0413591 Rosa chinensis HOM05D005045 ORTHO05D006386 8.3e-144 514.2 375 72.3
BraA03t11060Z Brassica rapa HOM05D005045 ORTHO05D006386 1.1e-143 513.8 396 68.7
FAN22G0494 Fragaria x ananassa HOM05D005045 ORTHO05D006386 2.4e-143 512.7 375 72.3
Nn3g20083 Nelumbo nucifera HOM05D005045 ORTHO05D006386 7.0e-143 511.1 375 70.9
PSO017G0058 Papaver somniferum HOM05D005045 ORTHO05D006386 9.2e-143 510.8 350 76.0
MSTRG.9796 Avicennia marina HOM05D005045 ORTHO05D006386 1.6e-142 510.0 375 70.7
MD05G1230300 Malus domestica HOM05D005045 ORTHO05D006386 2.7e-142 509.2 375 70.7
VMungo1383G3533 Vigna mungo HOM05D005045 ORTHO05D006386 4.6e-142 508.4 361 73.4
Manes.03G144200 Manihot esculenta HOM05D005045 ORTHO05D006386 6.0e-142 508.1 375 72.3
Ca_16407_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 1.3e-141 506.9 361 73.7
Ca_16416_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 1.3e-141 506.9 361 73.7
CSS0025820 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 1.9e-140 503.1 350 74.0
HanXRQChr02g0058481 Helianthus annuus HOM05D005045 ORTHO05D006386 1.9e-140 503.1 375 70.1
Aa31LG5G5040 Aethionema arabicum HOM05D005045 ORTHO05D006386 9.5e-140 500.7 336 76.5
Prupe.1G165000 Prunus persica HOM05D005045 ORTHO05D006386 1.6e-139 500.0 375 71.7
Actinidia28996 Actinidia chinensis HOM05D005045 ORTHO05D006386 2.3e-138 496.1 379 70.4
ECA233G4939 Erigeron canadensis HOM05D005045 ORTHO05D006386 2.0e-137 493.0 375 68.5
Os02g0497500 Oryza sativa ssp. japonica HOM05D005045 ORTHO05D006386 2.0e-137 493.0 372 70.4
SalBow8G0828 Salvia bowleyana HOM05D005045 ORTHO05D006386 7.5e-137 491.1 361 71.2
DCAR_005488 Daucus carota HOM05D005045 ORTHO05D006386 1.3e-136 490.3 360 71.9
MBI07_g27365_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 4.9e-136 488.4 375 69.3
CSS0020032 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 6.4e-136 488.0 373 69.2
unitig_0.g1961 Utricularia gibba HOM05D005045 ORTHO05D006386 2.1e-134 483.0 375 68.8
ATR0561G148 Amborella trichopoda HOM05D005045 ORTHO05D006386 1.7e-133 479.9 361 69.3
Lsat_1_v5_gn_6_59140 Lactuca sativa HOM05D005045 ORTHO05D006386 1.1e-132 477.2 374 68.2
BcaNung07126 Brassica carinata HOM05D005045 ORTHO05D006386 1.9e-132 476.5 326 74.5
Sabra16G0202900 Salix brachista HOM05D005045 ORTHO05D006386 2.5e-132 476.1 430 61.9
FAN17G1875 Fragaria x ananassa HOM05D005045 ORTHO05D006386 7.3e-132 474.6 295 81.7
vmacro15566 Vaccinium macrocarpon HOM05D005045 ORTHO05D006386 3.2e-127 459.1 375 67.2
Atru.chr4.1578 Acer truncatum HOM05D005045 ORTHO05D006386 1.6e-126 456.8 266 86.5
SGA_v2.0_scaffold27G11679 Striga asiatica HOM05D005045 ORTHO05D006386 1.6e-123 446.8 375 64.8
Mapoly0027s0186 Marchantia polymorpha HOM05D005045 ORTHO05D006386 2.8e-123 446.0 374 63.4
CDE02G0777 Ceratophyllum demersum HOM05D005045 ORTHO05D006386 1.4e-122 443.7 375 65.3
FAN12G2321 Fragaria x ananassa HOM05D005045 ORTHO05D006386 1.8e-122 443.4 337 69.7
Nitab4.5_0002260g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 2.9e-120 436.0 319 71.8
Pp3c10_3760 Physcomitrium patens HOM05D005045 ORTHO05D006386 2.5e-116 422.9 355 62.0
COL.COLO4_20233 Corchorus olitorius HOM05D005045 ORTHO05D006386 3.3e-116 422.5 244 87.7
QL06p025788 Quercus lobata HOM05D005045 ORTHO05D006386 3.1e-114 416.0 264 81.8
AagrBONN_evm.TU.Sc2ySwM_368.995 Anthoceros agrestis HOM05D002013 ORTHO05D002293 4.9e-112 408.7 370 58.6
FAN07G1455 Fragaria x ananassa HOM05D005045 ORTHO05D006386 1.6e-110 403.7 312 68.6
SMO217G0009 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 1.6e-110 403.7 378 59.0
SMO356G0717 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 1.1e-106 391.0 373 57.9
Lju912A1G33 Lonicera japonica HOM05D005045 ORTHO05D006386 1.8e-101 373.6 375 55.7
AL80U10080 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 2.1e-94 350.1 187 93.6
MCO01G132 Micromonas commoda HOM05D005045 ORTHO05D006386 2.6e-81 306.6 350 48.0
CBR_g44539 Chara braunii HOM05D005045 ORTHO05D006386 3.9e-77 292.7 304 56.2
Cre03.g192550 Chlamydomonas reinhardtii HOM05D005045 ORTHO05D006386 8.8e-77 291.6 367 46.0
PRCOL_00000463 Prasinoderma coloniale HOM05D005045 ORTHO05D006386 2.4e-58 230.3 341 42.5
Nitab4.5_0003358g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 1.9e-55 220.7 203 59.1
Cfa022909 Carpinus fangiana HOM05D005045 ORTHO05D006386 1.4e-53 214.5 329 41.3
Nitab4.5_0003358g0090 Nicotiana tabacum HOM05D005045 ORTHO05D006386 4.0e-53 213.0 140 80.0
Actinidia11455 Actinidia chinensis HOM05D005045 ORTHO05D006386 9.1e-50 201.8 139 77.7
Lj6A381G12 Lonicera japonica HOM05D005045 ORTHO05D006386 4.7e-38 162.9 192 47.9
SHI26076 Sapria himalayana HOM05D005045 ORTHO05D006386 8.9e-37 158.7 87 92.0
Actinidia11457 Actinidia chinensis HOM05D005045 ORTHO05D006386 2.4e-34 150.6 106 74.5
Lsat_1_v5_gn_2_13081 Lactuca sativa HOM05D005045 ORTHO05D006386 2.3e-21 107.5 64 82.8
Lsat_1_v5_gn_5_127521 Lactuca sativa HOM05D005045 ORTHO05D006386 2.0e-20 104.4 106 56.6
Lsat_1_v5_gn_3_72140 Lactuca sativa HOM05D005045 ORTHO05D006386 3.4e-20 103.6 64 76.6
SHI26072 Sapria himalayana HOM05D005045 ORTHO05D006386 5.1e-16 89.7 144 39.6
Lsat_1_v5_gn_6_56800 Lactuca sativa HOM05D000112 ORTHO05D001918 1.4e-13 81.6 53 73.6
Zm00001eb181120 Zea mays HOM05D005045 ORTHO05D006386 4.0e-13 80.1 115 46.1
ECA233G3942 Erigeron canadensis HOM05D005045 ORTHO05D006386 1.9e-10 71.2 167 35.9
Lsat_1_v5_gn_8_35100 Lactuca sativa HOM05D000324 ORTHO05D010724 5.4e-10 69.7 63 63.5
Lsat_1_v5_gn_4_149801 Lactuca sativa HOM05D000324 ORTHO05D010724 1.0e-08 65.5 61 63.9
Lsat_1_v5_gn_9_35481 Lactuca sativa HOM05D000324 ORTHO05D010724 1.7e-08 64.7 56 67.9
Lsat_1_v5_gn_1_5060 Lactuca sativa HOM05D001876 ORTHO05D002002 2.5e-07 60.8 33 90.9


User provided reference genes

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