Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014946 Chenopodium quinoa HOM05D005508 ORTHO05D006882 2.6e-115 418.7 208 100.0
EL10Ac2g03136 Beta vulgaris HOM05D005508 ORTHO05D006882 5.4e-52 208.4 240 51.7
AUR62014947 Chenopodium quinoa HOM05D005508 ORTHO05D006882 4.1e-44 182.2 203 55.7
AUR62029195 Chenopodium quinoa HOM05D005508 ORTHO05D006882 5.4e-44 181.8 201 56.2
Hund05300 Selenicereus undatus HOM05D005508 ORTHO05D006882 1.1e-36 157.5 208 45.2
QL10p049508 Quercus lobata HOM05D005508 ORTHO05D006882 1.2e-32 144.1 225 40.9
Dinv34945 Davidia involucrata HOM05D005508 ORTHO05D006882 2.8e-32 142.9 225 39.1
PSO017G4331 Papaver somniferum HOM05D005508 ORTHO05D006882 6.2e-32 141.7 233 40.3
DCAR_011042 Daucus carota HOM05D005508 ORTHO05D006882 1.4e-31 140.6 225 38.7
PSO478G0705 Papaver somniferum HOM05D005508 ORTHO05D006882 3.1e-31 139.4 233 39.9
MD09G1066100 Malus domestica HOM05D005508 ORTHO05D006882 2.0e-30 136.7 212 41.0
Gohir.A09G009900 Gossypium hirsutum HOM05D005508 ORTHO05D006882 1.3e-29 134.0 223 38.1
Gohir.D09G009000 Gossypium hirsutum HOM05D005508 ORTHO05D006882 4.9e-29 132.1 223 38.1
Gorai.006G010700 Gossypium raimondii HOM05D005508 ORTHO05D006882 4.9e-29 132.1 223 38.1
TAR371G0059 Trochodendron aralioides HOM05D005508 ORTHO05D006882 6.4e-29 131.7 234 37.6
Prupe.3G255400 Prunus persica HOM05D005508 ORTHO05D006882 1.4e-28 130.6 225 37.8
Sc10g0004650 Simmondsia chinensis HOM05D005508 ORTHO05D006882 1.4e-28 130.6 213 38.5
Sabra04G0069200 Salix brachista HOM05D005508 ORTHO05D006882 3.2e-28 129.4 242 38.0
Ah.10g032240 Amaranthus hybridus HOM05D005508 ORTHO05D006882 4.2e-28 129.0 264 37.9
Sabra17G0082300 Salix brachista HOM05D005508 ORTHO05D006882 4.2e-28 129.0 235 37.0
Thecc.04G094900 Theobroma cacao HOM05D005508 ORTHO05D006882 4.2e-28 129.0 225 38.2
COL.COLO4_07024 Corchorus olitorius HOM05D005508 ORTHO05D006882 7.1e-28 128.3 225 38.2
GSVIVG01032921001 Vitis vinifera HOM05D005508 ORTHO05D006882 7.1e-28 128.3 226 38.1
CANSAT64G1484 Cannabis sativa HOM05D005508 ORTHO05D006882 9.2e-28 127.9 226 37.6
Nn4g23404 Nelumbo nucifera HOM05D005508 ORTHO05D006882 9.2e-28 127.9 223 36.3
Lj4A336G6 Lonicera japonica HOM05D005508 ORTHO05D006882 2.1e-27 126.7 228 37.7
RcHm_v2.0_Chr2g0165901 Rosa chinensis HOM05D005508 ORTHO05D006882 3.5e-27 125.9 236 41.1
AT5G15550 Arabidopsis thaliana HOM05D005508 ORTHO05D006882 4.6e-27 125.6 235 34.0
Aqoxy3G02922 Aquilegia oxysepala HOM05D005508 ORTHO05D006882 1.0e-26 124.4 234 36.8
MSTRG.3354 Avicennia marina HOM05D005508 ORTHO05D006882 1.0e-26 124.4 234 36.3
Potri.017G093300 Populus trichocarpa HOM05D005508 ORTHO05D006882 1.0e-26 124.4 232 35.3
Manes.02G054600 Manihot esculenta HOM05D005508 ORTHO05D006882 1.3e-26 124.0 234 34.6
SGA_v2.0_scaffold148G36399 Striga asiatica HOM05D005508 ORTHO05D006882 1.3e-26 124.0 230 34.8
CAN.G588.15 Capsicum annuum HOM05D005508 ORTHO05D006882 2.3e-26 123.2 225 36.4
Glyma.19G029400 Glycine max HOM05D005508 ORTHO05D006882 3.0e-26 122.9 225 38.2
AL6G26410 Arabidopsis lyrata HOM05D005508 ORTHO05D006882 5.1e-26 122.1 235 33.6
Carub.0006s1373 Capsella rubella HOM05D005508 ORTHO05D006882 5.1e-26 122.1 235 33.2
Ciclev10011739m.g Citrus clementina HOM05D005508 ORTHO05D006882 5.1e-26 122.1 231 35.9
CiPaw.04G056000 Carya illinoinensis HOM05D005508 ORTHO05D006882 6.6e-26 121.7 221 37.1
Rhsim10G0042800 Rhododendron simsii HOM05D005508 ORTHO05D006882 6.6e-26 121.7 226 35.0
FvH4_6g46921 Fragaria vesca HOM05D005508 ORTHO05D006882 8.7e-26 121.3 236 40.3
FAN14G5804 Fragaria x ananassa HOM05D005508 ORTHO05D010430 8.7e-26 121.3 236 40.3
CARHR197750 Cardamine hirsuta HOM05D005508 ORTHO05D006882 1.1e-25 120.9 235 34.0
Glyma.05G027800 Glycine max HOM05D005508 ORTHO05D006882 1.1e-25 120.9 225 36.4
PGSC0003DMG400001639 Solanum tuberosum HOM05D005508 ORTHO05D006882 1.5e-25 120.6 234 34.6
FAN02G1587 Fragaria x ananassa HOM05D005508 ORTHO05D010430 1.9e-25 120.2 236 40.3
Solyc02g088780.4 Solanum lycopersicum HOM05D005508 ORTHO05D006882 1.9e-25 120.2 243 32.5
Haze_14435 Corylus avellana HOM05D005508 ORTHO05D006882 2.5e-25 119.8 224 38.4
Lsat_1_v5_gn_5_138080 Lactuca sativa HOM05D005508 ORTHO05D006882 3.3e-25 119.4 203 38.4
Cc07_g04170 Coffea canephora HOM05D005508 ORTHO05D006882 5.6e-25 118.6 243 35.4
Glyma.13G056900 Glycine max HOM05D005508 ORTHO05D006882 5.6e-25 118.6 225 36.9
Cpa.g.sc14.169 Carica papaya HOM05D005508 ORTHO05D006882 7.3e-25 118.2 234 35.0
Glyma.01G086000 Glycine max HOM05D005508 ORTHO05D006882 7.3e-25 118.2 225 36.9
Psat1g067800 Pisum sativum HOM05D005508 ORTHO05D006882 7.3e-25 118.2 234 35.0
ATR0626G324 Amborella trichopoda HOM05D005508 ORTHO05D006882 1.6e-24 117.1 215 36.3
Sed0021649 Sechium edule HOM05D005508 ORTHO05D006882 1.6e-24 117.1 226 32.7
THA.LOC104820997 Tarenaya hassleriana HOM05D005508 ORTHO05D006882 2.1e-24 116.7 226 34.1
Nitab4.5_0003841g0090 Nicotiana tabacum HOM05D005508 ORTHO05D006882 2.8e-24 116.3 235 33.2
VMungo0464G0521 Vigna mungo HOM05D005508 ORTHO05D006882 2.8e-24 116.3 225 35.6
Dinv33825 Davidia involucrata HOM05D005508 ORTHO05D006882 3.6e-24 115.9 226 33.6
Duzib187G1075 Durio zibethinus HOM05D005508 ORTHO05D006882 3.6e-24 115.9 150 42.7
Nitab4.5_0017643g0010 Nicotiana tabacum HOM05D005508 ORTHO05D006882 4.7e-24 115.5 235 33.2
Oeu007065.1 Olea europaea HOM05D005508 ORTHO05D006882 4.7e-24 115.5 225 38.7
Lsat_1_v5_gn_4_172421 Lactuca sativa HOM05D005508 ORTHO05D006882 6.2e-24 115.2 222 35.6
Medtr7g099170 Medicago truncatula HOM05D005508 ORTHO05D006882 6.2e-24 115.2 234 33.8
CDE02G3404 Ceratophyllum demersum HOM05D005508 ORTHO05D006882 8.1e-24 114.8 226 36.3
Sopen01g053090 Solanum pennellii HOM05D005508 ORTHO05D006882 8.1e-24 114.8 234 32.9
Atru.chr8.461 Acer truncatum HOM05D005508 ORTHO05D006882 1.1e-23 114.4 248 33.9
Ca_04302_v3 Cicer arietinum L. HOM05D005508 ORTHO05D006882 1.1e-23 114.4 235 34.0
Lj2g0000039 Lotus japonicus HOM05D005508 ORTHO05D006882 1.1e-23 114.4 225 34.7
Peaxi162Scf00166g00526 Petunia axillaris HOM05D005508 ORTHO05D006882 1.1e-23 114.4 234 32.1
TWI32G0965 Tripterygium wilfordii HOM05D005508 ORTHO05D006882 1.1e-23 114.4 229 36.2
Phvul.004G035400 Phaseolus vulgaris HOM05D005508 ORTHO05D006882 1.4e-23 114.0 225 34.7
PGSC0003DMG400001452 Solanum tuberosum HOM05D005508 ORTHO05D006882 1.4e-23 114.0 234 33.3
Thhalv10013619m.g Eutrema salsugineum HOM05D005508 ORTHO05D006882 6.9e-23 111.7 232 32.8
TPR.G10015 Trifolium pratense HOM05D005508 ORTHO05D006882 6.9e-23 111.7 234 32.9
CsaV3_4G011930 Cucumis sativus L. HOM05D005508 ORTHO05D006882 9.0e-23 111.3 234 32.5
Lj4C332G1 Lonicera japonica HOM05D005508 ORTHO05D006882 9.0e-23 111.3 140 42.9
Sopen02g033500 Solanum pennellii HOM05D005508 ORTHO05D006882 1.5e-22 110.5 234 33.3
Aa31LG3G15780 Aethionema arabicum HOM05D005508 ORTHO05D006882 3.4e-22 109.4 211 36.0
PGR083G1795 Punica granatum HOM05D005508 ORTHO05D006882 3.4e-22 109.4 225 34.7
arahy.Tifrunner.gnm1.ann1.6ZV37H Arachis hypogaea HOM05D005508 ORTHO05D006882 4.4e-22 109.0 225 36.4
MELO3C008857.2 Cucumis melo HOM05D005508 ORTHO05D006882 4.4e-22 109.0 226 32.3
C02p07790 Brassica napus HOM05D005508 ORTHO05D006882 7.6e-22 108.2 243 32.1
Migut.K01277 Erythranthe guttata HOM05D005508 ORTHO05D006882 1.3e-21 107.5 231 32.5
Sp6g28530 Schrenkiella parvula HOM05D005508 ORTHO05D006882 1.3e-21 107.5 236 33.9
arahy.Tifrunner.gnm1.ann1.LP06NS Arachis hypogaea HOM05D005508 ORTHO05D006882 1.7e-21 107.1 225 36.0
vmacro05630 Vaccinium macrocarpon HOM05D005508 ORTHO05D006882 1.7e-21 107.1 281 31.0
unitig_747.g21846 Utricularia gibba HOM05D005508 ORTHO05D006882 2.2e-21 106.7 223 33.6
BcaC03g18558 Brassica carinata HOM05D005508 ORTHO05D006882 3.8e-21 105.9 231 32.9
CSS0005994 Camellia sinensis var. sinensis HOM05D005508 ORTHO05D006882 3.8e-21 105.9 226 33.6
ECA232G0694 Erigeron canadensis HOM05D005508 ORTHO05D006882 3.8e-21 105.9 226 34.1
SalBow5G5336 Salvia bowleyana HOM05D005508 ORTHO05D006882 3.8e-21 105.9 222 33.8
Lalb_Chr02g0158951 Lupinus albus HOM05D005508 ORTHO05D006882 6.4e-21 105.1 227 34.4
Eucgr.I02026 Eucalyptus grandis HOM05D005508 ORTHO05D006882 1.9e-20 103.6 234 32.9
SHI01216 Sapria himalayana HOM05D005508 ORTHO05D006882 1.9e-20 103.6 203 35.5
Solyc01g111030.2 Solanum lycopersicum HOM05D005508 ORTHO05D006882 2.4e-20 103.2 244 31.1
SalBow1G3414 Salvia bowleyana HOM05D005508 ORTHO05D006882 3.2e-20 102.8 217 33.6
BcaB01g05044 Brassica carinata HOM05D005508 ORTHO05D006882 1.6e-19 100.5 223 32.7
ClCG10G002410 Citrullus lanatus HOM05D005508 ORTHO05D006882 1.6e-19 100.5 242 30.2
HanXRQChr17g0551711 Helianthus annuus HOM05D005508 ORTHO05D006882 2.1e-19 100.1 229 34.1
Cfa007659 Carpinus fangiana HOM05D005508 ORTHO05D006882 4.6e-19 99.0 139 43.9
Os07g0600400 Oryza sativa ssp. japonica HOM05D005508 ORTHO05D006882 6.0e-19 98.6 237 32.5
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 9.6e-17 91.3 236 30.5
SalBow1G5707 Salvia bowleyana HOM05D005508 ORTHO05D006882 3.6e-16 89.4 216 31.5
SEGI_38227 Sequoiadendron giganteum HOM05D005508 ORTHO05D006882 1.1e-15 87.8 230 31.3
Cfa007661 Carpinus fangiana HOM05D005508 ORTHO05D006882 5.3e-15 85.5 136 40.4
FAN05G2519 Fragaria x ananassa HOM05D005508 ORTHO05D010430 9.9e-14 81.3 229 34.5
HPP92_025853 Vanilla planifolia HOM05D005508 ORTHO05D006882 2.9e-13 79.7 124 40.3
MD17G1058800 Malus domestica HOM05D005508 ORTHO05D006882 6.4e-13 78.6 296 27.7
Mapoly0212s0005 Marchantia polymorpha HOM05D005508 ORTHO05D006882 1.1e-12 77.8 238 28.2
Pp3c23_13260 Physcomitrium patens HOM05D005508 ORTHO05D006882 2.4e-12 76.6 230 27.0
SMO172G0157 Selaginella moellendorffii HOM05D005508 ORTHO05D006882 4.6e-11 72.4 226 26.5
TAR622G1292 Trochodendron aralioides HOM05D005508 ORTHO05D006882 7.9e-11 71.6 163 31.9
TPR.G17852 Trifolium pratense HOM05D005508 ORTHO05D006882 1.5e-09 67.4 94 37.2
Lj2g0016184 Lotus japonicus HOM05D005508 ORTHO05D006882 2.1e-08 63.5 201 28.9
AagrBONN_evm.TU.Sc2ySwM_228.2684 Anthoceros agrestis HOM05D005508 ORTHO05D006882 3.1e-07 59.7 227 26.0


User provided reference genes

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