Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 3.1e-176 621.7 318 100.0
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 3.7e-145 518.5 318 83.6
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 4.6e-127 458.4 247 97.2
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 8.1e-124 447.6 320 75.3
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 2.9e-113 412.5 275 76.4
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 1.6e-111 406.8 306 69.6
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 2.7e-111 406.0 288 73.6
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 6.0e-111 404.8 321 68.8
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 3.9e-110 402.1 321 68.5
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 5.1e-110 401.7 322 68.6
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 2.5e-109 399.4 332 64.2
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 7.3e-109 397.9 318 67.6
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 7.3e-109 397.9 263 78.7
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 9.6e-109 397.5 321 67.0
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 9.6e-109 397.5 287 70.4
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 1.2e-108 397.1 320 67.8
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 1.2e-108 397.1 273 75.5
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 1.6e-108 396.7 271 74.9
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.6e-108 396.7 275 74.9
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 3.6e-108 395.6 271 74.5
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 6.2e-108 394.8 320 67.5
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 6.2e-108 394.8 318 67.6
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.1e-107 394.0 323 68.1
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 1.4e-107 393.7 296 70.3
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 2.4e-107 392.9 320 66.9
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.5e-106 390.2 295 70.5
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 1.5e-106 390.2 271 74.9
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 3.4e-106 389.0 283 68.9
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 4.4e-106 388.7 321 65.4
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 5.8e-106 388.3 294 70.1
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 5.8e-106 388.3 276 71.4
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 7.6e-106 387.9 282 72.0
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 9.9e-106 387.5 276 73.6
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 2.9e-105 386.0 272 73.2
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 4.9e-105 385.2 260 76.2
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 6.4e-105 384.8 301 69.8
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 2.4e-104 382.9 271 74.9
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 7.1e-104 381.3 276 72.1
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 7.1e-104 381.3 323 64.4
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 1.6e-103 380.2 321 65.4
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 6.0e-103 378.3 249 77.5
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 6.0e-103 378.3 297 69.0
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 1.0e-102 377.5 272 71.7
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 8.7e-102 374.4 289 69.6
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 1.1e-101 374.0 273 68.9
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 1.1e-101 374.0 278 70.9
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 1.5e-101 373.6 295 67.5
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.9e-101 373.2 280 70.4
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 2.5e-101 372.9 311 65.3
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 5.6e-101 371.7 249 76.7
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 9.6e-101 370.9 295 67.5
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 2.1e-100 369.8 269 71.7
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 2.8e-100 369.4 275 68.7
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 8.1e-100 367.9 279 68.5
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 1.1e-99 367.5 274 69.7
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 1.4e-99 367.1 288 67.0
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 3.1e-99 365.9 282 67.4
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 5.3e-99 365.2 298 64.8
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 1.5e-98 363.6 258 70.2
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 2.0e-98 363.2 321 63.2
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 3.4e-98 362.5 276 67.4
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 4.5e-98 362.1 272 70.2
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 5.8e-98 361.7 272 70.2
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 5.8e-98 361.7 309 63.4
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 7.6e-98 361.3 287 66.2
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 7.6e-98 361.3 305 62.3
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 9.9e-98 360.9 416 53.1
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 1.3e-97 360.5 259 70.7
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 3.8e-97 359.0 271 67.9
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 3.8e-97 359.0 299 65.9
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 8.4e-97 357.8 276 67.4
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 1.9e-96 356.7 296 63.9
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 2.4e-96 356.3 301 64.5
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 5.4e-96 355.1 262 69.1
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 1.0e-94 350.9 234 76.1
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 8.7e-94 347.8 307 61.9
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 5.6e-93 345.1 250 70.4
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 7.4e-93 344.7 278 65.5
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 2.1e-92 343.2 278 65.1
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 2.1e-92 343.2 258 69.4
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 3.7e-92 342.4 273 66.7
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 6.2e-92 341.7 311 61.4
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 1.8e-91 340.1 260 69.2
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 2.4e-91 339.7 228 78.1
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 5.3e-91 338.6 272 65.1
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 1.2e-90 337.4 258 65.9
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 2.0e-90 336.7 253 68.8
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 3.4e-90 335.9 228 73.2
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 3.4e-90 335.9 269 66.5
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 7.6e-90 334.7 256 66.8
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 2.9e-89 332.8 317 59.6
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 6.4e-89 331.6 232 72.8
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 1.4e-88 330.5 258 67.1
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 3.2e-88 329.3 225 73.8
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 2.7e-87 326.2 259 66.8
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 1.9e-85 320.1 185 85.9
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 3.1e-83 312.8 249 65.5
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 4.5e-82 308.9 228 71.9
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 2.9e-81 306.2 296 59.5
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 1.6e-76 290.4 260 61.5
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 2.4e-75 286.6 239 64.9
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 3.4e-74 282.7 185 77.3
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 4.3e-69 265.8 271 50.9
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 6.3e-68 261.9 285 55.8
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 5.3e-67 258.8 260 58.1
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 1.3e-65 254.2 186 69.9
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 1.9e-64 250.4 167 74.9
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 1.4e-59 234.2 253 48.6
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 1.8e-59 233.8 165 71.5
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 1.7e-57 227.3 251 50.6
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 3.6e-55 219.5 251 49.4
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 2.2e-44 183.7 193 51.3
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 3.5e-42 176.4 173 50.9
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 4.5e-42 176.0 136 67.6
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 1.0e-41 174.9 128 65.6
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 4.0e-38 162.9 125 64.0
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.9e-33 146.7 78 96.2
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 6.8e-30 135.6 98 68.4
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 1.3e-28 131.3 97 69.1
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 6.3e-28 129.0 200 44.5
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 1.6e-26 124.4 120 56.7
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 4.7e-23 112.8 230 36.1
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 7.5e-21 105.5 107 58.9
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 4.6e-18 96.3 68 63.2
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 2.2e-12 77.4 71 60.6
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 5.4e-11 72.8 106 48.1
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 1.3e-09 68.2 65 61.5
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 1.1e-08 65.1 35 68.6
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 2.8e-07 60.5 65 53.8
Lj9C654T3 Lonicera japonica HOM05D006016 ORTHO05D007553 2.8e-07 60.5 46 71.7
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 1.1e-06 58.5 55 61.8


User provided reference genes

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