Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.0e-48 194.9 101 100.0
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 3.0e-32 141.7 88 83.0
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 8.7e-32 140.2 88 83.0
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 1.1e-31 139.8 89 78.7
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.9e-31 139.0 81 86.4
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 2.5e-31 138.7 96 74.0
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 5.7e-31 137.5 82 82.9
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 5.7e-31 137.5 82 82.9
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 7.4e-31 137.1 80 86.2
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 1.3e-30 136.3 83 81.9
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 1.3e-30 136.3 84 83.3
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.6e-30 136.0 95 73.7
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 1.6e-30 136.0 79 87.3
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 1.6e-30 136.0 85 81.2
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 2.2e-30 135.6 79 86.1
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 3.7e-30 134.8 81 84.0
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 3.7e-30 134.8 79 86.1
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 4.8e-30 134.4 79 86.1
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 4.8e-30 134.4 79 86.1
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 4.8e-30 134.4 82 84.1
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 4.8e-30 134.4 79 84.8
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 6.3e-30 134.0 100 70.0
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 6.3e-30 134.0 82 84.1
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 6.3e-30 134.0 79 84.8
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 6.3e-30 134.0 79 83.5
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 8.2e-30 133.7 79 84.8
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 1.1e-29 133.3 79 83.5
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 1.1e-29 133.3 96 69.8
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 1.1e-29 133.3 79 86.1
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 1.1e-29 133.3 79 83.5
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.4e-29 132.9 83 80.7
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 1.4e-29 132.9 79 84.8
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 1.8e-29 132.5 81 82.7
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 1.8e-29 132.5 85 78.8
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 1.8e-29 132.5 89 76.4
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 2.4e-29 132.1 79 84.8
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 3.1e-29 131.7 79 82.3
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 3.1e-29 131.7 79 83.5
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 3.1e-29 131.7 79 83.5
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 3.1e-29 131.7 80 82.5
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 3.1e-29 131.7 79 83.5
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 3.1e-29 131.7 79 83.5
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 3.1e-29 131.7 75 86.7
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 4.1e-29 131.3 79 83.5
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 4.1e-29 131.3 79 79.7
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 5.3e-29 131.0 79 83.5
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 6.9e-29 130.6 79 83.5
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 6.9e-29 130.6 79 83.5
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 6.9e-29 130.6 85 77.6
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 9.0e-29 130.2 83 78.3
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 9.0e-29 130.2 79 82.3
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 1.2e-28 129.8 79 82.3
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 1.2e-28 129.8 79 82.3
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 1.2e-28 129.8 79 82.3
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 1.2e-28 129.8 79 82.3
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.2e-28 129.8 79 83.5
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.2e-28 129.8 79 82.3
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 1.5e-28 129.4 79 84.8
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 2.0e-28 129.0 79 82.3
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 2.6e-28 128.6 80 82.5
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 2.6e-28 128.6 79 83.5
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 2.6e-28 128.6 86 75.6
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 3.4e-28 128.3 80 81.2
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 5.9e-28 127.5 82 78.0
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 5.9e-28 127.5 79 79.7
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 5.9e-28 127.5 89 73.0
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 7.7e-28 127.1 80 81.2
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 1.0e-27 126.7 82 80.5
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 1.3e-27 126.3 82 80.5
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.3e-27 126.3 79 84.8
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 1.7e-27 125.9 79 83.5
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 1.7e-27 125.9 79 79.7
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 1.7e-27 125.9 82 79.3
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.2e-27 125.6 80 78.8
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 2.9e-27 125.2 75 81.3
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 2.9e-27 125.2 82 78.0
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 3.8e-27 124.8 79 79.7
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 3.8e-27 124.8 79 79.7
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 5.0e-27 124.4 80 82.5
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 5.0e-27 124.4 80 82.5
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 5.0e-27 124.4 79 79.7
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 5.0e-27 124.4 82 76.8
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 6.5e-27 124.0 79 78.5
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 6.5e-27 124.0 79 77.2
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 6.5e-27 124.0 90 75.6
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 6.5e-27 124.0 79 79.7
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 8.5e-27 123.6 75 84.0
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 8.5e-27 123.6 79 78.5
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 8.5e-27 123.6 82 76.8
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 8.5e-27 123.6 82 76.8
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.1e-26 123.2 82 76.8
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 3.2e-26 121.7 97 67.0
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 7.2e-26 120.6 81 71.6
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 9.4e-26 120.2 79 74.7
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 9.4e-26 120.2 79 70.9
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 2.1e-25 119.0 79 74.7
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 3.6e-25 118.2 79 73.4
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 7.9e-25 117.1 101 64.4
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 1.8e-24 115.9 79 73.4
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 3.0e-24 115.2 77 75.3
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 3.3e-23 111.7 79 72.2
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 6.3e-22 107.5 79 69.6
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 5.3e-21 104.4 63 81.0
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 9.1e-21 103.6 132 47.7
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 9.4e-18 93.6 100 49.0
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.7e-11 72.8 70 60.0
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 6.5e-11 70.9 44 79.5
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 2.7e-09 65.5 39 79.5
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 3.6e-09 65.1 47 70.2
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 2.0e-07 59.3 30 86.7


User provided reference genes

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