Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1132G004 Amborella trichopoda HOM05D004229 ORTHO05D005468 0.0e+00 1120.9 597 100.0
TAR633G0060 Trochodendron aralioides HOM05D004229 ORTHO05D005468 1.0e-260 903.3 597 75.7
Glyma.10G208100 Glycine max HOM05D004229 ORTHO05D005468 8.5e-260 900.2 594 74.7
GSVIVG01016224001 Vitis vinifera HOM05D004229 ORTHO05D005468 4.2e-259 897.9 595 75.3
CSS0012456 Camellia sinensis var. sinensis HOM05D004229 ORTHO05D005468 7.2e-259 897.1 594 74.7
Actinidia34806 Actinidia chinensis HOM05D004229 ORTHO05D005468 1.2e-258 896.3 594 74.7
Prupe.2G209100 Prunus persica HOM05D004229 ORTHO05D005468 2.7e-258 895.2 593 75.4
VMungo1080G0141 Vigna mungo HOM05D004229 ORTHO05D005468 4.0e-257 891.3 594 73.9
Medtr1g094200 Medicago truncatula HOM05D004229 ORTHO05D005468 6.8e-257 890.6 594 73.1
Phvul.005G180400 Phaseolus vulgaris HOM05D004229 ORTHO05D005468 6.8e-257 890.6 594 74.6
PGR142G2592 Punica granatum HOM05D004229 ORTHO05D005468 4.4e-256 887.9 596 74.8
Actinidia38868 Actinidia chinensis HOM05D004229 ORTHO05D005468 5.7e-256 887.5 594 73.9
Ca_10545_v3 Cicer arietinum L. HOM05D004229 ORTHO05D005468 1.7e-255 885.9 594 73.4
Eucgr.G02865 Eucalyptus grandis HOM05D004229 ORTHO05D005468 2.2e-255 885.6 596 74.8
CANSAT56G0520 Cannabis sativa HOM05D004229 ORTHO05D005468 3.7e-255 884.8 595 74.1
Solyc05g055600.4 Solanum lycopersicum HOM05D004229 ORTHO05D005468 1.1e-254 883.2 595 73.9
Sopen05g034050 Solanum pennellii HOM05D004229 ORTHO05D005468 1.1e-254 883.2 595 73.9
vmacro07123 Vaccinium macrocarpon HOM05D004229 ORTHO05D005468 3.1e-254 881.7 601 73.4
RcHm_v2.0_Chr1g0362641 Rosa chinensis HOM05D004229 ORTHO05D005468 1.2e-253 879.8 593 74.2
Psat6g180120 Pisum sativum HOM05D004229 ORTHO05D005468 6.5e-252 874.0 594 72.4
Thecc.10G082900 Theobroma cacao HOM05D004229 ORTHO05D005468 8.5e-252 873.6 593 72.7
Gohir.D04G004600 Gossypium hirsutum HOM05D004229 ORTHO05D005468 1.1e-251 873.2 594 72.4
Gohir.A05G411400 Gossypium hirsutum HOM05D004229 ORTHO05D005468 1.5e-251 872.8 594 72.4
FvH4_7g18830 Fragaria vesca HOM05D004229 ORTHO05D005468 7.2e-251 870.5 593 73.2
Manes.15G095600 Manihot esculenta HOM05D004229 ORTHO05D005468 2.1e-250 869.0 595 72.4
MD01G1103400 Malus domestica HOM05D004229 ORTHO05D005468 8.8e-249 863.6 594 73.1
Rhsim03G0230200 Rhododendron simsii HOM05D004229 ORTHO05D005468 1.2e-248 863.2 631 69.1
ClCG05G021220 Citrullus lanatus HOM05D004229 ORTHO05D005468 2.0e-248 862.4 594 71.5
Sc20g0001740 Simmondsia chinensis HOM05D004229 ORTHO05D005468 9.8e-248 860.1 594 71.4
CDE09G0908 Ceratophyllum demersum HOM05D004229 ORTHO05D005468 1.7e-247 859.4 595 70.6
Lj5g0013282 Lotus japonicus HOM05D004229 ORTHO05D005468 3.7e-247 858.2 581 73.0
QL08p054613 Quercus lobata HOM05D004229 ORTHO05D005468 4.9e-247 857.8 634 69.9
PSO801G0085 Papaver somniferum HOM05D004229 ORTHO05D005468 6.3e-247 857.4 596 71.0
MELO3C012405.2 Cucumis melo HOM05D004229 ORTHO05D005468 3.1e-246 855.1 594 71.2
HanXRQChr09g0248221 Helianthus annuus HOM05D004229 ORTHO05D005468 3.1e-246 855.1 595 70.6
Oeu000792.2 Olea europaea HOM05D004229 ORTHO05D005468 5.4e-246 854.4 647 67.2
CAN.G694.36 Capsicum annuum HOM05D004229 ORTHO05D005468 7.0e-246 854.0 603 71.3
PSO339G0163 Papaver somniferum HOM05D004229 ORTHO05D005468 7.0e-246 854.0 595 70.8
CsaV3_5G036050 Cucumis sativus L. HOM05D004229 ORTHO05D005468 1.2e-245 853.2 594 71.0
HanXRQChr12g0376891 Helianthus annuus HOM05D004229 ORTHO05D005468 2.7e-245 852.0 595 70.6
Sed0026489 Sechium edule HOM05D004229 ORTHO05D005468 2.7e-245 852.0 594 71.2
Aqoxy4G03296 Aquilegia oxysepala HOM05D004229 ORTHO05D005468 1.0e-244 850.1 598 71.9
Potri.008G035600 Populus trichocarpa HOM05D004229 ORTHO05D005468 3.8e-244 848.2 594 70.5
Dinv31228 Davidia involucrata HOM05D004229 ORTHO05D005468 5.0e-244 847.8 557 75.9
FAN10G0146 Fragaria x ananassa HOM05D004229 ORTHO05D005468 5.0e-244 847.8 593 72.0
FAN03G3391 Fragaria x ananassa HOM05D004229 ORTHO05D005468 6.6e-244 847.4 593 72.0
FAN06G0297 Fragaria x ananassa HOM05D004229 ORTHO05D005468 5.6e-243 844.3 593 71.8
TWI38G0761 Tripterygium wilfordii HOM05D004229 ORTHO05D005468 7.3e-243 844.0 596 70.1
FAN06G0013 Fragaria x ananassa HOM05D004229 ORTHO05D005468 1.6e-242 842.8 593 71.7
EL10Ac7g16698 Beta vulgaris HOM05D004229 ORTHO05D005468 2.8e-242 842.0 615 68.9
Gorai.012G005800 Gossypium raimondii HOM05D004229 ORTHO05D005468 3.0e-241 838.6 585 70.9
MSTRG.27482 Avicennia marina HOM05D004229 ORTHO05D005468 4.0e-241 838.2 594 69.4
CiPaw.01G268900 Carya illinoinensis HOM05D004229 ORTHO05D005468 4.0e-241 838.2 593 71.5
Migut.F01959 Erythranthe guttata HOM05D004229 ORTHO05D005468 2.6e-240 835.5 595 69.4
Nn2g13792 Nelumbo nucifera HOM05D004229 ORTHO05D003832 4.4e-240 834.7 594 70.0
THA.LOC104826473 Tarenaya hassleriana HOM05D004229 ORTHO05D005468 4.4e-240 834.7 594 70.2
AL5G35970 Arabidopsis lyrata HOM05D004229 ORTHO05D005468 1.2e-234 816.6 594 67.7
Aa31sc141G10 Aethionema arabicum HOM05D004229 ORTHO05D005468 3.6e-234 815.1 593 67.8
Nitab4.5_0001760g0040 Nicotiana tabacum HOM05D004229 ORTHO05D005468 3.1e-233 812.0 594 69.9
Carub.0005s2147 Capsella rubella HOM05D004229 ORTHO05D005468 6.8e-233 810.8 594 66.7
arahy.Tifrunner.gnm1.ann1.1PX64U Arachis hypogaea HOM05D004229 ORTHO05D005468 2.0e-232 809.3 594 69.7
Thhalv10010229m.g Eutrema salsugineum HOM05D004229 ORTHO05D005468 9.8e-232 807.0 594 67.2
BcaB01g00152 Brassica carinata HOM05D004229 ORTHO05D005468 2.2e-231 805.8 594 67.2
Sp5g07560 Schrenkiella parvula HOM05D004229 ORTHO05D005468 2.2e-231 805.8 594 67.0
Atru.chr12.837 Acer truncatum HOM05D004229 ORTHO05D005468 2.9e-231 805.4 568 70.2
BcaC07g39772 Brassica carinata HOM05D004229 ORTHO05D005468 4.9e-231 804.7 594 67.0
Ciclev10031072m.g Citrus clementina HOM05D004229 ORTHO05D005468 4.9e-231 804.7 595 68.6
Os04g0223000 Oryza sativa ssp. japonica HOM05D004229 ORTHO05D005468 8.3e-231 803.9 592 68.8
AT3G54860 Arabidopsis thaliana HOM05D004229 ORTHO05D005468 1.4e-230 803.1 594 66.2
Hund24846 Selenicereus undatus HOM05D004229 ORTHO05D005468 4.1e-230 801.6 562 71.4
Nitab4.5_0000096g0310 Nicotiana tabacum HOM05D004229 ORTHO05D005468 2.3e-228 795.8 622 66.6
Zm00001eb356850 Zea mays HOM05D004229 ORTHO05D005468 1.9e-227 792.7 593 68.0
CARHR164840 Cardamine hirsuta HOM05D004229 ORTHO05D005468 1.6e-226 789.6 597 66.0
COL.COLO4_17138 Corchorus olitorius HOM05D004229 ORTHO05D005468 1.6e-226 789.6 595 67.2
BcaNung06953 Brassica carinata HOM05D004229 ORTHO05D005468 8.1e-226 787.3 595 66.1
Haze_16858 Corylus avellana HOM05D004229 ORTHO05D005468 1.4e-225 786.6 612 66.7
arahy.Tifrunner.gnm1.ann1.DJS8Z9 Arachis hypogaea HOM05D004229 ORTHO05D005468 2.0e-224 782.7 593 67.3
arahy.Tifrunner.gnm1.ann1.LC1BQN Arachis hypogaea HOM05D004229 ORTHO05D005468 2.0e-224 782.7 593 67.5
Duzib114G0264 Durio zibethinus HOM05D004229 ORTHO05D005468 2.0e-224 782.7 594 67.0
C08p30050 Brassica napus HOM05D004229 ORTHO05D005468 2.2e-223 779.2 594 65.7
BolC8t50614H Brassica oleracea HOM05D004229 ORTHO05D005468 2.2e-223 779.2 594 65.7
A09p47800 Brassica napus HOM05D004229 ORTHO05D005468 3.7e-223 778.5 594 65.5
FAN10G1099 Fragaria x ananassa HOM05D004229 ORTHO05D005468 4.9e-223 778.1 602 66.6
BraA09t40237Z Brassica rapa HOM05D004229 ORTHO05D005468 2.3e-220 769.2 614 63.7
Sabra08G0023800 Salix brachista HOM05D004229 ORTHO05D005468 4.7e-218 761.5 539 69.8
PGSC0003DMG400023478 Solanum tuberosum HOM05D004229 ORTHO05D005468 1.8e-217 759.6 593 66.3
Peaxi162Scf00176g01415 Petunia axillaris HOM05D004229 ORTHO05D005468 8.9e-217 757.3 628 63.5
FAN18G2159 Fragaria x ananassa HOM05D004229 ORTHO05D005468 3.4e-216 755.4 593 64.2
Sabra10G0174900 Salix brachista HOM05D004229 ORTHO05D005468 7.1e-214 747.7 545 68.6
Lj2C19G5 Lonicera japonica HOM05D004229 ORTHO05D005468 9.2e-214 747.3 632 62.7
arahy.Tifrunner.gnm1.ann1.LJ1MV6 Arachis hypogaea HOM05D004229 ORTHO05D005468 2.3e-212 742.7 604 64.9
Potri.010G226600 Populus trichocarpa HOM05D004229 ORTHO05D005468 3.6e-210 735.3 504 72.4
SGA_v2.0_scaffold62G21390 Striga asiatica HOM05D004229 ORTHO05D005468 6.2e-210 734.6 594 62.6
Lsat_1_v5_gn_9_70141 Lactuca sativa HOM05D004229 ORTHO05D005468 2.9e-207 725.7 576 64.6
ECA232G1554 Erigeron canadensis HOM05D004229 ORTHO05D005468 1.9e-203 713.0 505 70.5
Mapoly0054s0015 Marchantia polymorpha HOM05D004229 ORTHO05D005468 1.1e-201 707.2 604 59.1
unitig_899.g14450 Utricularia gibba HOM05D004229 ORTHO05D005468 2.0e-200 703.0 607 60.3
DCAR_006417 Daucus carota HOM05D004229 ORTHO05D005468 7.1e-198 694.5 594 61.8
MD07G1170300 Malus domestica HOM05D004229 ORTHO05D005468 9.3e-198 694.1 647 58.4
QL08p054435 Quercus lobata HOM05D004229 ORTHO05D005468 8.7e-196 687.6 582 63.6
SalBow4G2353 Salvia bowleyana HOM05D004229 ORTHO05D005468 2.5e-195 686.0 608 58.4
arahy.Tifrunner.gnm1.ann1.EYW761 Arachis hypogaea HOM05D004229 ORTHO05D005468 6.9e-193 677.9 577 62.7
Pp3c17_5740 Physcomitrium patens HOM05D004229 ORTHO05D005468 1.8e-188 663.3 604 56.8
SalBow4G2572 Salvia bowleyana HOM05D004229 ORTHO05D005468 5.1e-188 661.8 591 58.2
arahy.Tifrunner.gnm1.ann1.ET3M0C Arachis hypogaea HOM05D004229 ORTHO05D005468 1.1e-187 660.6 602 59.8
SMO358G0561 Selaginella moellendorffii HOM05D004229 ORTHO05D005468 2.5e-187 659.4 591 56.7
FvH4_5g35750 Fragaria vesca HOM05D004229 ORTHO05D005468 7.6e-184 647.9 593 58.7
AUR62036467 Chenopodium quinoa HOM05D004229 ORTHO05D005468 8.4e-183 644.4 590 57.3
Cfa001676 Carpinus fangiana HOM05D004229 ORTHO05D005468 1.3e-175 620.5 420 72.9
HPP92_008472 Vanilla planifolia HOM05D004229 ORTHO05D005468 2.9e-175 619.4 592 54.9
Cc02_g10960 Coffea canephora HOM05D004229 ORTHO05D005468 3.4e-168 595.9 421 71.0
Lalb_Chr21g0313711 Lupinus albus HOM05D004229 ORTHO05D005468 1.2e-160 570.9 386 72.8
SHI08894 Sapria himalayana HOM05D004229 ORTHO05D005468 3.5e-136 489.6 533 50.5
AagrBONN_evm.TU.Sc2ySwM_344.2563 Anthoceros agrestis HOM05D004229 ORTHO05D005468 3.4e-131 473.0 421 55.3
MBI09_g03016_MAGBIO Magnolia biondii HOM05D004229 ORTHO05D005468 3.5e-128 463.0 358 67.9
TPR.G10283 Trifolium pratense HOM05D004229 ORTHO05D005468 1.0e-127 461.5 310 72.6
SEGI_16046 Sequoiadendron giganteum HOM05D004229 ORTHO05D005468 2.8e-125 453.4 331 70.1
Peaxi162Scf00176g01310 Petunia axillaris HOM05D004229 ORTHO05D005468 6.4e-114 415.6 459 52.3
PSO170G6718 Papaver somniferum HOM05D004229 ORTHO05D005468 7.3e-110 402.1 283 69.6
PRCOL_00000311 Prasinoderma coloniale HOM05D004229 ORTHO05D005468 8.1e-109 398.7 625 37.3
FAN04G2411 Fragaria x ananassa HOM05D004229 ORTHO05D005468 1.2e-104 384.8 322 62.1
Carub.0005s2206 Capsella rubella HOM05D004229 ORTHO05D005468 3.0e-103 380.2 320 60.6
AUR62041380 Chenopodium quinoa HOM05D004229 ORTHO05D005468 3.6e-101 373.2 274 67.2
Cre12.g515550 Chlamydomonas reinhardtii HOM05D004229 ORTHO05D005468 1.2e-96 358.2 715 33.7
Cpa.g.sc1603.2 Carica papaya HOM05D004229 ORTHO05D005468 3.1e-92 343.6 234 71.8
FAN13G1026 Fragaria x ananassa HOM05D004229 ORTHO05D005468 3.1e-92 343.6 301 60.8
HPP92_008482 Vanilla planifolia HOM05D004229 ORTHO05D005468 1.9e-89 334.3 234 68.8
QL08p054691 Quercus lobata HOM05D004229 ORTHO05D005468 2.1e-88 330.9 228 71.9
FAN01G0054 Fragaria x ananassa HOM05D004229 ORTHO05D005468 4.8e-77 293.1 218 67.0
Lalb_Chr21g0313701 Lupinus albus HOM05D004229 ORTHO05D005468 2.3e-71 274.2 194 70.1
MCO07G397 Micromonas commoda HOM05D004229 ORTHO05D005468 1.1e-70 271.9 726 27.4
AUR62026961 Chenopodium quinoa HOM05D004229 ORTHO05D005468 2.1e-69 267.7 271 52.4
AUR62041377 Chenopodium quinoa HOM05D004229 ORTHO05D005468 3.8e-66 256.9 204 62.3
CBR_g52604 Chara braunii HOM05D000019 ORTHO05D000048 8.4e-66 255.8 235 53.2
FAN13G0469 Fragaria x ananassa HOM05D004229 ORTHO05D005468 3.2e-65 253.8 283 49.1
Cc02_g10970 Coffea canephora HOM05D004229 ORTHO05D005468 5.5e-65 253.1 164 75.0
arahy.Tifrunner.gnm1.ann1.I4EZ5E Arachis hypogaea HOM05D004229 ORTHO05D005468 5.1e-63 246.5 200 63.5
arahy.Tifrunner.gnm1.ann1.5LR8AY Arachis hypogaea HOM05D004229 ORTHO05D005468 3.1e-60 237.3 243 53.9
CBR_g31454 Chara braunii HOM05D004229 ORTHO05D005468 9.0e-60 235.7 199 59.8
RcHm_v2.0_Chr7g0237381 Rosa chinensis HOM05D004229 ORTHO05D005468 9.0e-60 235.7 283 46.3
Cpa.g.sc912.1 Carica papaya HOM05D004229 ORTHO05D005468 1.0e-50 205.7 148 66.2
SEGI_10422 Sequoiadendron giganteum HOM05D004229 ORTHO05D005468 9.4e-49 199.1 132 71.2
FAN04G2028 Fragaria x ananassa HOM05D004229 ORTHO05D005468 6.1e-48 196.4 138 67.4
QL08p054473 Quercus lobata HOM05D004229 ORTHO05D005468 2.6e-43 181.0 130 68.5
QL08p054558 Quercus lobata HOM05D004229 ORTHO05D005468 3.5e-43 180.6 136 72.1
RcHm_v2.0_Chr7g0237401 Rosa chinensis HOM05D004229 ORTHO05D005468 4.5e-43 180.3 119 72.3
RcHm_v2.0_Chr6g0252451 Rosa chinensis HOM05D004229 ORTHO05D005468 5.0e-42 176.8 123 69.1
Cfa022006 Carpinus fangiana HOM05D004229 ORTHO05D005468 6.5e-42 176.4 490 27.1
arahy.Tifrunner.gnm1.ann1.ED1Y34 Arachis hypogaea HOM05D004229 ORTHO05D005468 1.0e-39 169.1 146 60.3
CBR_g52606 Chara braunii HOM05D004229 ORTHO05D005468 2.8e-29 134.4 116 60.3
SHI08895 Sapria himalayana HOM05D004229 ORTHO05D005468 1.1e-28 132.5 75 82.7
Carub.0005s2207 Capsella rubella HOM05D004229 ORTHO05D005468 2.4e-20 104.8 84 63.1
RcHm_v2.0_Chr7g0237391 Rosa chinensis HOM05D004229 ORTHO05D005468 3.5e-19 100.9 72 66.7
MELO3C028235.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.2e-16 92.4 51 80.4
MELO3C029984.2 Cucumis melo HOM05D004229 ORTHO05D025211 3.6e-16 90.9 72 63.9
Sopen01g012580 Solanum pennellii HOM05D004229 ORTHO05D026150 2.3e-15 88.2 52 80.8
Solyc05g024120.3 Solanum lycopersicum HOM05D004229 ORTHO05D005468 1.5e-14 85.5 115 43.5
MBI09_g03431_MAGBIO Magnolia biondii HOM05D004229 ORTHO05D005468 3.4e-14 84.3 58 72.4
AUR62041379 Chenopodium quinoa HOM05D004229 ORTHO05D000001 4.9e-13 80.5 91 51.6
Sopen01g007880 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-13 80.1 52 75.0
Sopen05g018790 Solanum pennellii HOM05D004229 ORTHO05D005468 2.3e-10 71.6 115 37.4
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 2.5e-09 68.2 52 67.3
Solyc01g016900.1 Solanum lycopersicum HOM05D004229 ORTHO05D026150 7.3e-09 66.6 69 52.2
SEGI_01819 Sequoiadendron giganteum HOM05D004229 ORTHO05D025211 2.1e-08 65.1 54 61.1
MELO3C027676.2 Cucumis melo HOM05D004229 ORTHO05D025211 8.0e-08 63.2 51 62.7
Sopen05g016270 Solanum pennellii HOM05D004229 ORTHO05D026150 6.8e-07 60.1 34 82.4
Sopen05g018750 Solanum pennellii HOM05D000004 ORTHO05D000002 6.8e-07 60.1 86 44.2
Solyc11g030770.1 Solanum lycopersicum HOM05D004229 ORTHO05D005468 4.4e-06 57.4 37 75.7


User provided reference genes

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