Gene: Solyc05g055600.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g055600.4
  • Transcript Identifier Solyc05g055600.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 64547994-64554985 : positive

Gene Family Information

  • ID HOM05D004229
  • #Genes/#Species 168/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g055600.4.1
  • uniprot A0A3Q7GN19
  • gene_id Solyc05g055600

Descriptions

  • Description Vacuolar protein-sorting-associated protein 33-like protein (AHRD V3.3 *** A0A1J6K8K8_NICAT)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IBA
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IBA
GOA Databaseintracellular protein transport
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT3G54860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033263
IBA
GOA DatabaseCORVET complex
GO:0005773
IBA
GOA Databasevacuole
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT3G54860
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT3G54860
GO:0030897
ISO
PLAZA Integrative OrthologyHOPS complex AT3G54860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043127 Sec1-like, domain 3a
IPR001619 Sec1-like protein
IPR036045 Sec1-like superfamily
IPR027482 Sec1-like, domain 2
IPR043154 Sec1-like, domain 1
Mapman id Description
22.3.4.9.4 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.component VPS33