Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G042 Amborella trichopoda HOM05D006076 ORTHO05D007506 4.5e-205 717.6 344 100.0
TAR629G1722 Trochodendron aralioides HOM05D006076 ORTHO05D007506 1.4e-121 440.3 376 59.6
QL04p075342 Quercus lobata HOM05D006076 ORTHO05D007506 1.9e-115 419.9 347 60.5
Aqoxy3G04116 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 4.3e-115 418.7 370 56.8
FAN08G1959 Fragaria x ananassa HOM05D006076 ORTHO05D007506 7.4e-115 417.9 359 57.7
RcHm_v2.0_Chr2g0106631 Rosa chinensis HOM05D006076 ORTHO05D007506 2.8e-114 416.0 347 60.2
Cc07_g12790 Coffea canephora HOM05D006076 ORTHO05D007506 3.7e-114 415.6 362 56.9
DCAR_003407 Daucus carota HOM05D006076 ORTHO05D007506 4.8e-114 415.2 364 57.7
MD15G1436000 Malus domestica HOM05D006076 ORTHO05D007506 4.8e-114 415.2 365 57.8
FAN18G0334 Fragaria x ananassa HOM05D006076 ORTHO05D007506 1.1e-113 414.1 358 59.2
FAN04G0499 Fragaria x ananassa HOM05D006076 ORTHO05D007506 1.8e-113 413.3 361 58.4
Lalb_Chr17g0345871 Lupinus albus HOM05D006076 ORTHO05D007506 1.8e-113 413.3 369 56.4
Rhsim10G0185200 Rhododendron simsii HOM05D006076 ORTHO05D007506 2.4e-113 412.9 363 57.9
CANSAT11G2533 Cannabis sativa HOM05D006076 ORTHO05D007506 4.1e-113 412.1 360 56.1
FvH4_5g28670 Fragaria vesca HOM05D006076 ORTHO05D007506 4.1e-113 412.1 358 58.9
MD08G1242300 Malus domestica HOM05D006076 ORTHO05D007506 4.1e-113 412.1 362 56.1
PSO782G3474 Papaver somniferum HOM05D006076 ORTHO05D007506 6.9e-113 411.4 373 56.0
RcHm_v2.0_Chr7g0220631 Rosa chinensis HOM05D006076 ORTHO05D007506 6.9e-113 411.4 362 55.5
VMungo0647G0600 Vigna mungo HOM05D006076 ORTHO05D007506 1.2e-112 410.6 361 58.2
Dinv19079 Davidia involucrata HOM05D006076 ORTHO05D007506 1.5e-112 410.2 369 56.4
Sabra17G0117900 Salix brachista HOM05D006076 ORTHO05D007506 1.5e-112 410.2 344 59.6
Thecc.04G060400 Theobroma cacao HOM05D006076 ORTHO05D007506 1.5e-112 410.2 360 58.3
Potri.017G139700 Populus trichocarpa HOM05D006076 ORTHO05D007506 2.6e-112 409.5 345 60.0
CiPaw.11G066500 Carya illinoinensis HOM05D006076 ORTHO05D007506 4.5e-112 408.7 369 56.9
PSO063G3081 Papaver somniferum HOM05D006076 ORTHO05D007506 7.7e-112 407.9 373 55.5
GSVIVG01013049001 Vitis vinifera HOM05D006076 ORTHO05D007506 7.7e-112 407.9 366 56.6
Nitab4.5_0000005g0100 Nicotiana tabacum HOM05D006076 ORTHO05D007506 2.9e-111 406.0 364 55.5
LjContig00141g0009861 Lotus japonicus HOM05D006076 ORTHO05D007506 3.8e-111 405.6 367 56.4
Gohir.D11G176000 Gossypium hirsutum HOM05D006076 ORTHO05D007506 5.0e-111 405.2 359 56.3
Nitab4.5_0002648g0050 Nicotiana tabacum HOM05D006076 ORTHO05D007506 8.5e-111 404.4 364 55.5
CSS0031022 Camellia sinensis var. sinensis HOM05D006076 ORTHO05D007506 1.1e-110 404.1 381 55.1
Phvul.008G241000 Phaseolus vulgaris HOM05D006076 ORTHO05D007506 1.1e-110 404.1 370 55.9
Manes.01G123200 Manihot esculenta HOM05D006076 ORTHO05D007506 1.4e-110 403.7 360 57.8
COL.COLO4_20049 Corchorus olitorius HOM05D006076 ORTHO05D007506 1.9e-110 403.3 359 57.1
Actinidia17164 Actinidia chinensis HOM05D006076 ORTHO05D007506 5.5e-110 401.7 367 56.1
Sopen02g011760 Solanum pennellii HOM05D006076 ORTHO05D007506 7.2e-110 401.4 363 53.7
Hma1.2p1_0034F.1_g021380 Hydrangea macrophylla HOM05D006076 ORTHO05D007506 1.2e-109 400.6 374 55.3
MSTRG.15638 Avicennia marina HOM05D006076 ORTHO05D007506 1.6e-109 400.2 363 55.1
TWI53G1019 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 1.6e-109 400.2 359 56.3
arahy.Tifrunner.gnm1.ann1.19NIP2 Arachis hypogaea HOM05D006076 ORTHO05D007506 2.1e-109 399.8 371 55.3
arahy.Tifrunner.gnm1.ann1.T03I92 Arachis hypogaea HOM05D006076 ORTHO05D007506 2.1e-109 399.8 371 55.3
Psat2g042920 Pisum sativum HOM05D006076 ORTHO05D007506 3.6e-109 399.1 368 54.6
SGA_v2.0_scaffold115G32050 Striga asiatica HOM05D006076 ORTHO05D007506 3.6e-109 399.1 359 54.0
TPR.G5335 Trifolium pratense HOM05D006076 ORTHO05D007506 4.6e-109 398.7 368 55.2
TWI74G1437 Tripterygium wilfordii HOM05D006076 ORTHO05D007506 4.6e-109 398.7 359 56.3
Sc09g0004490 Simmondsia chinensis HOM05D006076 ORTHO05D007506 7.9e-109 397.9 364 52.7
Glyma.02G240700 Glycine max HOM05D006076 ORTHO05D007506 3.0e-108 396.0 361 56.0
Glyma.14G210200 Glycine max HOM05D006076 ORTHO05D007506 3.0e-108 396.0 368 55.4
SalBow5G0086 Salvia bowleyana HOM05D006076 ORTHO05D007506 4.3e-107 392.1 360 54.4
SalBow5G5467 Salvia bowleyana HOM05D006076 ORTHO05D007506 4.3e-107 392.1 360 54.4
Ca_05760_v3 Cicer arietinum L. HOM05D006076 ORTHO05D007506 2.2e-106 389.8 368 53.5
THA.LOC104820862 Tarenaya hassleriana HOM05D006076 ORTHO05D007506 2.2e-106 389.8 366 53.8
Eucgr.J01641 Eucalyptus grandis HOM05D006076 ORTHO05D007506 8.2e-106 387.9 363 53.4
Manes.02G080800 Manihot esculenta HOM05D006076 ORTHO05D007506 5.3e-105 385.2 376 54.5
PGR042G3996 Punica granatum HOM05D006076 ORTHO05D007506 5.3e-105 385.2 365 54.8
EL10Ac4g08929 Beta vulgaris HOM05D006076 ORTHO05D007506 1.5e-104 383.6 367 53.4
Ciclev10005246m.g Citrus clementina HOM05D006076 ORTHO05D007506 1.5e-104 383.6 364 54.9
AUR62004772 Chenopodium quinoa HOM05D006076 ORTHO05D007506 2.0e-104 383.3 367 53.7
MELO3C019565.2 Cucumis melo HOM05D006076 ORTHO05D007506 3.4e-104 382.5 361 54.3
Duzib138G0191 Durio zibethinus HOM05D006076 ORTHO05D007506 5.9e-104 381.7 334 59.0
CsaV3_3G018020 Cucumis sativus L. HOM05D006076 ORTHO05D007506 7.7e-104 381.3 363 54.5
Sp6g26940 Schrenkiella parvula HOM05D006076 ORTHO05D007506 7.7e-104 381.3 365 54.0
ClCG05G010470 Citrullus lanatus HOM05D006076 ORTHO05D007506 1.0e-103 380.9 364 53.3
BcaC04g18810 Brassica carinata HOM05D006076 ORTHO05D007506 2.9e-103 379.4 363 54.3
Solyc02g036380.3 Solanum lycopersicum HOM05D006076 ORTHO05D007506 2.9e-103 379.4 412 47.3
Os02g0117800 Oryza sativa ssp. japonica HOM05D006076 ORTHO05D007506 5.0e-103 378.6 363 52.1
Aa31LG11G12390 Aethionema arabicum HOM05D006076 ORTHO05D007506 6.5e-103 378.3 363 53.4
BraA10t44270Z Brassica rapa HOM05D006076 ORTHO05D007506 8.5e-103 377.9 365 53.7
Thhalv10014026m.g Eutrema salsugineum HOM05D006076 ORTHO05D007506 8.5e-103 377.9 363 54.3
Gorai.007G188600 Gossypium raimondii HOM05D006076 ORTHO05D007506 1.1e-102 377.5 433 47.1
BolC9t58826H Brassica oleracea HOM05D006076 ORTHO05D007506 1.4e-102 377.1 364 53.6
Migut.K00743 Erythranthe guttata HOM05D006076 ORTHO05D007506 1.4e-102 377.1 364 52.2
A02p04100 Brassica napus HOM05D006076 ORTHO05D007506 1.9e-102 376.7 363 53.2
BraA02t05373Z Brassica rapa HOM05D006076 ORTHO05D007506 1.9e-102 376.7 363 54.0
AL6G28370 Arabidopsis lyrata HOM05D006076 ORTHO05D007506 2.5e-102 376.3 362 54.1
HanXRQChr16g0532291 Helianthus annuus HOM05D006076 ORTHO05D007506 2.5e-102 376.3 362 52.2
CARHR195920 Cardamine hirsuta HOM05D006076 ORTHO05D007506 3.2e-102 375.9 363 53.4
BcaC03g18547 Brassica carinata HOM05D006076 ORTHO05D007506 4.2e-102 375.6 362 52.8
Oeu012318.2 Olea europaea HOM05D006076 ORTHO05D007506 4.2e-102 375.6 439 46.7
SEGI_25199 Sequoiadendron giganteum HOM05D006076 ORTHO05D007506 4.2e-102 375.6 387 52.7
unitig_0.g2639 Utricularia gibba HOM05D006076 ORTHO05D007506 4.2e-102 375.6 367 50.1
A10p22110 Brassica napus HOM05D006076 ORTHO05D007506 7.2e-102 374.8 365 53.2
CAN.G123.2 Capsicum annuum HOM05D006076 ORTHO05D007506 9.4e-102 374.4 350 54.3
Medtr5g076920 Medicago truncatula HOM05D006076 ORTHO05D007506 9.4e-102 374.4 379 52.0
AT5G17290 Arabidopsis thaliana HOM05D006076 ORTHO05D007506 1.2e-101 374.0 362 53.9
CDE04G2995 Ceratophyllum demersum HOM05D006076 ORTHO05D007506 1.2e-101 374.0 352 54.5
BcaB08g36791 Brassica carinata HOM05D006076 ORTHO05D007506 2.1e-101 373.2 362 53.3
Lsat_1_v5_gn_3_67061 Lactuca sativa HOM05D006076 ORTHO05D007506 2.1e-101 373.2 360 51.9
Carub.0006s1548 Capsella rubella HOM05D006076 ORTHO05D007506 3.6e-101 372.5 364 51.9
C02p08950 Brassica napus HOM05D006076 ORTHO05D007506 1.0e-100 370.9 363 52.1
BolC2t06804H Brassica oleracea HOM05D006076 ORTHO05D007506 1.0e-100 370.9 363 52.1
vmacro20467 Vaccinium macrocarpon HOM05D006076 ORTHO05D007506 2.2e-98 363.2 487 43.9
RcHm_v2.0_Chr5g0080521 Rosa chinensis HOM05D006076 ORTHO05D007506 8.2e-98 361.3 302 58.9
Zm00001eb230080 Zea mays HOM05D006076 ORTHO05D007506 1.4e-97 360.5 363 48.8
Cfa019426 Carpinus fangiana HOM05D006076 ORTHO05D007506 3.1e-97 359.4 332 54.2
C09p59900 Brassica napus HOM05D006076 ORTHO05D007506 3.5e-96 355.9 409 47.9
Lj4A252G57 Lonicera japonica HOM05D006076 ORTHO05D007506 4.7e-93 345.5 335 53.7
Mapoly0019s0054 Marchantia polymorpha HOM05D006076 ORTHO05D007506 1.4e-92 344.0 419 45.1
Sed0003951 Sechium edule HOM05D006076 ORTHO05D007506 6.7e-92 341.7 332 55.1
Solyc06g043140.4 Solanum lycopersicum HOM05D006076 ORTHO05D007506 5.7e-91 338.6 361 47.9
Gohir.A11G169800 Gossypium hirsutum HOM05D006076 ORTHO05D007506 1.7e-90 337.0 359 49.3
Atru.chr1.2153 Acer truncatum HOM05D006076 ORTHO05D007506 4.8e-90 335.5 238 66.0
ECA246G5189 Erigeron canadensis HOM05D006076 ORTHO05D000091 1.3e-87 327.4 323 51.1
Pp3c4_11110 Physcomitrium patens HOM05D006076 ORTHO05D007506 8.5e-87 324.7 376 45.5
AagrBONN_evm.TU.Sc2ySwM_344.1639 Anthoceros agrestis HOM05D006076 ORTHO05D007506 3.4e-83 312.8 402 42.0
Hund22204 Selenicereus undatus HOM05D006076 ORTHO05D007506 4.5e-80 302.4 365 46.0
Prupe.1G579800 Prunus persica HOM05D006076 ORTHO05D007506 1.3e-79 300.8 175 77.1
Ah.05g177670 Amaranthus hybridus HOM05D006076 ORTHO05D007506 2.9e-79 299.7 337 47.8
Peaxi162Scf00294g00628 Petunia axillaris HOM05D006076 ORTHO05D007506 1.9e-78 297.0 360 45.0
Actinidia40417 Actinidia chinensis HOM05D006076 ORTHO05D007506 2.7e-77 293.1 243 59.7
AUR62037480 Chenopodium quinoa HOM05D006076 ORTHO05D007506 6.1e-77 292.0 204 68.1
SMO116G0154 Selaginella moellendorffii HOM05D006076 ORTHO05D007506 2.0e-75 287.0 367 43.1
Cpa.g.sc178.26 Carica papaya HOM05D006076 ORTHO05D007506 5.0e-71 272.3 153 79.7
MBI06_g30602_MAGBIO Magnolia biondii HOM05D006076 ORTHO05D007506 6.6e-71 271.9 280 51.4
Nn4g24719 Nelumbo nucifera HOM05D006076 ORTHO05D007506 1.1e-70 271.2 294 50.0
TAR629G0059 Trochodendron aralioides HOM05D006076 ORTHO05D007506 9.2e-65 251.5 128 86.7
QL04p075308 Quercus lobata HOM05D006076 ORTHO05D007506 1.2e-61 241.1 129 86.0
HPP92_002577 Vanilla planifolia HOM05D006076 ORTHO05D007506 6.4e-50 202.2 271 44.3
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 6.4e-50 202.2 271 44.3
Haze_08537 Corylus avellana HOM05D006076 ORTHO05D007506 5.6e-46 189.1 370 34.1
QL04p075158 Quercus lobata HOM05D006076 ORTHO05D007506 5.6e-46 189.1 222 45.9
CBR_g50474 Chara braunii HOM05D001161 ORTHO05D000497 3.2e-41 173.3 130 56.9
QL04p043726 Quercus lobata HOM05D000176 ORTHO05D007506 1.9e-33 147.5 90 76.7
QL04p075322 Quercus lobata HOM05D006076 ORTHO05D007506 1.1e-30 138.3 75 84.0
HanXRQChr02g0046461 Helianthus annuus HOM05D006076 ORTHO05D007506 5.4e-25 119.4 209 34.4
HanXRQChr16g0508921 Helianthus annuus HOM05D006076 ORTHO05D007506 5.4e-25 119.4 209 34.4
Cpa.g.sc178.27 Carica papaya HOM05D006076 ORTHO05D007506 7.1e-25 119.0 190 38.4
Cre14.g630907 Chlamydomonas reinhardtii HOM05D006076 ORTHO05D007506 2.5e-22 110.5 217 33.2
BcaNung00408 Brassica carinata HOM05D006076 ORTHO05D007506 7.6e-19 99.0 222 34.2
Aqoxy531s001 Aquilegia oxysepala HOM05D006076 ORTHO05D007506 7.1e-17 92.4 134 41.0
QL04p075364 Quercus lobata HOM05D000397 ORTHO05D007506 1.8e-12 77.8 77 49.4
AUR62037479 Chenopodium quinoa HOM05D006076 ORTHO05D007506 3.4e-11 73.6 129 38.0


User provided reference genes

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