Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 0.0e+00 1254.6 656 100.0
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 5.5e-143 512.3 642 46.4
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 4.4e-140 502.7 648 47.2
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 1.6e-134 484.2 405 63.7
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 9.7e-132 474.9 467 53.3
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 4.1e-130 469.5 366 66.4
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 5.3e-130 469.2 659 47.5
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 2.0e-129 467.2 350 65.4
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 1.0e-128 464.9 650 45.1
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 2.9e-128 463.4 358 63.7
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 3.8e-128 463.0 652 46.5
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 3.8e-128 463.0 316 71.8
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 8.5e-128 461.8 322 68.0
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 1.9e-127 460.7 374 62.8
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 2.5e-127 460.3 322 68.0
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 1.0e-125 454.9 653 44.3
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 1.0e-125 454.9 650 43.5
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 4.0e-125 453.0 310 69.7
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 6.8e-125 452.2 653 45.3
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 6.8e-125 452.2 447 58.6
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 1.5e-124 451.1 309 70.2
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 1.5e-124 451.1 359 67.7
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 1.3e-123 448.0 303 69.6
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 2.2e-123 447.2 351 61.5
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 2.2e-123 447.2 304 69.4
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 2.8e-123 446.8 728 41.6
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 3.7e-123 446.4 304 69.1
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 4.8e-123 446.0 304 69.4
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 6.3e-123 445.7 623 46.2
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 4.1e-122 443.0 351 63.2
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 2.0e-121 440.7 646 45.0
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 2.0e-121 440.7 351 62.1
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 3.5e-121 439.9 323 66.6
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 5.0e-120 436.0 649 45.5
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 5.0e-120 436.0 303 67.7
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 8.5e-120 435.3 302 67.5
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 1.1e-119 434.9 417 55.9
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 1.1e-119 434.9 303 68.0
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 1.5e-119 434.5 307 66.8
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 4.2e-119 433.0 306 67.0
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 1.2e-118 431.4 650 44.0
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 1.0e-117 428.3 302 66.6
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 4.0e-117 426.4 711 41.4
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 5.2e-117 426.0 648 43.2
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 6.8e-117 425.6 386 57.5
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 6.8e-117 425.6 309 65.7
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 8.8e-117 425.2 302 66.2
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 8.8e-117 425.2 664 45.6
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 3.4e-116 423.3 302 65.2
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 3.4e-116 423.3 370 59.5
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 5.7e-116 422.5 304 66.1
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 5.7e-116 422.5 360 59.4
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 3.7e-115 419.9 687 42.5
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 4.8e-115 419.5 395 58.0
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 8.3e-115 418.7 350 62.9
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 1.4e-114 417.9 302 65.9
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 1.8e-114 417.5 397 59.2
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 3.1e-114 416.8 303 66.3
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 7.0e-114 415.6 363 59.8
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 5.9e-113 412.5 353 62.0
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 1.0e-112 411.8 692 41.0
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 2.9e-112 410.2 400 56.5
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 3.8e-112 409.8 323 63.2
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 8.6e-112 408.7 356 57.9
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 1.2e-110 404.8 458 50.9
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 2.1e-110 404.1 366 53.6
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 8.0e-110 402.1 355 59.4
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 1.8e-109 401.0 375 60.3
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 1.8e-109 401.0 302 62.3
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 2.0e-108 397.5 304 62.8
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 3.4e-108 396.7 394 53.0
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 2.8e-107 393.7 321 59.2
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.8e-107 393.7 304 62.2
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 4.9e-107 392.9 304 61.5
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 8.3e-107 392.1 323 59.1
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.4e-106 391.3 302 61.3
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 1.4e-106 391.3 272 66.9
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 1.4e-106 391.3 302 62.3
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 3.2e-106 390.2 302 61.9
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 4.1e-106 389.8 302 61.6
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 4.1e-106 389.8 302 61.6
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 5.4e-106 389.4 302 61.3
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 5.4e-106 389.4 302 61.3
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 5.9e-105 386.0 302 60.6
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 3.9e-104 383.3 633 40.8
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 8.6e-104 382.1 328 60.4
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 1.5e-100 371.3 730 38.4
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 2.0e-100 370.9 295 60.3
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.9e-99 367.1 308 57.5
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 4.1e-98 363.2 299 57.9
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 4.6e-97 359.8 351 51.9
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 3.9e-96 356.7 349 56.7
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 6.6e-96 355.9 301 56.8
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 1.9e-95 354.4 360 54.2
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 1.2e-94 351.7 398 47.5
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 1.7e-91 341.3 632 40.0
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 3.7e-91 340.1 305 55.1
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 8.3e-91 339.0 679 37.0
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 1.4e-90 338.2 396 46.0
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 1.4e-90 338.2 396 46.0
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 3.3e-87 327.0 398 44.2
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 1.2e-86 325.1 297 53.5
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 2.8e-86 323.9 700 36.4
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 6.8e-85 319.3 395 43.5
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 1.5e-84 318.2 297 53.2
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 2.1e-81 307.8 304 52.0
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 4.6e-81 306.6 275 56.4
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 6.6e-80 302.8 340 45.9
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 2.4e-77 294.3 338 44.4
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 6.0e-73 279.6 342 41.5
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 3.9e-72 276.9 265 54.7
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 6.6e-64 249.6 267 50.9
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 1.5e-63 248.4 181 62.4
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.3e-62 245.4 282 50.0
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 5.3e-61 240.0 179 61.5
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 4.5e-60 236.9 295 50.2
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 7.1e-58 229.6 144 75.0
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 5.6e-55 219.9 284 41.9
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 1.4e-45 188.7 391 33.2
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 6.9e-45 186.4 124 73.4
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 2.3e-40 171.4 294 36.7
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 3.3e-31 141.0 94 74.5
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 5.5e-26 123.6 186 38.7
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 2.0e-23 115.2 113 49.6
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.0e-20 105.1 109 47.7
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 1.1e-18 99.4 68 67.6
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 5.2e-16 90.5 68 60.3
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 5.2e-16 90.5 62 64.5
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 7.2e-10 70.1 53 56.6
Oeu017817.1 Olea europaea HOM05D001353 ORTHO05D002359 8.0e-09 66.6 61 45.9
MSTRG.15763 Avicennia marina HOM05D005778 ORTHO05D038954 6.3e-06 57.0 78 64.1


User provided reference genes

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