Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G299 Amborella trichopoda HOM05D002628 ORTHO05D002785 3.6e-211 739.2 850 100.0
Nn1g07877 Nelumbo nucifera HOM05D002628 ORTHO05D002785 4.6e-49 200.7 295 46.8
Atru.chr5.2101 Acer truncatum HOM05D002628 ORTHO05D002785 3.3e-47 194.5 287 46.7
CANSAT01G2524 Cannabis sativa HOM05D002628 ORTHO05D002785 6.2e-46 190.3 276 46.7
CiPaw.04G105000 Carya illinoinensis HOM05D002628 ORTHO05D002785 4.0e-45 187.6 284 45.4
GSVIVG01028685001 Vitis vinifera HOM05D002628 ORTHO05D002785 9.0e-45 186.4 282 45.7
Ciclev10018446m.g Citrus clementina HOM05D002628 ORTHO05D002785 2.0e-44 185.3 274 45.6
CiPaw.03G148700 Carya illinoinensis HOM05D002628 ORTHO05D002785 3.4e-44 184.5 278 46.8
QL09p053994 Quercus lobata HOM05D002628 ORTHO05D002785 1.3e-43 182.6 294 43.5
TAR362G0009 Trochodendron aralioides HOM05D002628 ORTHO05D002785 1.3e-43 182.6 295 45.1
Thecc.01G224600 Theobroma cacao HOM05D002628 ORTHO05D002785 2.9e-43 181.4 274 44.2
Haze_24810 Corylus avellana HOM05D002628 ORTHO05D002785 6.4e-43 180.3 283 44.9
MD10G1163500 Malus domestica HOM05D002628 ORTHO05D002785 6.4e-43 180.3 277 45.5
Actinidia37601 Actinidia chinensis HOM05D002628 ORTHO05D002785 4.2e-42 177.6 305 43.0
Prupe.8G201800 Prunus persica HOM05D002628 ORTHO05D002785 5.4e-42 177.2 277 45.8
PSO675G2169 Papaver somniferum HOM05D002628 ORTHO05D002785 7.1e-42 176.8 291 44.7
Dinv12687 Davidia involucrata HOM05D002628 ORTHO05D002785 9.3e-42 176.4 283 44.5
Duzib138G1695 Durio zibethinus HOM05D002628 ORTHO05D002785 1.2e-41 176.0 270 44.4
Cfa002577 Carpinus fangiana HOM05D002628 ORTHO05D002785 2.1e-41 175.3 273 45.8
Duzib211G0579 Durio zibethinus HOM05D002628 ORTHO05D002785 4.6e-41 174.1 276 41.7
Aqoxy6G02008 Aquilegia oxysepala HOM05D002628 ORTHO05D002785 1.3e-40 172.6 278 44.6
Duzib133G0258 Durio zibethinus HOM05D002628 ORTHO05D002785 1.3e-40 172.6 275 43.6
Potri.014G189900 Populus trichocarpa HOM05D002628 ORTHO05D002785 1.3e-40 172.6 270 43.0
HPP92_000545 Vanilla planifolia HOM05D002628 ORTHO05D002785 1.7e-40 172.2 282 42.6
Dinv19196 Davidia involucrata HOM05D002628 ORTHO05D002785 3.0e-40 171.4 278 43.9
MD05G1174400 Malus domestica HOM05D002628 ORTHO05D002785 6.6e-40 170.2 277 45.1
Gohir.A11G137900 Gossypium hirsutum HOM05D002628 ORTHO05D002785 1.5e-39 169.1 275 43.6
Sabra02G0185300 Salix brachista HOM05D002628 ORTHO05D002785 1.5e-39 169.1 265 43.0
Hma1.2p1_0226F.1_g095630 Hydrangea macrophylla HOM05D002628 ORTHO05D002785 9.6e-39 166.4 280 43.2
TAR633G2086 Trochodendron aralioides HOM05D002628 ORTHO05D002785 9.6e-39 166.4 286 44.8
Rhsim01G0255500 Rhododendron simsii HOM05D002628 ORTHO05D002785 2.1e-38 165.2 304 41.8
Gorai.007G155000 Gossypium raimondii HOM05D002628 ORTHO05D002785 4.8e-38 164.1 275 42.9
Gohir.A08G194900 Gossypium hirsutum HOM05D002628 ORTHO05D002785 8.1e-38 163.3 268 42.9
Glyma.18G169600 Glycine max HOM05D002628 ORTHO05D002785 1.1e-37 162.9 276 40.6
PGR083G0125 Punica granatum HOM05D002628 ORTHO05D002785 1.1e-37 162.9 278 42.4
Actinidia09479 Actinidia chinensis HOM05D002628 ORTHO05D002785 4.0e-37 161.0 285 42.5
COL.COLO4_15677 Corchorus olitorius HOM05D002628 ORTHO05D002785 4.0e-37 161.0 275 41.1
RcHm_v2.0_Chr6g0284671 Rosa chinensis HOM05D002628 ORTHO05D002785 5.3e-37 160.6 285 43.2
Glyma.08G352600 Glycine max HOM05D002628 ORTHO05D002785 1.2e-36 159.5 276 40.6
Manes.12G045400 Manihot esculenta HOM05D002628 ORTHO05D002785 1.5e-36 159.1 290 41.0
arahy.Tifrunner.gnm1.ann1.23VDWQ Arachis hypogaea HOM05D002628 ORTHO05D002785 5.8e-36 157.1 275 41.5
CsaV3_7G026060 Cucumis sativus L. HOM05D002628 ORTHO05D002785 5.8e-36 157.1 269 42.0
Lalb_Chr03g0041701 Lupinus albus HOM05D002628 ORTHO05D002785 5.8e-36 157.1 277 40.4
Actinidia23721 Actinidia chinensis HOM05D002628 ORTHO05D002785 1.7e-35 155.6 285 42.1
Lalb_Chr19g0125651 Lupinus albus HOM05D002628 ORTHO05D002785 1.7e-35 155.6 275 40.4
Cc01_g16950 Coffea canephora HOM05D002628 ORTHO05D002785 2.2e-35 155.2 285 39.6
MELO3C021029.2 Cucumis melo HOM05D002628 ORTHO05D002785 3.8e-35 154.5 269 41.6
Phvul.008G126600 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 3.8e-35 154.5 278 41.0
vmacro14750 Vaccinium macrocarpon HOM05D002628 ORTHO05D002785 3.8e-35 154.5 292 42.8
Eucgr.H00795 Eucalyptus grandis HOM05D002628 ORTHO05D002785 4.9e-35 154.1 286 39.5
Gohir.A07G201100 Gossypium hirsutum HOM05D002628 ORTHO05D002785 4.9e-35 154.1 273 39.9
Psat3g145600 Pisum sativum HOM05D002628 ORTHO05D002785 4.9e-35 154.1 275 40.0
TWI75G1871 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 4.9e-35 154.1 272 43.0
Gohir.D08G212600 Gossypium hirsutum HOM05D002628 ORTHO05D002785 8.4e-35 153.3 265 40.8
Hund18389 Selenicereus undatus HOM05D002628 ORTHO05D002785 8.4e-35 153.3 278 40.6
VMungo1383G0087 Vigna mungo HOM05D002628 ORTHO05D002785 1.1e-34 152.9 278 40.3
Gohir.D07G207400 Gossypium hirsutum HOM05D002628 ORTHO05D002785 1.4e-34 152.5 268 39.6
Gorai.001G233800 Gossypium raimondii HOM05D002628 ORTHO05D002785 1.4e-34 152.5 268 39.9
Ca_26871_v3 Cicer arietinum L. HOM05D002628 ORTHO05D002785 1.9e-34 152.1 276 39.9
SalBow3G0995 Salvia bowleyana HOM05D002628 ORTHO05D002785 1.9e-34 152.1 268 42.2
Cpa.g.sc8.144 Carica papaya HOM05D002628 ORTHO05D002785 2.4e-34 151.8 282 41.1
Gorai.004G226000 Gossypium raimondii HOM05D002628 ORTHO05D002785 5.4e-34 150.6 267 41.2
Sabra14G0142700 Salix brachista HOM05D002628 ORTHO05D002785 5.4e-34 150.6 271 39.9
Lj2C1130G3 Lonicera japonica HOM05D002628 ORTHO05D002785 2.1e-33 148.7 285 41.4
TPR.G31107 Trifolium pratense HOM05D002628 ORTHO05D002785 2.1e-33 148.7 278 40.3
arahy.Tifrunner.gnm1.ann1.82MK2E Arachis hypogaea HOM05D002628 ORTHO05D002785 7.9e-33 146.7 275 40.7
SalBow6G2694 Salvia bowleyana HOM05D002628 ORTHO05D002785 7.9e-33 146.7 266 39.8
SalBow6G7039 Salvia bowleyana HOM05D002628 ORTHO05D002785 7.9e-33 146.7 266 39.8
TWI36G1593 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 7.9e-33 146.7 272 42.3
Manes.13G047100 Manihot esculenta HOM05D002628 ORTHO05D002785 1.8e-32 145.6 286 38.8
TWI18G0012 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 1.8e-32 145.6 270 41.9
Oeu004073.1 Olea europaea HOM05D002628 ORTHO05D002785 2.3e-32 145.2 276 39.5
Lj1g0019543 Lotus japonicus HOM05D002628 ORTHO05D002785 3.0e-32 144.8 269 39.4
MSTRG.12779 Avicennia marina HOM05D002628 ORTHO05D002785 3.9e-32 144.4 279 38.7
Medtr7g056603 Medicago truncatula HOM05D002628 ORTHO05D002785 3.9e-32 144.4 271 40.2
Sed0004451 Sechium edule HOM05D002628 ORTHO05D002785 3.9e-32 144.4 280 39.6
MSTRG.18000 Avicennia marina HOM05D002628 ORTHO05D002785 5.1e-32 144.1 282 40.1
Lalb_Chr01g0022291 Lupinus albus HOM05D002628 ORTHO05D002785 1.1e-31 142.9 267 39.0
Phvul.010G018800 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 1.5e-31 142.5 287 40.4
DCAR_012651 Daucus carota HOM05D002628 ORTHO05D002785 4.3e-31 141.0 278 39.2
CDE07G1586 Ceratophyllum demersum HOM05D002628 ORTHO05D002785 2.8e-30 138.3 274 39.8
VMungo0331G0007 Vigna mungo HOM05D002628 ORTHO05D002785 2.8e-30 138.3 282 39.4
Lj1A87T37 Lonicera japonica HOM05D002628 ORTHO05D002785 1.1e-29 136.3 270 38.5
Peaxi162Scf00517g00636 Petunia axillaris HOM05D002628 ORTHO05D002785 2.4e-29 135.2 273 39.9
Hund05562 Selenicereus undatus HOM05D002628 ORTHO05D002785 2.4e-29 135.2 276 37.7
SGA_v2.0_scaffold6G03236 Striga asiatica HOM05D002628 ORTHO05D002785 1.5e-28 132.5 267 40.4
Lj3g0004121 Lotus japonicus HOM05D002628 ORTHO05D002785 7.6e-28 130.2 284 37.3
CDE04G0039 Ceratophyllum demersum HOM05D002628 ORTHO05D002785 9.9e-28 129.8 278 40.3
Sc05g0002110 Simmondsia chinensis HOM05D002628 ORTHO05D002785 2.2e-27 128.6 274 38.7
Nitab4.5_0002223g0030 Nicotiana tabacum HOM05D002628 ORTHO05D002785 3.8e-27 127.9 264 39.4
Gohir.D11G144700 Gossypium hirsutum HOM05D002628 ORTHO05D002785 4.9e-27 127.5 275 37.8
SGA_v2.0_scaffold3G01640 Striga asiatica HOM05D002628 ORTHO05D002785 6.4e-27 127.1 269 39.0
AUR62008919 Chenopodium quinoa HOM05D002628 ORTHO05D002785 8.4e-27 126.7 276 36.6
Migut.D02520 Erythranthe guttata HOM05D002628 ORTHO05D002785 8.4e-27 126.7 251 39.8
FvH4_2g18860 Fragaria vesca HOM05D002628 ORTHO05D002785 1.1e-26 126.3 276 39.1
FAN24G2878 Fragaria x ananassa HOM05D002628 ORTHO05D002785 1.1e-26 126.3 276 39.1
ClCG09G008950 Citrullus lanatus HOM05D002628 ORTHO05D002785 2.4e-26 125.2 219 42.0
AUR62001094 Chenopodium quinoa HOM05D002628 ORTHO05D002785 7.1e-26 123.6 271 36.2
Zm00001eb160310 Zea mays HOM05D002628 ORTHO05D002785 7.1e-26 123.6 304 36.5
HanXRQChr04g0108091 Helianthus annuus HOM05D002628 ORTHO05D002785 2.1e-25 122.1 236 39.0
Solyc09g060080.4 Solanum lycopersicum HOM05D002628 ORTHO05D002785 2.1e-25 122.1 285 36.5
FAN27G0734 Fragaria x ananassa HOM05D002628 ORTHO05D002785 2.7e-25 121.7 273 38.1
Nitab4.5_0001564g0060 Nicotiana tabacum HOM05D002628 ORTHO05D002785 2.7e-25 121.7 264 37.5
Sed0013250 Sechium edule HOM05D002628 ORTHO05D002785 3.5e-25 121.3 266 36.8
PGSC0003DMG400017665 Solanum tuberosum HOM05D002628 ORTHO05D002785 1.0e-24 119.8 287 36.9
Potri.002G243350 Populus trichocarpa HOM05D002628 ORTHO05D002785 1.8e-24 119.0 236 38.1
Sopen06g034780 Solanum pennellii HOM05D002628 ORTHO05D002785 2.3e-24 118.6 289 36.7
Zm00001eb160300 Zea mays HOM05D002628 ORTHO05D002785 2.3e-24 118.6 301 35.5
Sopen09g023690 Solanum pennellii HOM05D002628 ORTHO05D002785 5.1e-24 117.5 285 35.8
DCAR_018575 Daucus carota HOM05D002628 ORTHO05D002785 6.7e-24 117.1 313 34.8
EL10Ac7g17849 Beta vulgaris HOM05D002628 ORTHO05D002785 2.5e-23 115.2 268 34.7
Nitab4.5_0003758g0060 Nicotiana tabacum HOM05D002628 ORTHO05D002785 3.3e-23 114.8 281 38.1
Solyc06g083420.3 Solanum lycopersicum HOM05D002628 ORTHO05D002785 3.3e-23 114.8 284 35.6
Aa31LG8G11310 Aethionema arabicum HOM05D002628 ORTHO05D002785 4.3e-23 114.4 266 36.8
Migut.N00620 Erythranthe guttata HOM05D002628 ORTHO05D002785 1.3e-22 112.8 225 38.2
Gohir.A07G157100 Gossypium hirsutum HOM05D002628 ORTHO05D002785 2.1e-22 112.1 264 34.8
Ah.15g093990 Amaranthus hybridus HOM05D002628 ORTHO05D002785 3.7e-22 111.3 275 35.6
vmacro02763 Vaccinium macrocarpon HOM05D002628 ORTHO05D002785 1.1e-21 109.8 288 37.2
ECA236G2127 Erigeron canadensis HOM05D002628 ORTHO05D002785 4.0e-21 107.8 232 38.8
AL3G40640 Arabidopsis lyrata HOM05D002628 ORTHO05D002785 1.2e-20 106.3 267 37.5
Gorai.001G187100 Gossypium raimondii HOM05D002628 ORTHO05D002785 1.5e-20 105.9 264 33.3
Carub.0003s2528 Capsella rubella HOM05D002628 ORTHO05D002785 3.4e-20 104.8 266 36.1
ECA248G1308 Erigeron canadensis HOM05D002628 ORTHO05D002785 3.4e-20 104.8 257 37.0
Lsat_1_v5_gn_8_89820 Lactuca sativa HOM05D002628 ORTHO05D002785 4.5e-20 104.4 244 33.6
CARHR101290 Cardamine hirsuta HOM05D002628 ORTHO05D002785 7.6e-20 103.6 269 36.4
CAN.G771.81 Capsicum annuum HOM05D002628 ORTHO05D002785 2.9e-19 101.7 283 35.3
HanXRQChr14g0445581 Helianthus annuus HOM05D002628 ORTHO05D002785 3.8e-19 101.3 234 36.8
AT3G24880 Arabidopsis thaliana HOM05D002628 ORTHO05D002785 8.4e-19 100.1 268 37.3
Aa31LG9G4800 Aethionema arabicum HOM05D002628 ORTHO05D002785 3.2e-18 98.2 238 37.0
BcaB06g26704 Brassica carinata HOM05D002628 ORTHO05D002785 9.3e-18 96.7 269 35.3
A07p07330 Brassica napus HOM05D002628 ORTHO05D002785 9.3e-18 96.7 272 36.4
BraA07t28522Z Brassica rapa HOM05D002628 ORTHO05D002785 9.3e-18 96.7 272 36.4
CAN.G15.8 Capsicum annuum HOM05D002628 ORTHO05D002785 9.3e-18 96.7 285 36.1
Thhalv10002368m.g Eutrema salsugineum HOM05D002628 ORTHO05D002785 9.3e-18 96.7 265 37.4
C07p11110 Brassica napus HOM05D002628 ORTHO05D002785 2.7e-17 95.1 272 36.0
BolC7t41583H Brassica oleracea HOM05D002628 ORTHO05D002785 2.7e-17 95.1 272 36.0
Eucgr.K02162 Eucalyptus grandis HOM05D002628 ORTHO05D002785 4.6e-17 94.4 273 35.5
Rhsim13G0045600 Rhododendron simsii HOM05D002628 ORTHO05D002785 6.0e-17 94.0 240 38.3
HanXRQChr01g0015181 Helianthus annuus HOM05D002628 ORTHO05D002785 1.3e-16 92.8 231 36.8
Sp3g22600 Schrenkiella parvula HOM05D002628 ORTHO05D002785 2.3e-16 92.0 277 34.3
SpUn0027_0080 Schrenkiella parvula HOM05D002628 ORTHO05D002785 2.3e-16 92.0 277 34.3
HPP92_002818 Vanilla planifolia HOM05D002628 ORTHO05D002785 2.3e-16 92.0 203 36.0
Carub.0003s2526 Capsella rubella HOM05D002628 ORTHO05D002785 3.0e-16 91.7 264 34.1
Glyma.03G081300 Glycine max HOM05D002628 ORTHO05D002785 3.9e-16 91.3 276 34.8
BolC3t17718H Brassica oleracea HOM05D002628 ORTHO05D002785 8.7e-16 90.1 273 33.0
C03p54320 Brassica napus HOM05D002628 ORTHO05D002785 1.1e-15 89.7 235 34.9
BcaC01g03251 Brassica carinata HOM05D002628 ORTHO05D002785 2.5e-15 88.6 235 34.9
AT3G24870 Arabidopsis thaliana HOM05D002628 ORTHO05D002785 4.3e-15 87.8 279 33.3
BcaB08g34428 Brassica carinata HOM05D002628 ORTHO05D002785 1.3e-14 86.3 236 36.4
Oeu022247.1 Olea europaea HOM05D002628 ORTHO05D002785 3.7e-14 84.7 163 35.6
THA.LOC104821651 Tarenaya hassleriana HOM05D002628 ORTHO05D002785 6.3e-14 84.0 267 33.3
Os05g0593300 Oryza sativa ssp. japonica HOM05D002628 ORTHO05D002785 1.0e-11 76.6 234 34.2
Actinidia28152 Actinidia chinensis HOM05D002628 ORTHO05D002785 2.9e-11 75.1 118 42.4
SHI31151 Sapria himalayana HOM05D002628 ORTHO05D002785 6.5e-11 73.9 224 31.7
AL9U11010 Arabidopsis lyrata HOM05D002628 ORTHO05D002785 1.1e-10 73.2 265 31.7
Lsat_1_v5_gn_5_180401 Lactuca sativa HOM05D002628 ORTHO05D002785 1.4e-10 72.8 242 31.4
BcaC06g35765 Brassica carinata HOM05D002628 ORTHO05D002785 1.9e-10 72.4 271 32.5
ECA247G3882 Erigeron canadensis HOM05D002628 ORTHO05D002785 4.2e-10 71.2 243 31.3
CARHR218580 Cardamine hirsuta HOM05D002628 ORTHO05D002785 1.2e-09 69.7 269 30.1
Glyma.16G093800 Glycine max HOM05D002628 ORTHO05D002785 1.6e-09 69.3 273 31.9
Glyma.18G167866 Glycine max HOM05D002628 ORTHO05D002785 2.5e-07 62.0 107 42.1
Glyma.18G168966 Glycine max HOM05D002628 ORTHO05D002785 2.5e-07 62.0 107 42.1
vmacro16364 Vaccinium macrocarpon HOM05D002628 ORTHO05D002785 4.3e-07 61.2 210 33.3
BraA04t16589Z Brassica rapa HOM05D002628 ORTHO05D002785 1.3e-06 59.7 230 30.9
BcaC02g09445 Brassica carinata HOM05D002628 ORTHO05D002785 1.7e-06 59.3 231 29.4
A04p08930 Brassica napus HOM05D002628 ORTHO05D002785 2.2e-06 58.9 230 30.9
BcaB03g16110 Brassica carinata HOM05D002628 ORTHO05D002785 3.7e-06 58.2 229 28.8


User provided reference genes

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