Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 1.0e-254 882.9 443 100.0
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 9.7e-168 594.0 366 82.5
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 9.7e-168 594.0 366 82.5
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 3.5e-165 585.5 374 81.3
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 1.2e-162 577.0 348 83.6
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 6.1e-162 574.7 348 83.3
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 6.7e-161 571.2 346 84.4
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 1.1e-158 563.9 349 81.4
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 1.6e-157 560.1 351 81.5
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 6.5e-156 554.7 350 80.9
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 2.5e-155 552.7 363 79.3
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 1.0e-153 547.4 355 80.3
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 2.3e-153 546.2 352 78.4
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 3.0e-153 545.8 366 76.8
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 5.2e-153 545.0 363 76.3
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 1.5e-152 543.5 355 79.7
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 2.0e-152 543.1 325 84.3
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 4.4e-152 542.0 348 80.5
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 5.7e-152 541.6 349 79.4
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 7.5e-152 541.2 353 80.5
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 6.3e-151 538.1 362 76.0
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 8.3e-151 537.7 328 82.6
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 1.4e-150 537.0 362 75.4
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 1.2e-149 533.9 363 78.0
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 1.6e-149 533.5 375 74.7
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 1.6e-149 533.5 377 74.5
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 2.0e-149 533.1 375 75.5
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.7e-149 532.7 313 85.6
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 2.7e-149 532.7 341 80.9
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 3.5e-149 532.3 325 83.7
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 3.5e-149 532.3 325 84.0
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 5.9e-149 531.6 374 74.3
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 7.7e-149 531.2 370 75.9
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 1.7e-148 530.0 345 77.4
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 2.2e-148 529.6 313 85.3
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 5.0e-148 528.5 372 75.0
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 5.0e-148 528.5 356 75.0
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 6.5e-148 528.1 313 85.0
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 6.5e-148 528.1 340 77.9
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 6.5e-148 528.1 340 79.4
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 6.5e-148 528.1 352 75.6
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 6.5e-148 528.1 351 79.2
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 8.5e-148 527.7 371 75.2
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 1.5e-147 526.9 325 81.5
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 1.5e-147 526.9 352 75.9
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 1.5e-147 526.9 352 75.3
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.9e-147 526.6 346 77.7
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 1.9e-147 526.6 356 77.5
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 2.5e-147 526.2 389 72.8
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 3.2e-147 525.8 327 82.0
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 3.2e-147 525.8 339 78.8
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 3.2e-147 525.8 340 77.1
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 4.2e-147 525.4 353 77.6
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 5.5e-147 525.0 345 76.8
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 9.4e-147 524.2 355 76.1
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 1.2e-146 523.9 332 81.6
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 1.6e-146 523.5 354 76.0
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 2.1e-146 523.1 353 77.1
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 2.1e-146 523.1 352 77.3
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 4.7e-146 521.9 323 81.7
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 6.1e-146 521.5 323 81.7
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 6.1e-146 521.5 371 74.9
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 6.1e-146 521.5 324 81.2
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 8.0e-146 521.2 357 75.6
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 1.0e-145 520.8 351 76.4
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 1.0e-145 520.8 326 81.9
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 1.0e-145 520.8 359 76.6
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.4e-145 520.4 353 74.8
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 1.4e-145 520.4 324 81.2
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 1.4e-145 520.4 351 78.1
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 1.8e-145 520.0 370 74.1
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 1.8e-145 520.0 350 77.7
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 2.3e-145 519.6 313 84.0
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 2.3e-145 519.6 349 76.8
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 2.3e-145 519.6 324 80.6
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 5.2e-145 518.5 313 83.7
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 6.8e-145 518.1 352 77.8
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 8.8e-145 517.7 324 81.2
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 1.2e-144 517.3 366 74.3
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 1.2e-144 517.3 370 71.9
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 1.5e-144 516.9 322 81.4
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 1.5e-144 516.9 348 75.0
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.5e-144 516.9 353 76.8
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 2.6e-144 516.2 361 73.1
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 4.4e-144 515.4 355 74.4
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 7.5e-144 514.6 352 76.1
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 9.8e-144 514.2 360 75.0
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 9.8e-144 514.2 352 76.7
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.7e-143 513.5 360 74.2
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 1.7e-143 513.5 341 77.7
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.2e-143 513.1 360 73.9
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 2.2e-143 513.1 361 73.4
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 6.3e-143 511.5 361 72.9
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 6.3e-143 511.5 361 72.9
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 8.3e-143 511.1 360 75.6
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 8.3e-143 511.1 360 75.6
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 1.1e-142 510.8 322 81.4
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 1.1e-142 510.8 351 76.4
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 1.4e-142 510.4 351 76.6
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 1.4e-142 510.4 360 74.4
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 1.8e-142 510.0 358 75.7
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 1.8e-142 510.0 358 75.7
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 1.8e-142 510.0 322 81.4
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 1.8e-142 510.0 351 75.5
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 1.8e-142 510.0 349 74.8
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 3.1e-142 509.2 360 76.4
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 3.1e-142 509.2 363 74.9
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 3.1e-142 509.2 360 74.2
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 3.1e-142 509.2 360 76.4
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 4.1e-142 508.8 322 79.8
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 9.1e-142 507.7 359 75.8
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 1.2e-141 507.3 313 82.1
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.0e-141 506.5 313 82.7
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 2.0e-141 506.5 370 73.5
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 2.7e-141 506.1 375 72.0
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 2.7e-141 506.1 347 76.9
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 3.5e-141 505.8 350 73.4
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 4.5e-141 505.4 352 75.0
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 5.9e-141 505.0 367 70.8
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 7.7e-141 504.6 365 71.0
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.3e-140 503.8 391 67.8
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 1.7e-140 503.4 370 70.3
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 1.7e-140 503.4 322 79.2
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 3.8e-140 502.3 358 72.9
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 3.8e-140 502.3 436 62.8
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 7.2e-139 498.0 317 79.8
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 9.5e-139 497.7 299 80.9
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 2.1e-138 496.5 308 82.5
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 3.6e-138 495.7 312 79.5
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.0e-137 494.2 302 81.8
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 1.4e-137 493.8 321 76.3
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.8e-137 493.4 360 71.7
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.8e-137 493.4 360 71.7
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 3.0e-137 492.7 299 81.9
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 6.8e-137 491.5 325 76.3
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.0e-136 490.0 311 79.4
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 4.4e-136 488.8 348 74.4
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 9.8e-136 487.6 300 81.7
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 1.7e-135 486.9 299 81.3
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 2.4e-134 483.0 321 75.4
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 4.1e-134 482.3 333 73.6
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 9.2e-134 481.1 333 75.4
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 5.9e-133 478.4 284 83.8
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 6.6e-132 474.9 284 84.2
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 8.0e-130 468.0 289 81.0
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 5.2e-129 465.3 363 70.2
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 5.2e-129 465.3 359 69.9
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 7.5e-120 434.9 305 71.5
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 4.7e-114 415.6 349 62.2
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 1.7e-103 380.6 256 76.2
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 1.6e-101 374.0 250 77.2
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 3.5e-101 372.9 289 63.7
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 9.6e-99 364.8 230 82.6
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 2.1e-98 363.6 264 73.1
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 3.1e-81 306.6 187 82.9
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 4.1e-73 279.6 271 59.4
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 1.3e-71 274.6 366 45.4
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 1.3e-66 258.1 204 69.1
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 7.7e-64 248.8 339 45.7
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 1.7e-47 194.5 112 82.1
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 2.6e-43 180.6 113 77.9
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 9.4e-38 162.2 188 54.3
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 1.2e-37 161.8 170 57.6
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 1.2e-37 161.8 170 57.6
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 1.3e-34 151.8 283 35.7
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 1.3e-31 141.7 101 70.3
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 8.5e-31 139.0 99 71.7
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 8.5e-31 139.0 99 71.7
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 1.1e-30 138.7 98 71.4
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 5.5e-30 136.3 99 70.7
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 4.7e-29 133.3 103 67.0
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 1.5e-27 128.3 104 62.5
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 2.2e-26 124.4 103 62.1
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 1.3e-18 98.6 64 73.4
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.5e-14 85.1 49 83.7
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.9e-14 84.7 73 65.8
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 4.3e-14 83.6 67 70.1
C05p24790 Brassica napus HOM05D003055 ORTHO05D013026 1.5e-06 58.5 35 77.1


User provided reference genes

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