Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0730G017 Amborella trichopoda HOM05D001734 ORTHO05D003483 6.9e-273 943.3 472 100.0
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 1.6e-139 500.4 452 56.6
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 7.0e-132 474.9 453 52.8
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 9.1e-132 474.6 447 54.8
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 2.7e-131 473.0 450 54.0
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 3.8e-130 469.2 453 52.8
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 2.5e-129 466.5 480 50.2
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 1.2e-128 464.2 448 53.6
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 2.1e-128 463.4 451 52.5
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 4.0e-127 459.1 448 52.7
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 4.9e-125 452.2 452 51.1
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.1e-124 451.1 476 50.0
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.6e-123 447.2 452 52.2
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 3.5e-123 446.0 467 50.1
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 1.3e-122 444.1 478 48.3
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 5.0e-122 442.2 451 49.7
Gohir.A09G171650 Gossypium hirsutum HOM05D001734 ORTHO05D003483 2.8e-120 436.4 451 50.1
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 4.7e-120 435.6 451 49.4
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 1.4e-119 434.1 448 49.8
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 1.8e-119 433.7 451 49.9
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 1.8e-119 433.7 448 50.0
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.8e-119 433.7 451 49.7
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 2.3e-119 433.3 451 49.9
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 2.3e-119 433.3 451 49.7
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 8.9e-119 431.4 450 50.4
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 8.9e-119 431.4 477 48.0
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 2.0e-118 430.3 447 49.0
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 2.6e-118 429.9 447 50.3
vmacro19389 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 3.4e-118 429.5 481 47.4
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 4.4e-118 429.1 451 48.8
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 6.4e-117 425.2 451 48.8
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 8.3e-117 424.9 470 48.1
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 1.9e-116 423.7 448 49.1
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.9e-116 423.7 448 49.1
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 2.4e-116 423.3 477 48.2
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.2e-115 421.0 448 49.1
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.2e-115 421.0 447 48.8
Ca_16175_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 2.7e-115 419.9 444 48.6
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 4.6e-115 419.1 483 46.6
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 3.9e-114 416.0 461 47.5
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 3.3e-113 412.9 464 46.6
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 2.1e-112 410.2 459 46.8
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 2.1e-112 410.2 483 46.0
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 2.8e-112 409.8 463 47.9
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 4.7e-112 409.1 448 46.4
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 1.1e-111 407.9 462 47.0
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 1.1e-111 407.9 465 46.5
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 1.4e-111 407.5 465 45.6
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 4.0e-111 406.0 470 46.4
CAN.G1305.20 Capsicum annuum HOM05D001734 ORTHO05D003483 2.9e-109 399.8 498 44.4
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 1.9e-108 397.1 458 45.9
FAN05G0227 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.5e-107 392.9 425 48.0
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 2.3e-106 390.2 451 45.9
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 3.0e-106 389.8 450 45.6
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 3.9e-106 389.4 451 46.1
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 3.3e-105 386.3 469 44.8
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 6.2e-104 382.1 450 44.0
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 1.5e-102 377.5 451 44.8
PSO732G0258 Papaver somniferum HOM05D001734 ORTHO05D003483 3.4e-102 376.3 387 51.2
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 7.5e-102 375.2 462 43.3
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 8.3e-101 371.7 451 43.2
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 3.2e-100 369.8 450 43.8
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 3.2e-100 369.8 450 43.8
VMungo1309G1926 Vigna mungo HOM05D000002 ORTHO05D000001 8.6e-98 361.7 502 41.4
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 3.3e-97 359.8 473 43.3
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 2.1e-96 357.1 392 46.9
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 2.8e-96 356.7 467 44.3
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 1.5e-94 350.9 443 42.4
Lj9A448T39 Lonicera japonica HOM05D001734 ORTHO05D003483 2.0e-94 350.5 425 45.6
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 4.4e-94 349.4 435 43.7
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 3.2e-92 343.2 381 47.0
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 2.1e-91 340.5 436 42.2
Cpa.g.sc1166.1 Carica papaya HOM05D001734 ORTHO05D003483 3.9e-90 336.3 372 49.2
Lalb_Chr08g0236521 Lupinus albus HOM05D001734 ORTHO05D003483 3.9e-90 336.3 387 47.0
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 2.1e-88 330.5 429 41.5
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 2.1e-88 330.5 335 51.3
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 6.2e-88 328.9 451 38.6
Hund02745 Selenicereus undatus HOM05D001734 ORTHO05D003483 1.4e-87 327.8 353 51.6
TPR.G6095 Trifolium pratense HOM05D001734 ORTHO05D003483 1.6e-83 314.3 361 46.8
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 8.7e-82 308.5 453 35.8
CDE07G0247 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 1.2e-78 298.1 284 52.1
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 2.2e-77 293.9 461 36.9
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 8.4e-77 292.0 486 37.0
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 3.2e-76 290.0 299 50.2
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 1.6e-75 287.7 374 41.2
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 3.9e-74 283.1 306 50.7
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 6.9e-71 272.3 449 37.0
SEGI_17988 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 3.4e-70 270.0 338 44.4
Nitab4.5_0000984g0080 Nicotiana tabacum HOM05D001734 ORTHO05D003483 7.4e-65 252.3 322 44.1
Migut.C00312 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.5e-57 227.3 356 40.2
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 5.5e-44 183.0 219 43.8
Rhsim06G0125200 Rhododendron simsii HOM05D001734 ORTHO05D003483 9.7e-41 172.2 256 40.6
COL.COLO4_30229 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.3e-40 171.8 212 45.8
SHI17017 Sapria himalayana HOM05D001734 ORTHO05D003483 4.7e-35 153.3 233 38.2
Rhsim02G0151200 Rhododendron simsii HOM05D001734 ORTHO05D003483 3.8e-29 133.7 253 35.2
CBR_g286 Chara braunii HOM05D000004 ORTHO05D000002 2.5e-28 131.0 227 36.1
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.7e-24 118.2 172 38.4
arahy.Tifrunner.gnm1.ann1.1I6Y5K Arachis hypogaea HOM05D001734 ORTHO05D003483 2.2e-21 107.8 114 48.2
SEGI_06250 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 1.9e-20 104.8 101 48.5
SHI17018 Sapria himalayana HOM05D000105 ORTHO05D000023 9.4e-20 102.4 143 39.2
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 1.2e-19 102.1 142 38.0
Rhsim06G0125100 Rhododendron simsii HOM05D001734 ORTHO05D003483 6.1e-19 99.8 112 48.2
arahy.Tifrunner.gnm1.ann1.BK2P93 Arachis hypogaea HOM05D001734 ORTHO05D003483 8.3e-16 89.4 185 35.1
TPR.G5903 Trifolium pratense HOM05D001734 ORTHO05D003483 1.8e-15 88.2 91 45.1
arahy.Tifrunner.gnm1.ann1.EMU6Q2 Arachis hypogaea HOM05D001734 ORTHO05D003483 1.0e-13 82.4 115 40.0
TPR.G21158 Trifolium pratense HOM05D001734 ORTHO05D003483 3.8e-13 80.5 73 52.1
MD14G1180200 Malus domestica HOM05D001734 ORTHO05D003483 2.5e-12 77.8 94 43.6
TPR.G5917 Trifolium pratense HOM05D001734 ORTHO05D003483 3.5e-06 57.4 64 40.6


User provided reference genes

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