Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 3.1e-90 335.1 171 100.0
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.9e-63 246.1 170 75.3
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 9.5e-63 243.8 166 72.9
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 1.2e-62 243.4 167 74.3
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 1.6e-62 243.0 167 73.7
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 1.1e-61 240.4 170 70.6
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 3.1e-61 238.8 167 72.5
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 5.2e-61 238.0 169 71.6
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 1.2e-60 236.9 170 71.2
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 1.5e-60 236.5 167 70.7
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 1.5e-60 236.5 167 71.3
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 2.0e-60 236.1 167 71.9
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 2.6e-60 235.7 170 67.6
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 4.4e-60 235.0 167 73.1
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 4.4e-60 235.0 169 71.0
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 5.8e-60 234.6 167 70.7
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 5.8e-60 234.6 170 69.4
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 2.2e-59 232.6 170 67.6
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 2.2e-59 232.6 167 70.1
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 2.2e-59 232.6 167 70.1
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 3.7e-59 231.9 167 70.7
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 3.7e-59 231.9 167 68.9
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 3.7e-59 231.9 169 70.4
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 8.3e-59 230.7 167 70.1
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.9e-58 229.6 170 69.4
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 1.9e-58 229.6 167 70.1
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 2.4e-58 229.2 167 66.5
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 5.4e-58 228.0 170 69.4
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 1.2e-57 226.9 167 67.7
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 1.2e-57 226.9 170 67.6
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 1.6e-57 226.5 169 66.9
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 2.7e-57 225.7 167 66.5
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 7.8e-57 224.2 167 68.3
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 7.8e-57 224.2 167 68.3
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 1.0e-56 223.8 167 68.3
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 1.0e-56 223.8 167 68.3
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.7e-56 223.0 170 65.3
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.0e-56 222.2 167 67.7
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 3.0e-56 222.2 170 67.6
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 3.9e-56 221.9 170 64.7
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 6.6e-56 221.1 167 66.5
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 8.6e-56 220.7 167 66.5
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 8.6e-56 220.7 167 66.5
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 1.1e-55 220.3 167 66.5
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 2.8e-54 215.7 170 64.7
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 2.8e-54 215.7 167 62.3
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 3.6e-54 215.3 167 64.1
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 4.7e-54 214.9 167 64.7
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 4.7e-54 214.9 167 63.5
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 6.2e-54 214.5 167 64.1
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 8.1e-54 214.2 173 63.0
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 1.4e-53 213.4 168 64.3
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 1.4e-53 213.4 167 62.9
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 1.4e-53 213.4 170 65.9
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.8e-53 213.0 170 65.9
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.3e-53 212.6 170 63.5
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 2.3e-53 212.6 170 62.4
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 3.1e-53 212.2 170 65.9
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 4.0e-53 211.8 168 64.9
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 4.0e-53 211.8 167 63.5
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 5.2e-53 211.5 170 62.9
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 5.2e-53 211.5 167 63.5
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 6.8e-53 211.1 167 63.5
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 8.9e-53 210.7 168 63.1
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 8.9e-53 210.7 166 63.3
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 8.9e-53 210.7 169 63.3
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 1.2e-52 210.3 167 62.3
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 1.5e-52 209.9 167 62.3
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 3.4e-52 208.8 168 62.5
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 3.4e-52 208.8 168 61.9
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 7.6e-52 207.6 168 61.9
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 7.6e-52 207.6 168 61.9
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 7.6e-52 207.6 168 61.9
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 7.6e-52 207.6 168 61.3
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 1.7e-51 206.5 167 61.7
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 2.9e-51 205.7 170 63.5
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 3.7e-51 205.3 167 62.9
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.4e-50 203.4 168 61.3
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 3.2e-50 202.2 167 59.9
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 7.1e-50 201.1 167 59.9
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 7.1e-50 201.1 164 63.4
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 7.1e-50 201.1 133 73.7
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 9.2e-50 200.7 172 59.3
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 1.2e-49 200.3 168 63.1
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.2e-49 200.3 168 59.5
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 7.8e-49 197.6 228 50.9
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 3.0e-48 195.7 167 58.7
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 9.6e-47 190.7 167 62.9
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 8.1e-46 187.6 161 60.2
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 4.0e-45 185.3 145 64.1
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 4.0e-45 185.3 170 61.8
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 1.2e-44 183.7 171 55.0
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 2.6e-44 182.6 139 69.1
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 4.4e-44 181.8 171 53.8
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 5.8e-44 181.4 167 57.5
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 2.9e-43 179.1 160 56.9
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 2.1e-41 172.9 175 54.9
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.1e-41 172.9 171 52.6
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 2.1e-41 172.9 166 57.8
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.7e-41 172.6 146 62.3
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 2.7e-41 172.6 144 62.5
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 8.7e-40 167.5 140 61.4
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 4.3e-39 165.2 171 48.5
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 1.3e-38 163.7 133 63.9
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 8.1e-38 161.0 173 54.3
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 2.6e-36 156.0 174 45.4
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 4.8e-30 135.2 191 38.7
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 3.5e-25 119.0 146 47.3
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 7.4e-23 111.3 93 59.1
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 1.1e-18 97.4 144 41.7
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 7.6e-12 74.7 48 70.8
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 2.5e-10 69.7 167 29.9
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 1.0e-08 64.3 197 27.9
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 4.8e-06 55.5 27 92.6


User provided reference genes

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