Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 0.0e+00 2197.5 1438 100.0
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 4.0e-162 577.0 1264 41.0
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 1.5e-161 575.1 933 43.7
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 7.3e-156 556.2 1247 38.5
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 9.5e-156 555.8 1259 38.4
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 4.7e-155 553.5 1247 39.1
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 3.1e-154 550.8 1270 38.6
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 3.1e-154 550.8 1263 38.6
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 2.4e-151 541.2 1299 35.2
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 7.3e-148 529.6 1249 39.1
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 2.1e-147 528.1 1037 40.3
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 3.6e-147 527.3 1304 37.3
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 1.4e-146 525.4 1271 38.6
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 6.8e-146 523.1 1239 40.1
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 6.8e-146 523.1 1255 39.6
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 6.8e-146 523.1 1251 39.2
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 2.0e-145 521.5 1257 37.3
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 3.4e-145 520.8 1293 38.4
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.7e-144 518.5 1294 37.2
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 4.9e-144 516.9 1244 36.4
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 6.4e-144 516.5 1244 38.5
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 8.3e-144 516.2 1257 38.7
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.1e-143 515.8 1257 39.1
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.4e-143 515.4 1273 38.3
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 3.2e-143 514.2 1227 38.6
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 2.7e-142 511.1 1212 37.3
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 1.0e-141 509.2 1021 39.4
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 3.0e-141 507.7 1024 39.6
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 6.6e-141 506.5 1241 38.4
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.5e-140 505.4 1292 35.4
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.5e-140 505.4 1234 38.8
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 2.5e-140 504.6 1299 37.3
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 4.3e-140 503.8 1237 36.1
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 1.6e-139 501.9 1283 35.5
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 1.6e-139 501.9 983 39.0
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 2.1e-139 501.5 1237 37.1
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 8.1e-139 499.6 1218 37.3
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 1.2e-137 495.7 1234 37.5
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 2.6e-137 494.6 1239 37.1
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 4.4e-137 493.8 1283 35.6
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 4.4e-137 493.8 937 39.3
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 8.4e-136 489.6 987 37.4
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 2.4e-135 488.0 1248 37.7
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 2.7e-134 484.6 1247 36.5
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 7.8e-134 483.0 1245 37.3
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 8.7e-133 479.6 1249 36.7
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 1.9e-132 478.4 1043 37.5
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 2.5e-132 478.0 1262 35.8
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 3.3e-132 477.6 1262 35.6
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 5.6e-132 476.9 806 42.3
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 7.3e-132 476.5 1181 37.0
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 1.2e-131 475.7 1249 36.7
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 1.2e-131 475.7 1224 36.5
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 1.6e-131 475.3 1255 35.4
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 6.2e-131 473.4 1236 35.8
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 1.4e-130 472.2 1253 35.4
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 1.4e-130 472.2 1233 36.1
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 2.4e-130 471.5 1245 36.0
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 5.3e-130 470.3 882 38.4
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 6.9e-130 469.9 1267 35.9
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 1.5e-129 468.8 1225 35.6
TAR622G0522 Trochodendron aralioides HOM05D001849 ORTHO05D004075 2.6e-129 468.0 1005 36.1
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 5.8e-129 466.8 1243 35.9
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 9.9e-129 466.1 1040 36.6
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 4.9e-128 463.8 968 37.6
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 2.4e-127 461.5 1253 36.0
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 5.4e-127 460.3 964 38.0
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 5.4e-127 460.3 955 37.9
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 1.6e-126 458.8 1220 35.9
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 2.7e-126 458.0 1213 34.5
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 4.6e-126 457.2 1235 35.7
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 5.6e-124 450.3 1249 35.1
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 9.6e-124 449.5 1234 36.2
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 1.6e-123 448.7 1261 36.1
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 6.2e-123 446.8 1249 34.0
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 9.0e-122 443.0 1225 34.4
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 1.2e-121 442.6 1069 36.7
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 1.5e-121 442.2 1229 35.4
Nn3g17987 Nelumbo nucifera HOM05D001849 ORTHO05D004075 2.9e-120 438.0 1021 36.9
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 3.8e-120 437.6 1240 33.5
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 4.2e-119 434.1 909 39.1
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 1.2e-118 432.6 1257 33.7
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 2.1e-118 431.8 1012 35.9
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 7.9e-118 429.9 1235 35.8
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 4.3e-116 424.1 1017 35.9
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 2.8e-115 421.4 1237 33.5
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 1.8e-114 418.7 979 36.0
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 3.4e-113 414.5 1237 34.9
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 4.5e-113 414.1 1239 33.7
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 7.6e-113 413.3 1240 35.6
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 6.7e-109 400.2 1236 34.1
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 8.7e-109 399.8 1228 34.0
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 3.3e-108 397.9 1225 33.7
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 4.3e-108 397.5 1226 33.8
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 7.4e-108 396.7 1239 33.5
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 6.2e-107 393.7 1239 35.3
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 6.2e-107 393.7 1237 33.7
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 5.3e-106 390.6 1326 31.2
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 1.0e-104 386.3 1063 37.6
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 3.8e-104 384.4 1024 34.9
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 1.1e-103 382.9 1233 33.9
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 5.5e-103 380.6 1217 33.7
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 9.3e-103 379.8 948 41.8
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 1.1e-100 372.9 1214 32.8
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 3.3e-100 371.3 1198 32.5
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 3.3e-100 371.3 1219 32.4
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 3.3e-100 371.3 1223 32.5
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 2.8e-99 368.2 1215 32.3
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 2.8e-99 368.2 1215 32.3
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 3.7e-99 367.9 1215 32.4
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 3.7e-99 367.9 940 34.8
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 1.4e-98 365.9 1121 32.3
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 3.4e-97 361.3 1241 33.8
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 4.6e-94 350.9 1007 33.5
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 1.0e-93 349.7 1223 33.4
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 1.4e-93 349.4 1014 33.7
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 3.9e-93 347.8 795 35.2
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 7.4e-92 343.6 1272 32.2
Zm00001eb203360 Zea mays HOM05D001849 ORTHO05D004075 8.2e-91 340.1 1208 30.0
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 6.9e-90 337.0 842 34.1
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.4e-85 322.8 962 31.1
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 1.3e-83 316.2 515 41.9
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 9.1e-82 310.1 894 34.7
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 2.0e-76 292.4 1061 32.5
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 1.3e-75 289.7 879 33.7
Dinv16157 Davidia involucrata HOM05D001849 ORTHO05D004075 4.7e-70 271.2 991 29.6
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 1.0e-69 270.0 284 49.6
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 1.4e-66 259.6 931 32.2
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 4.2e-63 248.1 675 35.3
Actinidia14933 Actinidia chinensis HOM05D001849 ORTHO05D004075 2.7e-62 245.4 1000 28.1
Prupe.1G319400 Prunus persica HOM05D001849 ORTHO05D004075 6.8e-61 240.7 923 28.3
QL01p003145 Quercus lobata HOM05D001849 ORTHO05D004075 7.5e-60 237.3 922 26.7
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 5.5e-55 221.1 743 32.7
Mapoly0055s0059 Marchantia polymorpha HOM05D001849 ORTHO05D004075 5.5e-55 221.1 999 26.3
Rhsim09G0102300 Rhododendron simsii HOM05D001849 ORTHO05D004075 5.5e-55 221.1 1000 27.2
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 9.5e-55 220.3 417 38.1
Dinv04913 Davidia involucrata HOM05D001849 ORTHO05D004075 2.2e-51 209.1 856 28.4
Atru.chr11.324 Acer truncatum HOM05D001849 ORTHO05D004075 1.4e-50 206.5 426 34.0
Cfa015821 Carpinus fangiana HOM05D001849 ORTHO05D004075 2.4e-50 205.7 284 42.6
Pp3c3_3510 Physcomitrium patens HOM05D001849 ORTHO05D004075 1.3e-48 199.9 1057 26.4
CANSAT01G2891 Cannabis sativa HOM05D001849 ORTHO05D004075 7.3e-47 194.1 979 26.8
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 7.3e-47 194.1 315 41.3
Pp3c13_8340 Physcomitrium patens HOM05D001849 ORTHO05D004075 9.5e-47 193.7 1043 25.6
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis HOM05D001849 ORTHO05D004075 1.2e-46 193.4 909 27.0
CSS0014980 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 1.5e-44 186.4 692 27.9
Medtr8g106435 Medicago truncatula HOM05D001849 ORTHO05D004075 2.6e-44 185.7 509 33.0
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 4.4e-44 184.9 1048 27.5
TAR626G0936 Trochodendron aralioides HOM05D001849 ORTHO05D004075 4.4e-44 184.9 211 50.7
vmacro15055 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 4.9e-43 181.4 203 49.3
Haze_00674 Corylus avellana HOM05D001849 ORTHO05D004075 8.3e-43 180.6 384 33.9
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 1.4e-42 179.9 1013 26.9
Lj6A751T55 Lonicera japonica HOM05D001849 ORTHO05D004075 1.2e-38 166.8 191 45.5
HanXRQChr04g0094421 Helianthus annuus HOM05D001849 ORTHO05D004075 3.2e-34 152.1 198 43.4
CiPaw.05G244500 Carya illinoinensis HOM05D001849 ORTHO05D004075 2.3e-32 146.0 685 26.0
CBR_g31688 Chara braunii HOM05D001849 ORTHO05D004075 4.4e-28 131.7 346 28.6
Manes.14G108850 Manihot esculenta HOM05D001849 ORTHO05D004075 7.1e-26 124.4 849 23.8
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 2.1e-25 122.9 274 33.9
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 6.8e-21 107.8 440 29.5
Haze_16071 Corylus avellana HOM05D001849 ORTHO05D004075 1.2e-17 97.1 389 28.0
SHI29648 Sapria himalayana HOM05D001849 ORTHO05D004075 7.8e-17 94.4 84 57.1
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 3.9e-16 92.0 234 35.5
SHI29649 Sapria himalayana HOM05D001849 ORTHO05D004075 3.6e-14 85.5 373 28.4
vmacro10614 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 8.1e-14 84.3 88 48.9
MCO11G122 Micromonas commoda HOM05D001849 ORTHO05D004075 1.2e-12 80.5 95 43.2
SEGI_04298 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 2.6e-12 79.3 125 36.0
Medtr8g106415 Medicago truncatula HOM05D001849 ORTHO05D004075 4.4e-12 78.6 89 48.3
BcaB03g14986 Brassica carinata HOM05D001849 ORTHO05D004075 9.9e-12 77.4 145 37.2
SHI29650 Sapria himalayana HOM05D001849 ORTHO05D004075 1.1e-10 73.9 134 35.1
Manes.06G063600 Manihot esculenta HOM05D001849 ORTHO05D004075 1.9e-10 73.2 72 54.2
Cpa.g.sc25.149 Carica papaya HOM05D020865 ORTHO05D004075 2.4e-10 72.8 125 34.4
CDE07G0363 Ceratophyllum demersum HOM05D002703 ORTHO05D002921 6.0e-09 68.2 65 52.3
SEGI_02030 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 4.3e-07 62.0 61 47.5
MBI19_g29884_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 8.1e-06 57.8 32 87.5


User provided reference genes

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